RNA–Protein interactions for RNA: ENST00000460427.2

ACTR1B-203, Transcript of ARP1 actin related protein 1 homolog B, humanhuman

TSL 2

Gene ACTR1B, Length 730 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR1B-203ENST00000460427 LINC01558Q9Y6Z2 57 aa7.1□□□□□ -1.27
ACTR1B-203ENST00000460427 KRTAP4-3Q9BYR4 195 aa7.08□□□□□ -1.28
ACTR1B-203ENST00000460427 MT4P47944 62 aa7.07□□□□□ -1.28
ACTR1B-203ENST00000460427 HMCN1Q96RW7 5635 aa6.99□□□□□ -1.29
ACTR1B-203ENST00000460427 UQCR11O14957 56 aa6.97□□□□□ -1.29
ACTR1B-203ENST00000460427 KRTAP5-4Q6L8H1 288 aa6.97□□□□□ -1.29
ACTR1B-203ENST00000460427 KRTAP12-3P60328 96 aa6.96□□□□□ -1.3
ACTR1B-203ENST00000460427 TMEM258P61165 79 aa6.94□□□□□ -1.3
ACTR1B-203ENST00000460427 KRTAP4-7Q9BYR0 210 aa6.89□□□□□ -1.31
ACTR1B-203ENST00000460427 KRTAP4-6Q9BYQ5 205 aa6.85□□□□□ -1.31
ACTR1B-203ENST00000460427 MIR22HGQ0VDD5 57 aa6.8□□□□□ -1.32
ACTR1B-203ENST00000460427 AHNAK2Q8IVF2 5795 aa6.78□□□□□ -1.32
ACTR1B-203ENST00000460427 KRTAP25-1Q3LHN0 102 aa6.78□□□□□ -1.32
ACTR1B-203ENST00000460427 K7ERS5 55 aa6.71□□□□□ -1.34
ACTR1B-203ENST00000460427 KRTAP5-10Q6L8G5 202 aa6.69□□□□□ -1.34
ACTR1B-203ENST00000460427 KRTAP5-5Q701N2 237 aaPredicted RBP6.65□□□□□ -1.34
ACTR1B-203ENST00000460427 V9GYY9 64 aa6.61□□□□□ -1.35
ACTR1B-203ENST00000460427 PSPHP1O15172 72 aa6.6□□□□□ -1.35
ACTR1B-203ENST00000460427 KRTAP20-2Q3LI61 65 aa6.59□□□□□ -1.35
ACTR1B-203ENST00000460427 KRTAP19-4Q3LI73 84 aa6.56□□□□□ -1.36
ACTR1B-203ENST00000460427 SPRR5A0A1B0GTR4 108 aa6.55□□□□□ -1.36
ACTR1B-203ENST00000460427 LOC100996750A0A140TA64 210 aa6.54□□□□□ -1.36
ACTR1B-203ENST00000460427 Q1T7F1 81 aa6.54□□□□□ -1.36
ACTR1B-203ENST00000460427 KRTAP23-1A1A580 65 aa6.52□□□□□ -1.37
ACTR1B-203ENST00000460427 KRTAP12-4P60329 112 aa6.52□□□□□ -1.37
ACTR1B-203ENST00000460427 KRTAP5-3Q6L8H2 238 aa6.52□□□□□ -1.37
ACTR1B-203ENST00000460427 KRTAP15-1Q3LI76 137 aa6.47□□□□□ -1.37
ACTR1B-203ENST00000460427 KRTAP5-7Q6L8G8 165 aa6.44□□□□□ -1.38
ACTR1B-203ENST00000460427 LCE3CQ5T5A8 94 aa6.4□□□□□ -1.38
ACTR1B-203ENST00000460427 SYNE1Q8NF91 8797 aaKnown RBP6.39□□□□□ -1.39
ACTR1B-203ENST00000460427 A6NED7 52 aa6.38□□□□□ -1.39
ACTR1B-203ENST00000460427 CDC42SE1Q9NRR8 79 aa6.33□□□□□ -1.4
ACTR1B-203ENST00000460427 PCP4P48539 62 aa6.24□□□□□ -1.41
ACTR1B-203ENST00000460427 ROMO1P60602 79 aa6.21□□□□□ -1.42
ACTR1B-203ENST00000460427 MT1AP04731 61 aa6.17□□□□□ -1.42
ACTR1B-203ENST00000460427 RPS28P62857 69 aaKnown RBP6.17□□□□□ -1.42
ACTR1B-203ENST00000460427 KRTAP6-1Q3LI64 71 aa6.14□□□□□ -1.43
ACTR1B-203ENST00000460427 KRTAP5-2Q701N4 177 aa6.09□□□□□ -1.43
ACTR1B-203ENST00000460427 KRTAP4-11Q9BYQ6 195 aa6.04□□□□□ -1.44
ACTR1B-203ENST00000460427 KRTAP9-6A8MVA2 160 aa6.03□□□□□ -1.44
ACTR1B-203ENST00000460427 KRTAP9-4Q9BYQ2 154 aa5.98□□□□□ -1.45
ACTR1B-203ENST00000460427 KRTAP6-2Q3LI66 62 aa5.89□□□□□ -1.47
ACTR1B-203ENST00000460427 KRTAP5-8O75690 187 aa5.83□□□□□ -1.48
ACTR1B-203ENST00000460427 OBSCNQ5VST9 7968 aa5.76□□□□□ -1.49
ACTR1B-203ENST00000460427 MT3P25713 68 aa5.65□□□□□ -1.5
ACTR1B-203ENST00000460427 KRTAP9-9Q9BYP9 154 aa5.56□□□□□ -1.52
ACTR1B-203ENST00000460427 MUC5BQ9HC84 5762 aaPredicted RBP5.56□□□□□ -1.52
ACTR1B-203ENST00000460427 MUC5ACP98088 5654 aa5.55□□□□□ -1.52
ACTR1B-203ENST00000460427 AHNAKQ09666 5890 aaKnown RBP5.53□□□□□ -1.52
ACTR1B-203ENST00000460427 KRTAP5-1Q6L8H4 278 aa5.48□□□□□ -1.53
ACTR1B-203ENST00000460427 BRK1Q8WUW1 75 aa5.36□□□□□ -1.55
ACTR1B-203ENST00000460427 LCE1EQ5T753 118 aa5.21□□□□□ -1.58
ACTR1B-203ENST00000460427 PMAIP1Q13794 54 aa5.09□□□□□ -1.59
ACTR1B-203ENST00000460427 KRTAP4-2Q9BYR5 136 aa4.93□□□□□ -1.62
ACTR1B-203ENST00000460427 LCE1BQ5T7P3 118 aa4.92□□□□□ -1.62
ACTR1B-203ENST00000460427 PRO0628Q9UI54 55 aa4.92□□□□□ -1.62
ACTR1B-203ENST00000460427 LCE1CQ5T751 118 aa4.84□□□□□ -1.63
ACTR1B-203ENST00000460427 PRAC1Q96KF2 57 aa4.83□□□□□ -1.64
ACTR1B-203ENST00000460427 KTN1-AS1Q86SY8 53 aa4.64□□□□□ -1.67
ACTR1B-203ENST00000460427 LCE3DQ9BYE3 92 aa4.6□□□□□ -1.67
ACTR1B-203ENST00000460427 KRTAP4-12Q9BQ66 201 aa4.51□□□□□ -1.69
ACTR1B-203ENST00000460427 KRTAP5-11Q6L8G4 156 aa4.39□□□□□ -1.71
ACTR1B-203ENST00000460427 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.39□□□□□ -1.71
ACTR1B-203ENST00000460427 SVIPQ8NHG7 77 aa4.38□□□□□ -1.71
ACTR1B-203ENST00000460427 LCE3EQ5T5B0 92 aa4.3□□□□□ -1.72
ACTR1B-203ENST00000460427 LCE1FQ5T754 118 aa4.3□□□□□ -1.72
ACTR1B-203ENST00000460427 LUZP6Q538Z0 58 aa4.14□□□□□ -1.75
ACTR1B-203ENST00000460427 KRTAP21-2Q3LI59 83 aa4.04□□□□□ -1.76
ACTR1B-203ENST00000460427 PHGR1C9JFL3 82 aa3.91□□□□□ -1.78
ACTR1B-203ENST00000460427 KRTAP4-4Q9BYR3 166 aa3.73□□□□□ -1.81
ACTR1B-203ENST00000460427 MUC19Q7Z5P9 8384 aa3.55□□□□□ -1.84
ACTR1B-203ENST00000460427 NDUFAF8A1L188 74 aa3.45□□□□□ -1.86
ACTR1B-203ENST00000460427 PRM1P04553 51 aa3.17□□□□□ -1.9
ACTR1B-203ENST00000460427 A0A0A0MQY5 61 aa3.03□□□□□ -1.92
ACTR1B-203ENST00000460427 KRTAP21-1Q3LI58 79 aa2.96□□□□□ -1.94
ACTR1B-203ENST00000460427 INE1O15225 51 aa2.88□□□□□ -1.95
ACTR1B-203ENST00000460427 H3BS24 57 aa2.79□□□□□ -1.96
ACTR1B-203ENST00000460427 MUC16Q8WXI7 14507 aa2.48□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 36.2 ms