RNA–Protein interactions for RNA: ENST00000455548.2

SMPD4-214, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-214ENST00000455548 PP632Q6XCG6 107 aa5.83□□□□□ -1.48
SMPD4-214ENST00000455548 MT1LQ93083 61 aa5.8□□□□□ -1.48
SMPD4-214ENST00000455548 DSTQ03001 7570 aaKnown RBP5.76□□□□□ -1.49
SMPD4-214ENST00000455548 KRTAP25-1Q3LHN0 102 aa5.75□□□□□ -1.49
SMPD4-214ENST00000455548 MT1MQ8N339 61 aa5.74□□□□□ -1.49
SMPD4-214ENST00000455548 A6NED7 52 aa5.71□□□□□ -1.5
SMPD4-214ENST00000455548 KRTAP12-3P60328 96 aa5.7□□□□□ -1.5
SMPD4-214ENST00000455548 PCP4P48539 62 aa5.69□□□□□ -1.5
SMPD4-214ENST00000455548 RPS28P62857 69 aaKnown RBP5.69□□□□□ -1.5
SMPD4-214ENST00000455548 KRTAP4-3Q9BYR4 195 aa5.57□□□□□ -1.52
SMPD4-214ENST00000455548 KRTAP23-1A1A580 65 aa5.54□□□□□ -1.52
SMPD4-214ENST00000455548 KRTAP4-9Q9BYQ8 210 aa5.53□□□□□ -1.52
SMPD4-214ENST00000455548 CDC42SE1Q9NRR8 79 aa5.52□□□□□ -1.53
SMPD4-214ENST00000455548 LCE4AQ5TA78 99 aa5.5□□□□□ -1.53
SMPD4-214ENST00000455548 KRTAP4-7Q9BYR0 210 aa5.48□□□□□ -1.53
SMPD4-214ENST00000455548 KRTAP19-4Q3LI73 84 aa5.44□□□□□ -1.54
SMPD4-214ENST00000455548 LCE1DQ5T752 114 aa5.44□□□□□ -1.54
SMPD4-214ENST00000455548 ROMO1P60602 79 aa5.43□□□□□ -1.54
SMPD4-214ENST00000455548 KRTAP5-4Q6L8H1 288 aa5.41□□□□□ -1.54
SMPD4-214ENST00000455548 HMCN1Q96RW7 5635 aa5.39□□□□□ -1.55
SMPD4-214ENST00000455548 MT4P47944 62 aa5.39□□□□□ -1.55
SMPD4-214ENST00000455548 KRTAP15-1Q3LI76 137 aa5.37□□□□□ -1.55
SMPD4-214ENST00000455548 LCE3CQ5T5A8 94 aa5.26□□□□□ -1.57
SMPD4-214ENST00000455548 KRTAP5-5Q701N2 237 aaPredicted RBP5.24□□□□□ -1.57
SMPD4-214ENST00000455548 KRTAP4-6Q9BYQ5 205 aa5.24□□□□□ -1.57
SMPD4-214ENST00000455548 GPR98Q8WXG9 6306 aa5.22□□□□□ -1.57
SMPD4-214ENST00000455548 LOC100996750A0A140TA64 210 aa5.18□□□□□ -1.58
SMPD4-214ENST00000455548 AHNAK2Q8IVF2 5795 aa5.15□□□□□ -1.58
SMPD4-214ENST00000455548 KRTAP12-4P60329 112 aa5.13□□□□□ -1.59
SMPD4-214ENST00000455548 SPRR5A0A1B0GTR4 108 aa5.11□□□□□ -1.59
SMPD4-214ENST00000455548 SVIPQ8NHG7 77 aa5.11□□□□□ -1.59
SMPD4-214ENST00000455548 KRTAP20-2Q3LI61 65 aa5.09□□□□□ -1.59
SMPD4-214ENST00000455548 BRK1Q8WUW1 75 aa5□□□□□ -1.61
SMPD4-214ENST00000455548 KRTAP5-10Q6L8G5 202 aa4.99□□□□□ -1.61
SMPD4-214ENST00000455548 SYNE1Q8NF91 8797 aaKnown RBP4.97□□□□□ -1.61
SMPD4-214ENST00000455548 MT1AP04731 61 aa4.94□□□□□ -1.62
SMPD4-214ENST00000455548 KRTAP5-3Q6L8H2 238 aa4.93□□□□□ -1.62
SMPD4-214ENST00000455548 KRTAP9-6A8MVA2 160 aa4.92□□□□□ -1.62
SMPD4-214ENST00000455548 KRTAP6-1Q3LI64 71 aa4.89□□□□□ -1.63
SMPD4-214ENST00000455548 KRTAP5-7Q6L8G8 165 aa4.8□□□□□ -1.64
SMPD4-214ENST00000455548 KRTAP5-2Q701N4 177 aa4.76□□□□□ -1.65
SMPD4-214ENST00000455548 KRTAP9-4Q9BYQ2 154 aa4.76□□□□□ -1.65
SMPD4-214ENST00000455548 PMAIP1Q13794 54 aa4.72□□□□□ -1.65
SMPD4-214ENST00000455548 KRTAP6-2Q3LI66 62 aa4.65□□□□□ -1.67
SMPD4-214ENST00000455548 KRTAP4-11Q9BYQ6 195 aa4.62□□□□□ -1.67
SMPD4-214ENST00000455548 MT3P25713 68 aa4.53□□□□□ -1.68
SMPD4-214ENST00000455548 PRAC1Q96KF2 57 aa4.49□□□□□ -1.69
SMPD4-214ENST00000455548 KRTAP5-8O75690 187 aa4.45□□□□□ -1.7
SMPD4-214ENST00000455548 PRO0628Q9UI54 55 aa4.45□□□□□ -1.7
SMPD4-214ENST00000455548 OBSCNQ5VST9 7968 aa4.39□□□□□ -1.71
SMPD4-214ENST00000455548 MUC5BQ9HC84 5762 aaPredicted RBP4.24□□□□□ -1.73
SMPD4-214ENST00000455548 KRTAP5-1Q6L8H4 278 aa4.23□□□□□ -1.73
SMPD4-214ENST00000455548 KTN1-AS1Q86SY8 53 aa4.23□□□□□ -1.73
SMPD4-214ENST00000455548 KRTAP9-9Q9BYP9 154 aa4.23□□□□□ -1.73
SMPD4-214ENST00000455548 AHNAKQ09666 5890 aaKnown RBP4.21□□□□□ -1.74
SMPD4-214ENST00000455548 MUC5ACP98088 5654 aa4.2□□□□□ -1.74
SMPD4-214ENST00000455548 LCE1EQ5T753 118 aa4.14□□□□□ -1.75
SMPD4-214ENST00000455548 H3BS24 57 aa3.95□□□□□ -1.78
SMPD4-214ENST00000455548 LCE1BQ5T7P3 118 aa3.86□□□□□ -1.79
SMPD4-214ENST00000455548 KRTAP4-2Q9BYR5 136 aa3.86□□□□□ -1.79
SMPD4-214ENST00000455548 LUZP6Q538Z0 58 aa3.84□□□□□ -1.79
SMPD4-214ENST00000455548 LCE1CQ5T751 118 aa3.83□□□□□ -1.8
SMPD4-214ENST00000455548 LCE3DQ9BYE3 92 aa3.82□□□□□ -1.8
SMPD4-214ENST00000455548 A0A0A0MQY5 61 aa3.74□□□□□ -1.81
SMPD4-214ENST00000455548 LCE3EQ5T5B0 92 aa3.62□□□□□ -1.83
SMPD4-214ENST00000455548 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.5□□□□□ -1.85
SMPD4-214ENST00000455548 KRTAP5-11Q6L8G4 156 aa3.46□□□□□ -1.86
SMPD4-214ENST00000455548 KRTAP4-12Q9BQ66 201 aa3.45□□□□□ -1.86
SMPD4-214ENST00000455548 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
SMPD4-214ENST00000455548 KRTAP21-2Q3LI59 83 aa3.22□□□□□ -1.89
SMPD4-214ENST00000455548 NDUFAF8A1L188 74 aa3.12□□□□□ -1.91
SMPD4-214ENST00000455548 PHGR1C9JFL3 82 aa2.97□□□□□ -1.93
SMPD4-214ENST00000455548 KRTAP4-4Q9BYR3 166 aa2.91□□□□□ -1.94
SMPD4-214ENST00000455548 PRM1P04553 51 aa2.76□□□□□ -1.97
SMPD4-214ENST00000455548 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.98
SMPD4-214ENST00000455548 INE1O15225 51 aa2.55□□□□□ -2
SMPD4-214ENST00000455548 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
SMPD4-214ENST00000455548 MUC16Q8WXI7 14507 aa1.95□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 131.1 ms