RNA–Protein interactions for RNA: ENST00000460431.1

SMARCD3-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-204ENST00000460431 LCE3AQ5TA76 89 aa5.97□□□□□ -1.45
SMARCD3-204ENST00000460431 KRTAP23-1A1A580 65 aa5.96□□□□□ -1.46
SMARCD3-204ENST00000460431 PSPHP1O15172 72 aa5.94□□□□□ -1.46
SMARCD3-204ENST00000460431 MT1GP13640 62 aa5.93□□□□□ -1.46
SMARCD3-204ENST00000460431 DSTQ03001 7570 aaKnown RBP5.88□□□□□ -1.47
SMARCD3-204ENST00000460431 KRTAP4-9Q9BYQ8 210 aa5.87□□□□□ -1.47
SMARCD3-204ENST00000460431 MT1LQ93083 61 aa5.86□□□□□ -1.47
SMARCD3-204ENST00000460431 PP632Q6XCG6 107 aa5.85□□□□□ -1.47
SMARCD3-204ENST00000460431 K7ERS5 55 aa5.84□□□□□ -1.47
SMARCD3-204ENST00000460431 MT1MQ8N339 61 aa5.81□□□□□ -1.48
SMARCD3-204ENST00000460431 RPS28P62857 69 aaKnown RBP5.78□□□□□ -1.48
SMARCD3-204ENST00000460431 KRTAP25-1Q3LHN0 102 aa5.78□□□□□ -1.48
SMARCD3-204ENST00000460431 KRTAP12-3P60328 96 aa5.75□□□□□ -1.49
SMARCD3-204ENST00000460431 A6NED7 52 aa5.74□□□□□ -1.49
SMARCD3-204ENST00000460431 GPR98Q8WXG9 6306 aa5.73□□□□□ -1.49
SMARCD3-204ENST00000460431 LCE1DQ5T752 114 aa5.71□□□□□ -1.5
SMARCD3-204ENST00000460431 KRTAP4-3Q9BYR4 195 aa5.66□□□□□ -1.5
SMARCD3-204ENST00000460431 LCE4AQ5TA78 99 aa5.65□□□□□ -1.5
SMARCD3-204ENST00000460431 MT4P47944 62 aa5.61□□□□□ -1.51
SMARCD3-204ENST00000460431 KRTAP4-7Q9BYR0 210 aa5.58□□□□□ -1.52
SMARCD3-204ENST00000460431 HMCN1Q96RW7 5635 aa5.56□□□□□ -1.52
SMARCD3-204ENST00000460431 KRTAP5-4Q6L8H1 288 aa5.55□□□□□ -1.52
SMARCD3-204ENST00000460431 CDC42SE1Q9NRR8 79 aa5.55□□□□□ -1.52
SMARCD3-204ENST00000460431 ROMO1P60602 79 aa5.48□□□□□ -1.53
SMARCD3-204ENST00000460431 KRTAP19-4Q3LI73 84 aa5.48□□□□□ -1.53
SMARCD3-204ENST00000460431 KRTAP4-6Q9BYQ5 205 aa5.47□□□□□ -1.53
SMARCD3-204ENST00000460431 KRTAP15-1Q3LI76 137 aa5.43□□□□□ -1.54
SMARCD3-204ENST00000460431 AHNAK2Q8IVF2 5795 aa5.41□□□□□ -1.54
SMARCD3-204ENST00000460431 KRTAP5-10Q6L8G5 202 aa5.4□□□□□ -1.54
SMARCD3-204ENST00000460431 KRTAP5-5Q701N2 237 aaPredicted RBP5.33□□□□□ -1.56
SMARCD3-204ENST00000460431 LCE3CQ5T5A8 94 aa5.32□□□□□ -1.56
SMARCD3-204ENST00000460431 LOC100996750A0A140TA64 210 aa5.28□□□□□ -1.56
SMARCD3-204ENST00000460431 KRTAP5-3Q6L8H2 238 aa5.24□□□□□ -1.57
SMARCD3-204ENST00000460431 KRTAP20-2Q3LI61 65 aa5.23□□□□□ -1.57
SMARCD3-204ENST00000460431 KRTAP5-7Q6L8G8 165 aa5.21□□□□□ -1.58
SMARCD3-204ENST00000460431 SPRR5A0A1B0GTR4 108 aa5.19□□□□□ -1.58
SMARCD3-204ENST00000460431 KRTAP12-4P60329 112 aa5.15□□□□□ -1.59
SMARCD3-204ENST00000460431 SYNE1Q8NF91 8797 aaKnown RBP5.11□□□□□ -1.59
SMARCD3-204ENST00000460431 BRK1Q8WUW1 75 aa5.05□□□□□ -1.6
SMARCD3-204ENST00000460431 PRAC1Q96KF2 57 aa5.04□□□□□ -1.6
SMARCD3-204ENST00000460431 KRTAP9-6A8MVA2 160 aa5.02□□□□□ -1.61
SMARCD3-204ENST00000460431 MT1AP04731 61 aa5□□□□□ -1.61
SMARCD3-204ENST00000460431 KRTAP6-1Q3LI64 71 aa4.96□□□□□ -1.62
SMARCD3-204ENST00000460431 KRTAP5-2Q701N4 177 aa4.83□□□□□ -1.64
SMARCD3-204ENST00000460431 KRTAP9-4Q9BYQ2 154 aa4.83□□□□□ -1.64
SMARCD3-204ENST00000460431 KRTAP4-11Q9BYQ6 195 aa4.82□□□□□ -1.64
SMARCD3-204ENST00000460431 PMAIP1Q13794 54 aa4.77□□□□□ -1.65
SMARCD3-204ENST00000460431 KRTAP6-2Q3LI66 62 aa4.71□□□□□ -1.66
SMARCD3-204ENST00000460431 KRTAP5-8O75690 187 aa4.68□□□□□ -1.66
SMARCD3-204ENST00000460431 MT3P25713 68 aa4.57□□□□□ -1.68
SMARCD3-204ENST00000460431 NDUFAF8A1L188 74 aa4.51□□□□□ -1.69
SMARCD3-204ENST00000460431 MUC5ACP98088 5654 aa4.5□□□□□ -1.69
SMARCD3-204ENST00000460431 PRO0628Q9UI54 55 aa4.49□□□□□ -1.69
SMARCD3-204ENST00000460431 OBSCNQ5VST9 7968 aa4.48□□□□□ -1.69
SMARCD3-204ENST00000460431 AHNAKQ09666 5890 aaKnown RBP4.47□□□□□ -1.69
SMARCD3-204ENST00000460431 MUC5BQ9HC84 5762 aaPredicted RBP4.47□□□□□ -1.69
SMARCD3-204ENST00000460431 KRTAP9-9Q9BYP9 154 aa4.46□□□□□ -1.7
SMARCD3-204ENST00000460431 KRTAP5-1Q6L8H4 278 aa4.36□□□□□ -1.71
SMARCD3-204ENST00000460431 KRTAP4-12Q9BQ66 201 aa4.36□□□□□ -1.71
SMARCD3-204ENST00000460431 KTN1-AS1Q86SY8 53 aa4.26□□□□□ -1.73
SMARCD3-204ENST00000460431 LCE1EQ5T753 118 aa4.18□□□□□ -1.74
SMARCD3-204ENST00000460431 LUZP6Q538Z0 58 aa4.08□□□□□ -1.76
SMARCD3-204ENST00000460431 KRTAP4-2Q9BYR5 136 aa3.92□□□□□ -1.78
SMARCD3-204ENST00000460431 LCE1BQ5T7P3 118 aa3.89□□□□□ -1.79
SMARCD3-204ENST00000460431 LCE1CQ5T751 118 aa3.87□□□□□ -1.79
SMARCD3-204ENST00000460431 LCE3DQ9BYE3 92 aa3.86□□□□□ -1.79
SMARCD3-204ENST00000460431 LCE3EQ5T5B0 92 aa3.65□□□□□ -1.83
SMARCD3-204ENST00000460431 LCE1FQ5T754 118 aa3.65□□□□□ -1.83
SMARCD3-204ENST00000460431 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.55□□□□□ -1.84
SMARCD3-204ENST00000460431 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
SMARCD3-204ENST00000460431 KRTAP21-2Q3LI59 83 aa3.28□□□□□ -1.88
SMARCD3-204ENST00000460431 PHGR1C9JFL3 82 aa3.13□□□□□ -1.91
SMARCD3-204ENST00000460431 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
SMARCD3-204ENST00000460431 PRM1P04553 51 aa2.8□□□□□ -1.96
SMARCD3-204ENST00000460431 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
SMARCD3-204ENST00000460431 INE1O15225 51 aa2.76□□□□□ -1.97
SMARCD3-204ENST00000460431 KRTAP21-1Q3LI58 79 aa2.37□□□□□ -2.03
SMARCD3-204ENST00000460431 MUC16Q8WXI7 14507 aa2.03□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 53.5 ms