RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 SVIPQ8NHG7 77 aa5.16□□□□□ -1.58
HDAC4-205ENST00000454542 RPS28P62857 69 aaKnown RBP5.14□□□□□ -1.59
HDAC4-205ENST00000454542 MT1GP13640 62 aa5.08□□□□□ -1.6
HDAC4-205ENST00000454542 MT1LQ93083 61 aa5.08□□□□□ -1.6
HDAC4-205ENST00000454542 K7ERS5 55 aa5.07□□□□□ -1.6
HDAC4-205ENST00000454542 A6NED7 52 aa5.04□□□□□ -1.6
HDAC4-205ENST00000454542 KRTAP25-1Q3LHN0 102 aa5.04□□□□□ -1.6
HDAC4-205ENST00000454542 MT1MQ8N339 61 aa5.02□□□□□ -1.61
HDAC4-205ENST00000454542 PP632Q6XCG6 107 aa5.01□□□□□ -1.61
HDAC4-205ENST00000454542 KRTAP12-3P60328 96 aa4.97□□□□□ -1.61
HDAC4-205ENST00000454542 DSTQ03001 7570 aaKnown RBP4.92□□□□□ -1.62
HDAC4-205ENST00000454542 KRTAP23-1A1A580 65 aa4.9□□□□□ -1.63
HDAC4-205ENST00000454542 CDC42SE1Q9NRR8 79 aa4.89□□□□□ -1.63
HDAC4-205ENST00000454542 GPR98Q8WXG9 6306 aa4.89□□□□□ -1.63
HDAC4-205ENST00000454542 KRTAP4-3Q9BYR4 195 aa4.85□□□□□ -1.63
HDAC4-205ENST00000454542 ROMO1P60602 79 aa4.8□□□□□ -1.64
HDAC4-205ENST00000454542 KRTAP4-7Q9BYR0 210 aa4.79□□□□□ -1.64
HDAC4-205ENST00000454542 KRTAP19-4Q3LI73 84 aa4.74□□□□□ -1.65
HDAC4-205ENST00000454542 LCE4AQ5TA78 99 aa4.74□□□□□ -1.65
HDAC4-205ENST00000454542 KRTAP5-4Q6L8H1 288 aa4.73□□□□□ -1.65
HDAC4-205ENST00000454542 KRTAP4-9Q9BYQ8 210 aa4.72□□□□□ -1.65
HDAC4-205ENST00000454542 KRTAP15-1Q3LI76 137 aa4.7□□□□□ -1.66
HDAC4-205ENST00000454542 LCE1DQ5T752 114 aa4.68□□□□□ -1.66
HDAC4-205ENST00000454542 LOC100996750A0A140TA64 210 aa4.65□□□□□ -1.67
HDAC4-205ENST00000454542 KRTAP4-6Q9BYQ5 205 aa4.65□□□□□ -1.67
HDAC4-205ENST00000454542 KRTAP5-5Q701N2 237 aaPredicted RBP4.63□□□□□ -1.67
HDAC4-205ENST00000454542 HMCN1Q96RW7 5635 aa4.61□□□□□ -1.67
HDAC4-205ENST00000454542 MT4P47944 62 aa4.6□□□□□ -1.67
HDAC4-205ENST00000454542 LCE3CQ5T5A8 94 aa4.59□□□□□ -1.67
HDAC4-205ENST00000454542 BRK1Q8WUW1 75 aa4.48□□□□□ -1.69
HDAC4-205ENST00000454542 KRTAP4-12Q9BQ66 201 aa4.43□□□□□ -1.7
HDAC4-205ENST00000454542 SPRR5A0A1B0GTR4 108 aa4.42□□□□□ -1.7
HDAC4-205ENST00000454542 KRTAP20-2Q3LI61 65 aa4.42□□□□□ -1.7
HDAC4-205ENST00000454542 AHNAK2Q8IVF2 5795 aa4.4□□□□□ -1.71
HDAC4-205ENST00000454542 SYNE1Q8NF91 8797 aaKnown RBP4.38□□□□□ -1.71
HDAC4-205ENST00000454542 KRTAP9-6A8MVA2 160 aa4.38□□□□□ -1.71
HDAC4-205ENST00000454542 A0A0A0MQY5 61 aa4.37□□□□□ -1.71
HDAC4-205ENST00000454542 KRTAP12-4P60329 112 aa4.37□□□□□ -1.71
HDAC4-205ENST00000454542 MT1AP04731 61 aa4.33□□□□□ -1.72
HDAC4-205ENST00000454542 KRTAP5-3Q6L8H2 238 aa4.31□□□□□ -1.72
HDAC4-205ENST00000454542 KRTAP5-10Q6L8G5 202 aa4.3□□□□□ -1.72
HDAC4-205ENST00000454542 KRTAP6-1Q3LI64 71 aa4.27□□□□□ -1.73
HDAC4-205ENST00000454542 KRTAP5-7Q6L8G8 165 aa4.22□□□□□ -1.73
HDAC4-205ENST00000454542 PMAIP1Q13794 54 aa4.2□□□□□ -1.74
HDAC4-205ENST00000454542 KRTAP5-2Q701N4 177 aa4.19□□□□□ -1.74
HDAC4-205ENST00000454542 KRTAP9-9Q9BYP9 154 aa4.17□□□□□ -1.74
HDAC4-205ENST00000454542 KRTAP9-4Q9BYQ2 154 aa4.17□□□□□ -1.74
HDAC4-205ENST00000454542 PRAC1Q96KF2 57 aa4.06□□□□□ -1.76
HDAC4-205ENST00000454542 PRO0628Q9UI54 55 aa4.06□□□□□ -1.76
HDAC4-205ENST00000454542 KRTAP6-2Q3LI66 62 aa4.03□□□□□ -1.76
HDAC4-205ENST00000454542 KRTAP4-11Q9BYQ6 195 aa3.97□□□□□ -1.77
HDAC4-205ENST00000454542 MT3P25713 68 aa3.92□□□□□ -1.78
HDAC4-205ENST00000454542 KRTAP5-8O75690 187 aa3.87□□□□□ -1.79
HDAC4-205ENST00000454542 KTN1-AS1Q86SY8 53 aa3.87□□□□□ -1.79
HDAC4-205ENST00000454542 AHNAKQ09666 5890 aaKnown RBP3.71□□□□□ -1.82
HDAC4-205ENST00000454542 KRTAP5-1Q6L8H4 278 aa3.7□□□□□ -1.82
HDAC4-205ENST00000454542 OBSCNQ5VST9 7968 aa3.67□□□□□ -1.82
HDAC4-205ENST00000454542 MUC5ACP98088 5654 aa3.65□□□□□ -1.82
HDAC4-205ENST00000454542 KRTAP4-2Q9BYR5 136 aa3.65□□□□□ -1.83
HDAC4-205ENST00000454542 LCE1EQ5T753 118 aa3.59□□□□□ -1.83
HDAC4-205ENST00000454542 MUC5BQ9HC84 5762 aaPredicted RBP3.59□□□□□ -1.84
HDAC4-205ENST00000454542 LUZP6Q538Z0 58 aa3.35□□□□□ -1.87
HDAC4-205ENST00000454542 NDUFAF8A1L188 74 aa3.34□□□□□ -1.87
HDAC4-205ENST00000454542 LCE1CQ5T751 118 aa3.33□□□□□ -1.88
HDAC4-205ENST00000454542 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
HDAC4-205ENST00000454542 LCE3DQ9BYE3 92 aa3.32□□□□□ -1.88
HDAC4-205ENST00000454542 LCE3EQ5T5B0 92 aa3.16□□□□□ -1.9
HDAC4-205ENST00000454542 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.1□□□□□ -1.91
HDAC4-205ENST00000454542 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
HDAC4-205ENST00000454542 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
HDAC4-205ENST00000454542 KRTAP21-2Q3LI59 83 aa2.84□□□□□ -1.95
HDAC4-205ENST00000454542 PHGR1C9JFL3 82 aa2.59□□□□□ -1.99
HDAC4-205ENST00000454542 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
HDAC4-205ENST00000454542 PRM1P04553 51 aa2.46□□□□□ -2.02
HDAC4-205ENST00000454542 INE1O15225 51 aa2.32□□□□□ -2.04
HDAC4-205ENST00000454542 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.04
HDAC4-205ENST00000454542 KRTAP21-1Q3LI58 79 aa1.99□□□□□ -2.09
HDAC4-205ENST00000454542 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 45.1 ms