RNA–Protein interactions for RNA: ENST00000454664.2

CNKSR3-203, Transcript of CNKSR family member 3, humanhuman

TSL 5

Gene CNKSR3, Length 776 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-203ENST00000454664 MGAM2Q2M2H8 2515 aa1.35□□□□□ -2.19
CNKSR3-203ENST00000454664 LPAP08519 4548 aa1.34□□□□□ -2.19
CNKSR3-203ENST00000454664 FLNBO75369 2602 aaKnown RBP1.33□□□□□ -2.2
CNKSR3-203ENST00000454664 KRTAP19-5Q3LI72 72 aa1.33□□□□□ -2.2
CNKSR3-203ENST00000454664 TENM1Q9UKZ4 2725 aa1.33□□□□□ -2.2
CNKSR3-203ENST00000454664 PKHD1P08F94 4074 aa1.33□□□□□ -2.2
CNKSR3-203ENST00000454664 LRP1BQ9NZR2 4599 aa1.29□□□□□ -2.2
CNKSR3-203ENST00000454664 PRM1P04553 51 aa1.28□□□□□ -2.2
CNKSR3-203ENST00000454664 MAST4O15021 2626 aa1.27□□□□□ -2.21
CNKSR3-203ENST00000454664 MUC17Q685J3 4493 aa1.27□□□□□ -2.21
CNKSR3-203ENST00000454664 HERC1Q15751 4861 aa1.27□□□□□ -2.21
CNKSR3-203ENST00000454664 SPRR2GQ9BYE4 73 aa1.26□□□□□ -2.21
CNKSR3-203ENST00000454664 FAT1Q14517 4588 aa1.26□□□□□ -2.21
CNKSR3-203ENST00000454664 FCGBPQ9Y6R7 5405 aaPredicted RBP1.24□□□□□ -2.21
CNKSR3-203ENST00000454664 MT1AP04731 61 aa1.21□□□□□ -2.22
CNKSR3-203ENST00000454664 KRTAP19-2Q3LHN2 52 aa1.2□□□□□ -2.22
CNKSR3-203ENST00000454664 MT1XP80297 61 aa1.15□□□□□ -2.23
CNKSR3-203ENST00000454664 KRTAP19-8Q3LI54 63 aa1.14□□□□□ -2.23
CNKSR3-203ENST00000454664 LRP2P98164 4655 aa1.12□□□□□ -2.23
CNKSR3-203ENST00000454664 MT1EP04732 61 aa1.12□□□□□ -2.23
CNKSR3-203ENST00000454664 KRTAP6-2Q3LI66 62 aa1.1□□□□□ -2.23
CNKSR3-203ENST00000454664 MT1LQ93083 61 aa1.08□□□□□ -2.24
CNKSR3-203ENST00000454664 SPRR2BP35325 72 aa1.07□□□□□ -2.24
CNKSR3-203ENST00000454664 SPRR2AP35326 72 aa1.07□□□□□ -2.24
CNKSR3-203ENST00000454664 SPRR2FQ96RM1 72 aa1.07□□□□□ -2.24
CNKSR3-203ENST00000454664 MUC2Q02817 5179 aa1.07□□□□□ -2.24
CNKSR3-203ENST00000454664 SPRR2DP22532 72 aa1.06□□□□□ -2.24
CNKSR3-203ENST00000454664 HMCN2Q8NDA2 5059 aa1.05□□□□□ -2.24
CNKSR3-203ENST00000454664 MT1BP07438 61 aa1.04□□□□□ -2.24
CNKSR3-203ENST00000454664 DNHD1Q96M86 4753 aa1.03□□□□□ -2.24
CNKSR3-203ENST00000454664 KRTAP19-7Q3SYF9 63 aa1.02□□□□□ -2.25
CNKSR3-203ENST00000454664 KRTAP19-3Q7Z4W3 81 aa1.02□□□□□ -2.25
CNKSR3-203ENST00000454664 SYNE1Q8NF91 8797 aaKnown RBP1.02□□□□□ -2.25
CNKSR3-203ENST00000454664 MT1HL1P0DM35 61 aa1.01□□□□□ -2.25
CNKSR3-203ENST00000454664 SPRR2EP22531 72 aa1□□□□□ -2.25
CNKSR3-203ENST00000454664 HYDINQ4G0P3 5121 aa0.98□□□□□ -2.25
CNKSR3-203ENST00000454664 MT1HP80294 61 aa0.97□□□□□ -2.25
CNKSR3-203ENST00000454664 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
CNKSR3-203ENST00000454664 MT1FP04733 61 aa0.92□□□□□ -2.26
CNKSR3-203ENST00000454664 KMT2CQ8NEZ4 4911 aaKnown RBP0.91□□□□□ -2.26
CNKSR3-203ENST00000454664 MT2AP02795 61 aa0.91□□□□□ -2.26
CNKSR3-203ENST00000454664 MT1GP13640 62 aa0.91□□□□□ -2.26
CNKSR3-203ENST00000454664 UBR4Q5T4S7 5183 aa0.9□□□□□ -2.27
CNKSR3-203ENST00000454664 RYR3Q15413 4870 aa0.89□□□□□ -2.27
CNKSR3-203ENST00000454664 HERC2O95714 4834 aa0.87□□□□□ -2.27
CNKSR3-203ENST00000454664 USH2AO75445 5202 aa0.87□□□□□ -2.27
CNKSR3-203ENST00000454664 RYR1P21817 5038 aa0.87□□□□□ -2.27
CNKSR3-203ENST00000454664 MT1MQ8N339 61 aa0.86□□□□□ -2.27
CNKSR3-203ENST00000454664 PCLOQ9Y6V0 5065 aa0.85□□□□□ -2.27
CNKSR3-203ENST00000454664 BIRC6Q9NR09 4857 aa0.85□□□□□ -2.27
CNKSR3-203ENST00000454664 KRTAP6-1Q3LI64 71 aa0.84□□□□□ -2.27
CNKSR3-203ENST00000454664 AHNAK2Q8IVF2 5795 aa0.82□□□□□ -2.28
CNKSR3-203ENST00000454664 RYR2Q92736 4967 aa0.81□□□□□ -2.28
CNKSR3-203ENST00000454664 RNF213Q63HN8 5207 aa0.8□□□□□ -2.28
CNKSR3-203ENST00000454664 KRTAP5-10Q6L8G5 202 aa0.79□□□□□ -2.28
CNKSR3-203ENST00000454664 MDN1Q9NU22 5596 aa0.78□□□□□ -2.28
CNKSR3-203ENST00000454664 SSPOA2VEC9 5147 aa0.77□□□□□ -2.29
CNKSR3-203ENST00000454664 FAT4Q6V0I7 4981 aa0.77□□□□□ -2.29
CNKSR3-203ENST00000454664 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
CNKSR3-203ENST00000454664 EPPK1P58107 5090 aaKnown RBP0.71□□□□□ -2.3
CNKSR3-203ENST00000454664 ABCA13Q86UQ4 5058 aa0.69□□□□□ -2.3
CNKSR3-203ENST00000454664 MUC5ACP98088 5654 aa0.68□□□□□ -2.3
CNKSR3-203ENST00000454664 KIAA1109Q2LD37 5005 aa0.67□□□□□ -2.3
CNKSR3-203ENST00000454664 KMT2DO14686 5537 aa0.65□□□□□ -2.31
CNKSR3-203ENST00000454664 KRTAP19-6Q3LI70 58 aa0.5□□□□□ -2.33
CNKSR3-203ENST00000454664 MUC12Q9UKN1 5478 aa0.49□□□□□ -2.33
CNKSR3-203ENST00000454664 MUC5BQ9HC84 5762 aaPredicted RBP0.48□□□□□ -2.33
CNKSR3-203ENST00000454664 PHGR1C9JFL3 82 aa0.44□□□□□ -2.34
CNKSR3-203ENST00000454664 AHNAKQ09666 5890 aaKnown RBP0.38□□□□□ -2.35
CNKSR3-203ENST00000454664 DSTQ03001 7570 aaKnown RBP0.36□□□□□ -2.35
CNKSR3-203ENST00000454664 KRTAP20-2Q3LI61 65 aa0.33□□□□□ -2.36
CNKSR3-203ENST00000454664 MT4P47944 62 aa0.28□□□□□ -2.36
CNKSR3-203ENST00000454664 SYNE2Q8WXH0 6885 aaKnown RBP0.21□□□□□ -2.38
CNKSR3-203ENST00000454664 KRTAP20-1Q3LI63 56 aa0.2□□□□□ -2.38
CNKSR3-203ENST00000454664 FSIP2Q5CZC0 6907 aa0.18□□□□□ -2.38
CNKSR3-203ENST00000454664 NEBP20929 6669 aa0.11□□□□□ -2.39
CNKSR3-203ENST00000454664 MACF1Q9UPN3 7388 aaKnown RBP-0.03□□□□□ -2.41
CNKSR3-203ENST00000454664 GPR98Q8WXG9 6306 aa-0.04□□□□□ -2.42
Retrieved 78 of 20,778 RNA–protein pairs in 70.7 ms