RNA–Protein interactions for RNA: ENST00000457861.1

SUN1-222, Transcript of Sad1 and UNC84 domain containing 1, human

TSL 2

Gene SUN1, Length 2,975 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUN1-222	ENST00000457861	LOC100996750	A0A140TA64	210 aa		5.4	□□□□□ -1.54
SUN1-222	ENST00000457861	KRTAP4-3	Q9BYR4	195 aa		5.37	□□□□□ -1.55
SUN1-222	ENST00000457861	MT1E	P04732	61 aa		5.36	□□□□□ -1.55
SUN1-222	ENST00000457861	SSPO	A2VEC9	5147 aa		5.36	□□□□□ -1.55
SUN1-222	ENST00000457861	LCE2A	Q5TA79	106 aa	Predicted RBP	5.3	□□□□□ -1.56
SUN1-222	ENST00000457861	MT1G	P13640	62 aa		5.28	□□□□□ -1.56
SUN1-222	ENST00000457861	SYNE1	Q8NF91	8797 aa	Known RBP	5.25	□□□□□ -1.57
SUN1-222	ENST00000457861	KRTAP12-4	P60329	112 aa		5.14	□□□□□ -1.59
SUN1-222	ENST00000457861	OBSCN	Q5VST9	7968 aa		5.1	□□□□□ -1.59
SUN1-222	ENST00000457861	LCE2D	Q5TA82	110 aa	Predicted RBP	5.05	□□□□□ -1.6
SUN1-222	ENST00000457861	LCE3B	Q5TA77	95 aa		5.02	□□□□□ -1.61
SUN1-222	ENST00000457861	KRTAP4-9	Q9BYQ8	210 aa		5.01	□□□□□ -1.61
SUN1-222	ENST00000457861	MT1M	Q8N339	61 aa		5.01	□□□□□ -1.61
SUN1-222	ENST00000457861	KRTAP19-4	Q3LI73	84 aa		4.99	□□□□□ -1.61
SUN1-222	ENST00000457861	SYNE2	Q8WXH0	6885 aa	Known RBP	4.96	□□□□□ -1.62
SUN1-222	ENST00000457861	KRTAP19-3	Q7Z4W3	81 aa		4.95	□□□□□ -1.62
SUN1-222	ENST00000457861	KRTAP19-6	Q3LI70	58 aa		4.9	□□□□□ -1.63
SUN1-222	ENST00000457861	SPRR2F	Q96RM1	72 aa		4.86	□□□□□ -1.63
SUN1-222	ENST00000457861	MACF1	Q9UPN3	7388 aa	Known RBP	4.81	□□□□□ -1.64
SUN1-222	ENST00000457861	MDN1	Q9NU22	5596 aa		4.77	□□□□□ -1.65
SUN1-222	ENST00000457861	LCE5A	Q5TCM9	118 aa		4.69	□□□□□ -1.66
SUN1-222	ENST00000457861	KRTAP6-1	Q3LI64	71 aa		4.69	□□□□□ -1.66
SUN1-222	ENST00000457861	KRTAP9-7	A8MTY7	169 aa		4.67	□□□□□ -1.66
SUN1-222	ENST00000457861	KRTAP9-2	Q9BYQ4	174 aa		4.67	□□□□□ -1.66
SUN1-222	ENST00000457861	LCE3D	Q9BYE3	92 aa		4.63	□□□□□ -1.67
SUN1-222	ENST00000457861	PRM1	P04553	51 aa		4.61	□□□□□ -1.67
SUN1-222	ENST00000457861	LCE3E	Q5T5B0	92 aa		4.56	□□□□□ -1.68
SUN1-222	ENST00000457861	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.48	□□□□□ -1.69
SUN1-222	ENST00000457861	MT1A	P04731	61 aa		4.48	□□□□□ -1.69
SUN1-222	ENST00000457861	KRTAP6-2	Q3LI66	62 aa		4.35	□□□□□ -1.71
SUN1-222	ENST00000457861	LCE1A	Q5T7P2	110 aa		4.3	□□□□□ -1.72
SUN1-222	ENST00000457861	SPRR2E	P22531	72 aa		4.28	□□□□□ -1.72
SUN1-222	ENST00000457861	SPRR2B	P35325	72 aa		4.28	□□□□□ -1.72
SUN1-222	ENST00000457861	SPRR2A	P35326	72 aa		4.28	□□□□□ -1.72
SUN1-222	ENST00000457861	KRTAP9-4	Q9BYQ2	154 aa		4.17	□□□□□ -1.74
SUN1-222	ENST00000457861	KRTAP6-3	Q3LI67	103 aa		4.1	□□□□□ -1.75
SUN1-222	ENST00000457861	KRTAP9-6	A0A140TA67	174 aa		4.1	□□□□□ -1.75
SUN1-222	ENST00000457861	SPRR2D	P22532	72 aa		4.06	□□□□□ -1.76
SUN1-222	ENST00000457861	MT3	P25713	68 aa		4.03	□□□□□ -1.76
SUN1-222	ENST00000457861	KRTAP5-9	P26371	169 aa		4.02	□□□□□ -1.77
SUN1-222	ENST00000457861	KRTAP2-2	Q9BYT5	123 aa		3.97	□□□□□ -1.77
SUN1-222	ENST00000457861	LCE1E	Q5T753	118 aa		3.84	□□□□□ -1.79
SUN1-222	ENST00000457861	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	3.77	□□□□□ -1.81
SUN1-222	ENST00000457861	MT4	P47944	62 aa		3.77	□□□□□ -1.81
SUN1-222	ENST00000457861	KRTAP4-6	Q9BYQ5	205 aa		3.73	□□□□□ -1.81
SUN1-222	ENST00000457861	LCE1D	Q5T752	114 aa		3.64	□□□□□ -1.83
SUN1-222	ENST00000457861	MUC5AC	P98088	5654 aa		3.61	□□□□□ -1.83
SUN1-222	ENST00000457861	NEB	P20929	6669 aa		3.56	□□□□□ -1.84
SUN1-222	ENST00000457861	KRTAP4-11	Q9BYQ6	195 aa		3.53	□□□□□ -1.84
SUN1-222	ENST00000457861	HMCN1	Q96RW7	5635 aa		3.53	□□□□□ -1.85
SUN1-222	ENST00000457861	KRTAP5-4	Q6L8H1	288 aa		3.52	□□□□□ -1.85
SUN1-222	ENST00000457861	LCE1B	Q5T7P3	118 aa		3.51	□□□□□ -1.85
SUN1-222	ENST00000457861	KRTAP20-2	Q3LI61	65 aa		3.48	□□□□□ -1.85
SUN1-222	ENST00000457861	MUC19	Q7Z5P9	8384 aa		3.45	□□□□□ -1.86
SUN1-222	ENST00000457861	LCE1F	Q5T754	118 aa		3.41	□□□□□ -1.86
SUN1-222	ENST00000457861	KRTAP5-2	Q701N4	177 aa		3.33	□□□□□ -1.88
SUN1-222	ENST00000457861	KRTAP5-10	Q6L8G5	202 aa		3.27	□□□□□ -1.89
SUN1-222	ENST00000457861	LCE4A	Q5TA78	99 aa		3.23	□□□□□ -1.89
SUN1-222	ENST00000457861	KRTAP20-1	Q3LI63	56 aa		3.22	□□□□□ -1.89
SUN1-222	ENST00000457861	KRTAP5-3	Q6L8H2	238 aa		3.18	□□□□□ -1.9
SUN1-222	ENST00000457861	KRTAP9-9	Q9BYP9	154 aa		3.16	□□□□□ -1.9
SUN1-222	ENST00000457861	KRTAP5-1	Q6L8H4	278 aa		3.06	□□□□□ -1.92
SUN1-222	ENST00000457861	KRTAP4-2	Q9BYR5	136 aa		3.03	□□□□□ -1.92
SUN1-222	ENST00000457861	KRTAP4-4	Q9BYR3	166 aa		3.01	□□□□□ -1.93
SUN1-222	ENST00000457861	LCE1C	Q5T751	118 aa		2.93	□□□□□ -1.94
SUN1-222	ENST00000457861	KRTAP21-2	Q3LI59	83 aa		2.91	□□□□□ -1.94
SUN1-222	ENST00000457861	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.82	□□□□□ -1.96
SUN1-222	ENST00000457861	AHNAK2	Q8IVF2	5795 aa		2.78	□□□□□ -1.96
SUN1-222	ENST00000457861	GPR98	Q8WXG9	6306 aa		2.74	□□□□□ -1.97
SUN1-222	ENST00000457861	KRTAP4-12	Q9BQ66	201 aa		2.72	□□□□□ -1.97
SUN1-222	ENST00000457861	KRTAP21-1	Q3LI58	79 aa		2.71	□□□□□ -1.98
SUN1-222	ENST00000457861	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.67	□□□□□ -1.98
SUN1-222	ENST00000457861	KRTAP5-8	O75690	187 aa		2.62	□□□□□ -1.99
SUN1-222	ENST00000457861	KRTAP5-7	Q6L8G8	165 aa		2.51	□□□□□ -2.01
SUN1-222	ENST00000457861	KRTAP5-11	Q6L8G4	156 aa		2.47	□□□□□ -2.01
SUN1-222	ENST00000457861	AHNAK	Q09666	5890 aa	Known RBP	2.2	□□□□□ -2.06
SUN1-222	ENST00000457861	PHGR1	C9JFL3	82 aa		2.18	□□□□□ -2.06
SUN1-222	ENST00000457861	MUC16	Q8WXI7	14507 aa		1.58	□□□□□ -2.16

Retrieved 78 of 20,778 RNA–protein pairs in 18.3 ms