RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 KRTAP4-9Q9BYQ8 210 aa3.78□□□□□ -1.8
DDX39A-203ENST00000454233 GPR98Q8WXG9 6306 aa3.73□□□□□ -1.81
DDX39A-203ENST00000454233 LCE4AQ5TA78 99 aa3.71□□□□□ -1.82
DDX39A-203ENST00000454233 LCE1DQ5T752 114 aa3.69□□□□□ -1.82
DDX39A-203ENST00000454233 KRTAP4-3Q9BYR4 195 aa3.69□□□□□ -1.82
DDX39A-203ENST00000454233 KRTAP12-3P60328 96 aa3.68□□□□□ -1.82
DDX39A-203ENST00000454233 MIR22HGQ0VDD5 57 aa3.68□□□□□ -1.82
DDX39A-203ENST00000454233 K7ERS5 55 aa3.66□□□□□ -1.82
DDX39A-203ENST00000454233 MT4P47944 62 aa3.66□□□□□ -1.82
DDX39A-203ENST00000454233 KRTAP25-1Q3LHN0 102 aa3.64□□□□□ -1.83
DDX39A-203ENST00000454233 V9GYY9 64 aa3.63□□□□□ -1.83
DDX39A-203ENST00000454233 KRTAP5-4Q6L8H1 288 aa3.61□□□□□ -1.83
DDX39A-203ENST00000454233 KRTAP4-7Q9BYR0 210 aa3.6□□□□□ -1.83
DDX39A-203ENST00000454233 PSPHP1O15172 72 aa3.59□□□□□ -1.83
DDX39A-203ENST00000454233 Q1T7F1 81 aa3.57□□□□□ -1.84
DDX39A-203ENST00000454233 HMCN1Q96RW7 5635 aa3.55□□□□□ -1.84
DDX39A-203ENST00000454233 KRTAP4-6Q9BYQ5 205 aa3.53□□□□□ -1.84
DDX39A-203ENST00000454233 KRTAP19-4Q3LI73 84 aa3.5□□□□□ -1.85
DDX39A-203ENST00000454233 KRTAP23-1A1A580 65 aa3.49□□□□□ -1.85
DDX39A-203ENST00000454233 A6NED7 52 aa3.49□□□□□ -1.85
DDX39A-203ENST00000454233 AHNAK2Q8IVF2 5795 aa3.46□□□□□ -1.86
DDX39A-203ENST00000454233 RPS28P62857 69 aaKnown RBP3.46□□□□□ -1.86
DDX39A-203ENST00000454233 KRTAP5-5Q701N2 237 aaPredicted RBP3.45□□□□□ -1.86
DDX39A-203ENST00000454233 KRTAP15-1Q3LI76 137 aa3.44□□□□□ -1.86
DDX39A-203ENST00000454233 CDC42SE1Q9NRR8 79 aa3.44□□□□□ -1.86
DDX39A-203ENST00000454233 KRTAP12-4P60329 112 aa3.42□□□□□ -1.86
DDX39A-203ENST00000454233 KRTAP20-2Q3LI61 65 aa3.42□□□□□ -1.86
DDX39A-203ENST00000454233 KRTAP5-10Q6L8G5 202 aa3.42□□□□□ -1.86
DDX39A-203ENST00000454233 LOC100996750A0A140TA64 210 aa3.41□□□□□ -1.86
DDX39A-203ENST00000454233 SPRR5A0A1B0GTR4 108 aa3.41□□□□□ -1.86
DDX39A-203ENST00000454233 LCE3CQ5T5A8 94 aa3.38□□□□□ -1.87
DDX39A-203ENST00000454233 ROMO1P60602 79 aa3.37□□□□□ -1.87
DDX39A-203ENST00000454233 KRTAP5-3Q6L8H2 238 aa3.36□□□□□ -1.87
DDX39A-203ENST00000454233 KRTAP5-7Q6L8G8 165 aa3.32□□□□□ -1.88
DDX39A-203ENST00000454233 MT1AP04731 61 aa3.24□□□□□ -1.89
DDX39A-203ENST00000454233 PRO0628Q9UI54 55 aa3.24□□□□□ -1.89
DDX39A-203ENST00000454233 SYNE1Q8NF91 8797 aaKnown RBP3.23□□□□□ -1.89
DDX39A-203ENST00000454233 KRTAP6-1Q3LI64 71 aa3.21□□□□□ -1.9
DDX39A-203ENST00000454233 KRTAP9-6A8MVA2 160 aa3.16□□□□□ -1.9
DDX39A-203ENST00000454233 KRTAP5-2Q701N4 177 aa3.16□□□□□ -1.9
DDX39A-203ENST00000454233 KRTAP9-4Q9BYQ2 154 aa3.13□□□□□ -1.91
DDX39A-203ENST00000454233 KRTAP4-11Q9BYQ6 195 aa3.13□□□□□ -1.91
DDX39A-203ENST00000454233 KRTAP6-2Q3LI66 62 aa3.07□□□□□ -1.92
DDX39A-203ENST00000454233 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
DDX39A-203ENST00000454233 PMAIP1Q13794 54 aa3.03□□□□□ -1.92
DDX39A-203ENST00000454233 BRK1Q8WUW1 75 aa3.03□□□□□ -1.92
DDX39A-203ENST00000454233 KRTAP5-8O75690 187 aa3.01□□□□□ -1.93
DDX39A-203ENST00000454233 MT3P25713 68 aa2.98□□□□□ -1.93
DDX39A-203ENST00000454233 KTN1-AS1Q86SY8 53 aa2.93□□□□□ -1.94
DDX39A-203ENST00000454233 KRTAP9-9Q9BYP9 154 aa2.93□□□□□ -1.94
DDX39A-203ENST00000454233 OBSCNQ5VST9 7968 aa2.92□□□□□ -1.94
DDX39A-203ENST00000454233 AHNAKQ09666 5890 aaKnown RBP2.89□□□□□ -1.95
DDX39A-203ENST00000454233 MUC5BQ9HC84 5762 aaPredicted RBP2.88□□□□□ -1.95
DDX39A-203ENST00000454233 H3BS24 57 aa2.87□□□□□ -1.95
DDX39A-203ENST00000454233 MUC5ACP98088 5654 aa2.84□□□□□ -1.95
DDX39A-203ENST00000454233 KRTAP5-1Q6L8H4 278 aa2.83□□□□□ -1.96
DDX39A-203ENST00000454233 LCE1EQ5T753 118 aa2.73□□□□□ -1.97
DDX39A-203ENST00000454233 PRAC1Q96KF2 57 aa2.67□□□□□ -1.98
DDX39A-203ENST00000454233 KRTAP4-2Q9BYR5 136 aa2.65□□□□□ -1.99
DDX39A-203ENST00000454233 LCE1BQ5T7P3 118 aa2.58□□□□□ -2
DDX39A-203ENST00000454233 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
DDX39A-203ENST00000454233 LCE3DQ9BYE3 92 aa2.45□□□□□ -2.02
DDX39A-203ENST00000454233 LUZP6Q538Z0 58 aa2.32□□□□□ -2.04
DDX39A-203ENST00000454233 LCE3EQ5T5B0 92 aa2.3□□□□□ -2.04
DDX39A-203ENST00000454233 KRTAP5-11Q6L8G4 156 aa2.29□□□□□ -2.04
DDX39A-203ENST00000454233 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
DDX39A-203ENST00000454233 NDUFAF8A1L188 74 aa2.28□□□□□ -2.04
DDX39A-203ENST00000454233 LCE1FQ5T754 118 aa2.24□□□□□ -2.05
DDX39A-203ENST00000454233 A0A0A0MQY5 61 aa2.22□□□□□ -2.05
DDX39A-203ENST00000454233 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
DDX39A-203ENST00000454233 INE1O15225 51 aa2.03□□□□□ -2.08
DDX39A-203ENST00000454233 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
DDX39A-203ENST00000454233 KRTAP4-4Q9BYR3 166 aa1.94□□□□□ -2.1
DDX39A-203ENST00000454233 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.13
DDX39A-203ENST00000454233 PRM1P04553 51 aa1.71□□□□□ -2.14
DDX39A-203ENST00000454233 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
DDX39A-203ENST00000454233 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 6.6 ms