RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 COA5Q86WW8 74 aa3.54□□□□□ -1.84
HDLBP-227ENST00000458564 A0A1B0GU33 70 aa3.53□□□□□ -1.84
HDLBP-227ENST00000458564 KRTAP20-2Q3LI61 65 aa3.52□□□□□ -1.85
HDLBP-227ENST00000458564 ANAPC13Q9BS18 74 aa3.52□□□□□ -1.85
HDLBP-227ENST00000458564 CCDC179H3BU77 68 aa3.5□□□□□ -1.85
HDLBP-227ENST00000458564 SPRR5A0A1B0GTR4 108 aa3.49□□□□□ -1.85
HDLBP-227ENST00000458564 TNP1P09430 55 aa3.48□□□□□ -1.85
HDLBP-227ENST00000458564 KRTAP5-5Q701N2 237 aaPredicted RBP3.48□□□□□ -1.85
HDLBP-227ENST00000458564 KRTAP4-7Q9BYR0 210 aa3.46□□□□□ -1.86
HDLBP-227ENST00000458564 SMIM26A0A096LP01 95 aa3.44□□□□□ -1.86
HDLBP-227ENST00000458564 H7BZZ5 65 aa3.44□□□□□ -1.86
HDLBP-227ENST00000458564 KRTAP12-3P60328 96 aa3.42□□□□□ -1.86
HDLBP-227ENST00000458564 KRTAP12-4P60329 112 aa3.42□□□□□ -1.86
HDLBP-227ENST00000458564 A8MU10 97 aa3.39□□□□□ -1.87
HDLBP-227ENST00000458564 SYNE1Q8NF91 8797 aaKnown RBP3.38□□□□□ -1.87
HDLBP-227ENST00000458564 A0A1B0GU69 56 aa3.35□□□□□ -1.87
HDLBP-227ENST00000458564 TMEM258P61165 79 aa3.33□□□□□ -1.88
HDLBP-227ENST00000458564 LOC100996750A0A140TA64 210 aa3.3□□□□□ -1.88
HDLBP-227ENST00000458564 ATP5EP56381 51 aaPredicted RBP3.3□□□□□ -1.88
HDLBP-227ENST00000458564 KRTAP4-11Q9BYQ6 195 aa3.27□□□□□ -1.89
HDLBP-227ENST00000458564 KRTAP19-4Q3LI73 84 aa3.25□□□□□ -1.89
HDLBP-227ENST00000458564 KRTAP5-2Q701N4 177 aa3.23□□□□□ -1.89
HDLBP-227ENST00000458564 AHNAKQ09666 5890 aaKnown RBP3.21□□□□□ -1.9
HDLBP-227ENST00000458564 MUC5ACP98088 5654 aa3.19□□□□□ -1.9
HDLBP-227ENST00000458564 MUC5BQ9HC84 5762 aaPredicted RBP3.19□□□□□ -1.9
HDLBP-227ENST00000458564 KRTAP25-1Q3LHN0 102 aa3.18□□□□□ -1.9
HDLBP-227ENST00000458564 PRR15LQ9BU68 103 aa3.18□□□□□ -1.9
HDLBP-227ENST00000458564 KRTAP5-8O75690 187 aa3.17□□□□□ -1.9
HDLBP-227ENST00000458564 RPS28P62857 69 aaKnown RBP3.17□□□□□ -1.9
HDLBP-227ENST00000458564 MT1AP04731 61 aa3.14□□□□□ -1.91
HDLBP-227ENST00000458564 LINC01558Q9Y6Z2 57 aa3.14□□□□□ -1.91
HDLBP-227ENST00000458564 KRTAP6-1Q3LI64 71 aa3.12□□□□□ -1.91
HDLBP-227ENST00000458564 LCE3CQ5T5A8 94 aa3.12□□□□□ -1.91
HDLBP-227ENST00000458564 OBSCNQ5VST9 7968 aa3.11□□□□□ -1.91
HDLBP-227ENST00000458564 Q1T7F1 81 aa3.11□□□□□ -1.91
HDLBP-227ENST00000458564 KRTAP15-1Q3LI76 137 aa3.11□□□□□ -1.91
HDLBP-227ENST00000458564 V9GYY9 64 aa3.1□□□□□ -1.91
HDLBP-227ENST00000458564 UQCR11O14957 56 aa3.08□□□□□ -1.92
HDLBP-227ENST00000458564 KRTAP23-1A1A580 65 aa3.07□□□□□ -1.92
HDLBP-227ENST00000458564 PSPHP1O15172 72 aa3.05□□□□□ -1.92
HDLBP-227ENST00000458564 KRTAP9-4Q9BYQ2 154 aa3.05□□□□□ -1.92
HDLBP-227ENST00000458564 PRO0628Q9UI54 55 aa3.04□□□□□ -1.92
HDLBP-227ENST00000458564 KRTAP6-2Q3LI66 62 aa3.03□□□□□ -1.92
HDLBP-227ENST00000458564 KRTAP9-9Q9BYP9 154 aa3.03□□□□□ -1.92
HDLBP-227ENST00000458564 K7ERS5 55 aa2.98□□□□□ -1.93
HDLBP-227ENST00000458564 MIR22HGQ0VDD5 57 aa2.97□□□□□ -1.93
HDLBP-227ENST00000458564 KRTAP9-6A8MVA2 160 aa2.96□□□□□ -1.94
HDLBP-227ENST00000458564 H3BS24 57 aa2.94□□□□□ -1.94
HDLBP-227ENST00000458564 KRTAP5-1Q6L8H4 278 aa2.94□□□□□ -1.94
HDLBP-227ENST00000458564 A6NED7 52 aa2.92□□□□□ -1.94
HDLBP-227ENST00000458564 MT3P25713 68 aa2.88□□□□□ -1.95
HDLBP-227ENST00000458564 PMAIP1Q13794 54 aa2.88□□□□□ -1.95
HDLBP-227ENST00000458564 CDC42SE1Q9NRR8 79 aa2.88□□□□□ -1.95
HDLBP-227ENST00000458564 A0A0A0MQY5 61 aa2.82□□□□□ -1.96
HDLBP-227ENST00000458564 BRK1Q8WUW1 75 aa2.81□□□□□ -1.96
HDLBP-227ENST00000458564 KTN1-AS1Q86SY8 53 aa2.74□□□□□ -1.97
HDLBP-227ENST00000458564 LCE1EQ5T753 118 aa2.73□□□□□ -1.97
HDLBP-227ENST00000458564 ROMO1P60602 79 aa2.72□□□□□ -1.97
HDLBP-227ENST00000458564 KRTAP4-2Q9BYR5 136 aa2.6□□□□□ -1.99
HDLBP-227ENST00000458564 PRAC1Q96KF2 57 aa2.54□□□□□ -2
HDLBP-227ENST00000458564 LCE1CQ5T751 118 aa2.53□□□□□ -2
HDLBP-227ENST00000458564 LCE1BQ5T7P3 118 aa2.53□□□□□ -2
HDLBP-227ENST00000458564 KRTAP4-12Q9BQ66 201 aa2.39□□□□□ -2.03
HDLBP-227ENST00000458564 KRTAP5-11Q6L8G4 156 aa2.34□□□□□ -2.03
HDLBP-227ENST00000458564 LUZP6Q538Z0 58 aa2.32□□□□□ -2.04
HDLBP-227ENST00000458564 LCE1FQ5T754 118 aa2.32□□□□□ -2.04
HDLBP-227ENST00000458564 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
HDLBP-227ENST00000458564 NDUFAF8A1L188 74 aa2.21□□□□□ -2.06
HDLBP-227ENST00000458564 LCE3DQ9BYE3 92 aa2.19□□□□□ -2.06
HDLBP-227ENST00000458564 PHGR1C9JFL3 82 aa2.17□□□□□ -2.06
HDLBP-227ENST00000458564 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
HDLBP-227ENST00000458564 LCE3EQ5T5B0 92 aa2.02□□□□□ -2.09
HDLBP-227ENST00000458564 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
HDLBP-227ENST00000458564 INE1O15225 51 aa1.89□□□□□ -2.11
HDLBP-227ENST00000458564 KRTAP4-4Q9BYR3 166 aa1.89□□□□□ -2.11
HDLBP-227ENST00000458564 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
HDLBP-227ENST00000458564 PRM1P04553 51 aa1.41□□□□□ -2.18
HDLBP-227ENST00000458564 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 122.6 ms