RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 KRTAP4-7Q9BYR0 210 aa4.16□□□□□ -1.74
GPNMB-204ENST00000459927 TNP1P09430 55 aa4.14□□□□□ -1.75
GPNMB-204ENST00000459927 KRTAP20-2Q3LI61 65 aa4.12□□□□□ -1.75
GPNMB-204ENST00000459927 SMIM26A0A096LP01 95 aa4.11□□□□□ -1.75
GPNMB-204ENST00000459927 K7ERU9 68 aa4.11□□□□□ -1.75
GPNMB-204ENST00000459927 A8MU10 97 aa4.09□□□□□ -1.75
GPNMB-204ENST00000459927 SPRR5A0A1B0GTR4 108 aa4.08□□□□□ -1.76
GPNMB-204ENST00000459927 SVIPQ8NHG7 77 aa4.07□□□□□ -1.76
GPNMB-204ENST00000459927 KRTAP5-5Q701N2 237 aaPredicted RBP4.06□□□□□ -1.76
GPNMB-204ENST00000459927 KRTAP9-9Q9BYP9 154 aa4.06□□□□□ -1.76
GPNMB-204ENST00000459927 KRTAP9-4Q9BYQ2 154 aa4.06□□□□□ -1.76
GPNMB-204ENST00000459927 KRTAP12-3P60328 96 aa4.05□□□□□ -1.76
GPNMB-204ENST00000459927 KRTAP12-4P60329 112 aa4.03□□□□□ -1.76
GPNMB-204ENST00000459927 A0A1B0GU69 56 aa4.02□□□□□ -1.77
GPNMB-204ENST00000459927 PCP4P48539 62 aa4.02□□□□□ -1.77
GPNMB-204ENST00000459927 SYNE1Q8NF91 8797 aaKnown RBP3.98□□□□□ -1.77
GPNMB-204ENST00000459927 H7BZZ5 65 aa3.95□□□□□ -1.78
GPNMB-204ENST00000459927 COX7CP15954 63 aa3.95□□□□□ -1.78
GPNMB-204ENST00000459927 KRTAP19-4Q3LI73 84 aa3.84□□□□□ -1.79
GPNMB-204ENST00000459927 KRTAP4-11Q9BYQ6 195 aa3.84□□□□□ -1.79
GPNMB-204ENST00000459927 PRR15LQ9BU68 103 aa3.8□□□□□ -1.8
GPNMB-204ENST00000459927 H3BS24 57 aa3.79□□□□□ -1.8
GPNMB-204ENST00000459927 KRTAP25-1Q3LHN0 102 aa3.76□□□□□ -1.81
GPNMB-204ENST00000459927 KRTAP5-2Q701N4 177 aa3.76□□□□□ -1.81
GPNMB-204ENST00000459927 LINC01558Q9Y6Z2 57 aa3.75□□□□□ -1.81
GPNMB-204ENST00000459927 KRTAP5-8O75690 187 aa3.72□□□□□ -1.81
GPNMB-204ENST00000459927 LCE3CQ5T5A8 94 aa3.72□□□□□ -1.81
GPNMB-204ENST00000459927 KRTAP6-1Q3LI64 71 aa3.7□□□□□ -1.82
GPNMB-204ENST00000459927 KRTAP15-1Q3LI76 137 aa3.7□□□□□ -1.82
GPNMB-204ENST00000459927 UQCR11O14957 56 aa3.69□□□□□ -1.82
GPNMB-204ENST00000459927 MT1AP04731 61 aa3.69□□□□□ -1.82
GPNMB-204ENST00000459927 KRTAP4-2Q9BYR5 136 aa3.67□□□□□ -1.82
GPNMB-204ENST00000459927 AHNAKQ09666 5890 aaKnown RBP3.67□□□□□ -1.82
GPNMB-204ENST00000459927 KRTAP23-1A1A580 65 aa3.65□□□□□ -1.83
GPNMB-204ENST00000459927 MUC5BQ9HC84 5762 aaPredicted RBP3.63□□□□□ -1.83
GPNMB-204ENST00000459927 MUC5ACP98088 5654 aa3.63□□□□□ -1.83
GPNMB-204ENST00000459927 ANAPC13Q9BS18 74 aa3.62□□□□□ -1.83
GPNMB-204ENST00000459927 OBSCNQ5VST9 7968 aa3.59□□□□□ -1.83
GPNMB-204ENST00000459927 CCDC179H3BU77 68 aa3.59□□□□□ -1.83
GPNMB-204ENST00000459927 ATP5EP56381 51 aaPredicted RBP3.59□□□□□ -1.83
GPNMB-204ENST00000459927 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.83
GPNMB-204ENST00000459927 MIR22HGQ0VDD5 57 aa3.58□□□□□ -1.84
GPNMB-204ENST00000459927 K7ERS5 55 aa3.54□□□□□ -1.84
GPNMB-204ENST00000459927 KRTAP9-6A8MVA2 160 aa3.52□□□□□ -1.85
GPNMB-204ENST00000459927 KRTAP5-1Q6L8H4 278 aa3.44□□□□□ -1.86
GPNMB-204ENST00000459927 MT3P25713 68 aa3.41□□□□□ -1.86
GPNMB-204ENST00000459927 TMEM258P61165 79 aa3.39□□□□□ -1.87
GPNMB-204ENST00000459927 RPS28P62857 69 aaKnown RBP3.39□□□□□ -1.87
GPNMB-204ENST00000459927 Q1T7F1 81 aa3.38□□□□□ -1.87
GPNMB-204ENST00000459927 PSPHP1O15172 72 aa3.36□□□□□ -1.87
GPNMB-204ENST00000459927 CDC42SE1Q9NRR8 79 aa3.32□□□□□ -1.88
GPNMB-204ENST00000459927 V9GYY9 64 aa3.31□□□□□ -1.88
GPNMB-204ENST00000459927 PRO0628Q9UI54 55 aa3.29□□□□□ -1.88
GPNMB-204ENST00000459927 ROMO1P60602 79 aa3.27□□□□□ -1.89
GPNMB-204ENST00000459927 LCE1EQ5T753 118 aa3.21□□□□□ -1.9
GPNMB-204ENST00000459927 A6NED7 52 aa3.2□□□□□ -1.9
GPNMB-204ENST00000459927 BRK1Q8WUW1 75 aa3.13□□□□□ -1.91
GPNMB-204ENST00000459927 PMAIP1Q13794 54 aa3.12□□□□□ -1.91
GPNMB-204ENST00000459927 LCE1BQ5T7P3 118 aa3.02□□□□□ -1.93
GPNMB-204ENST00000459927 KTN1-AS1Q86SY8 53 aa2.99□□□□□ -1.93
GPNMB-204ENST00000459927 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
GPNMB-204ENST00000459927 LCE1FQ5T754 118 aa2.71□□□□□ -1.98
GPNMB-204ENST00000459927 PRAC1Q96KF2 57 aa2.71□□□□□ -1.98
GPNMB-204ENST00000459927 KRTAP5-11Q6L8G4 156 aa2.7□□□□□ -1.98
GPNMB-204ENST00000459927 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.66□□□□□ -1.98
GPNMB-204ENST00000459927 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
GPNMB-204ENST00000459927 A0A0A0MQY5 61 aa2.57□□□□□ -2
GPNMB-204ENST00000459927 PHGR1C9JFL3 82 aa2.54□□□□□ -2
GPNMB-204ENST00000459927 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
GPNMB-204ENST00000459927 LCE3EQ5T5B0 92 aa2.43□□□□□ -2.02
GPNMB-204ENST00000459927 NDUFAF8A1L188 74 aa2.41□□□□□ -2.02
GPNMB-204ENST00000459927 LUZP6Q538Z0 58 aa2.38□□□□□ -2.03
GPNMB-204ENST00000459927 KRTAP4-4Q9BYR3 166 aa2.29□□□□□ -2.04
GPNMB-204ENST00000459927 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
GPNMB-204ENST00000459927 INE1O15225 51 aa2.05□□□□□ -2.08
GPNMB-204ENST00000459927 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
GPNMB-204ENST00000459927 PRM1P04553 51 aa1.65□□□□□ -2.15
GPNMB-204ENST00000459927 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 71.3 ms