RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 LCE3CQ5T5A8 94 aa6.13□□□□□ -1.43
CDK11A-209ENST00000460465 SPRR2FQ96RM1 72 aa6.11□□□□□ -1.43
CDK11A-209ENST00000460465 KRTAP19-4Q3LI73 84 aa6.04□□□□□ -1.44
CDK11A-209ENST00000460465 KRTAP4-7Q9BYR0 210 aa6.02□□□□□ -1.45
CDK11A-209ENST00000460465 SYNE2Q8WXH0 6885 aaKnown RBP6.01□□□□□ -1.45
CDK11A-209ENST00000460465 KRTAP19-3Q7Z4W3 81 aa6.01□□□□□ -1.45
CDK11A-209ENST00000460465 MUC12Q9UKN1 5478 aa6□□□□□ -1.45
CDK11A-209ENST00000460465 KRTAP5-9P26371 169 aa5.99□□□□□ -1.45
CDK11A-209ENST00000460465 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.97□□□□□ -1.45
CDK11A-209ENST00000460465 MT1GP13640 62 aa5.94□□□□□ -1.46
CDK11A-209ENST00000460465 MT1MQ8N339 61 aa5.91□□□□□ -1.46
CDK11A-209ENST00000460465 LCE5AQ5TCM9 118 aa5.89□□□□□ -1.47
CDK11A-209ENST00000460465 KRTAP6-3Q3LI67 103 aa5.84□□□□□ -1.47
CDK11A-209ENST00000460465 KRTAP4-3Q9BYR4 195 aa5.84□□□□□ -1.47
CDK11A-209ENST00000460465 KRTAP9-6A8MVA2 160 aa5.83□□□□□ -1.48
CDK11A-209ENST00000460465 LCE1AQ5T7P2 110 aa5.82□□□□□ -1.48
CDK11A-209ENST00000460465 SPRR2EP22531 72 aa5.78□□□□□ -1.48
CDK11A-209ENST00000460465 SPRR2BP35325 72 aa5.78□□□□□ -1.48
CDK11A-209ENST00000460465 SPRR2AP35326 72 aa5.78□□□□□ -1.48
CDK11A-209ENST00000460465 MDN1Q9NU22 5596 aa5.73□□□□□ -1.49
CDK11A-209ENST00000460465 LOC100996750A0A140TA64 210 aa5.65□□□□□ -1.5
CDK11A-209ENST00000460465 KRTAP9-7A8MTY7 169 aa5.61□□□□□ -1.51
CDK11A-209ENST00000460465 SPRR2DP22532 72 aa5.56□□□□□ -1.52
CDK11A-209ENST00000460465 DSTQ03001 7570 aaKnown RBP5.54□□□□□ -1.52
CDK11A-209ENST00000460465 NEBP20929 6669 aa5.41□□□□□ -1.54
CDK11A-209ENST00000460465 KRTAP2-3P0C7H8 128 aa5.38□□□□□ -1.55
CDK11A-209ENST00000460465 KRTAP2-4Q9BYR9 128 aa5.38□□□□□ -1.55
CDK11A-209ENST00000460465 KRTAP2-1Q9BYU5 128 aa5.38□□□□□ -1.55
CDK11A-209ENST00000460465 LCE3BQ5TA77 95 aa5.33□□□□□ -1.56
CDK11A-209ENST00000460465 KRTAP5-5Q701N2 237 aaPredicted RBP5.31□□□□□ -1.56
CDK11A-209ENST00000460465 MT1AP04731 61 aa5.23□□□□□ -1.57
CDK11A-209ENST00000460465 KRTAP6-1Q3LI64 71 aa5.21□□□□□ -1.58
CDK11A-209ENST00000460465 KRTAP2-2Q9BYT5 123 aa5.06□□□□□ -1.6
CDK11A-209ENST00000460465 KRTAP5-4Q6L8H1 288 aa5.02□□□□□ -1.61
CDK11A-209ENST00000460465 SYNE1Q8NF91 8797 aaKnown RBP4.99□□□□□ -1.61
CDK11A-209ENST00000460465 KRTAP20-1Q3LI63 56 aa4.98□□□□□ -1.61
CDK11A-209ENST00000460465 KRTAP9-4Q9BYQ2 154 aa4.96□□□□□ -1.61
CDK11A-209ENST00000460465 LCE4AQ5TA78 99 aa4.9□□□□□ -1.63
CDK11A-209ENST00000460465 KRTAP12-4P60329 112 aa4.89□□□□□ -1.63
CDK11A-209ENST00000460465 MT4P47944 62 aa4.84□□□□□ -1.63
CDK11A-209ENST00000460465 KRTAP4-9Q9BYQ8 210 aa4.83□□□□□ -1.64
CDK11A-209ENST00000460465 KRTAP4-6Q9BYQ5 205 aa4.81□□□□□ -1.64
CDK11A-209ENST00000460465 KRTAP6-2Q3LI66 62 aa4.78□□□□□ -1.64
CDK11A-209ENST00000460465 LCE1DQ5T752 114 aa4.73□□□□□ -1.65
CDK11A-209ENST00000460465 MT3P25713 68 aa4.72□□□□□ -1.65
CDK11A-209ENST00000460465 KRTAP20-2Q3LI61 65 aa4.71□□□□□ -1.66
CDK11A-209ENST00000460465 LCE3DQ9BYE3 92 aa4.61□□□□□ -1.67
CDK11A-209ENST00000460465 HMCN1Q96RW7 5635 aa4.61□□□□□ -1.67
CDK11A-209ENST00000460465 KRTAP5-2Q701N4 177 aa4.57□□□□□ -1.68
CDK11A-209ENST00000460465 KRTAP5-3Q6L8H2 238 aa4.52□□□□□ -1.69
CDK11A-209ENST00000460465 LCE3EQ5T5B0 92 aa4.49□□□□□ -1.69
CDK11A-209ENST00000460465 LCE1EQ5T753 118 aa4.47□□□□□ -1.69
CDK11A-209ENST00000460465 LCE1FQ5T754 118 aa4.4□□□□□ -1.7
CDK11A-209ENST00000460465 OBSCNQ5VST9 7968 aa4.34□□□□□ -1.72
CDK11A-209ENST00000460465 GPR98Q8WXG9 6306 aa4.26□□□□□ -1.73
CDK11A-209ENST00000460465 PRM1P04553 51 aa4.16□□□□□ -1.74
CDK11A-209ENST00000460465 KRTAP4-11Q9BYQ6 195 aa4.05□□□□□ -1.76
CDK11A-209ENST00000460465 AHNAK2Q8IVF2 5795 aa4.04□□□□□ -1.76
CDK11A-209ENST00000460465 KRTAP5-1Q6L8H4 278 aa3.95□□□□□ -1.78
CDK11A-209ENST00000460465 KRTAP5-8O75690 187 aa3.9□□□□□ -1.78
CDK11A-209ENST00000460465 LCE1BQ5T7P3 118 aa3.87□□□□□ -1.79
CDK11A-209ENST00000460465 KRTAP5-10Q6L8G5 202 aa3.86□□□□□ -1.79
CDK11A-209ENST00000460465 KRTAP4-2Q9BYR5 136 aa3.82□□□□□ -1.8
CDK11A-209ENST00000460465 MUC5ACP98088 5654 aa3.81□□□□□ -1.8
CDK11A-209ENST00000460465 LCE1CQ5T751 118 aa3.79□□□□□ -1.8
CDK11A-209ENST00000460465 KRTAP9-9Q9BYP9 154 aa3.79□□□□□ -1.8
CDK11A-209ENST00000460465 KRTAP5-7Q6L8G8 165 aa3.78□□□□□ -1.8
CDK11A-209ENST00000460465 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.55□□□□□ -1.84
CDK11A-209ENST00000460465 KRTAP4-12Q9BQ66 201 aa3.49□□□□□ -1.85
CDK11A-209ENST00000460465 KRTAP21-2Q3LI59 83 aa3.39□□□□□ -1.87
CDK11A-209ENST00000460465 KRTAP5-11Q6L8G4 156 aa3.35□□□□□ -1.87
CDK11A-209ENST00000460465 MUC5BQ9HC84 5762 aaPredicted RBP3.28□□□□□ -1.88
CDK11A-209ENST00000460465 AHNAKQ09666 5890 aaKnown RBP3.28□□□□□ -1.88
CDK11A-209ENST00000460465 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
CDK11A-209ENST00000460465 PHGR1C9JFL3 82 aa2.87□□□□□ -1.95
CDK11A-209ENST00000460465 KRTAP21-1Q3LI58 79 aa2.71□□□□□ -1.98
CDK11A-209ENST00000460465 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
CDK11A-209ENST00000460465 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 67.2 ms