RNA–Protein interactions for RNA: ENST00000454129.5

HCG18-239, Transcript of HLA complex group 18, humanhuman

TSL 4 BASIC

Gene HCG18, Length 4,433 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-239ENST00000454129 SSPOA2VEC9 5147 aa2.28□□□□□ -2.05
HCG18-239ENST00000454129 SYNE2Q8WXH0 6885 aaKnown RBP2.27□□□□□ -2.05
HCG18-239ENST00000454129 DSTQ03001 7570 aaKnown RBP2.26□□□□□ -2.05
HCG18-239ENST00000454129 KRTAP12-4P60329 112 aa2.24□□□□□ -2.05
HCG18-239ENST00000454129 OBSCNQ5VST9 7968 aa2.24□□□□□ -2.05
HCG18-239ENST00000454129 SPRR2DP22532 72 aa2.24□□□□□ -2.05
HCG18-239ENST00000454129 MACF1Q9UPN3 7388 aaKnown RBP2.22□□□□□ -2.05
HCG18-239ENST00000454129 LOC100996750A0A140TA64 210 aa2.22□□□□□ -2.05
HCG18-239ENST00000454129 KRTAP4-6Q9BYQ5 205 aa2.22□□□□□ -2.05
HCG18-239ENST00000454129 FCGBPQ9Y6R7 5405 aaPredicted RBP2.21□□□□□ -2.06
HCG18-239ENST00000454129 KRTAP4-7Q9BYR0 210 aa2.19□□□□□ -2.06
HCG18-239ENST00000454129 KRTAP9-6A8MVA2 160 aa2.18□□□□□ -2.06
HCG18-239ENST00000454129 MUC12Q9UKN1 5478 aa2.18□□□□□ -2.06
HCG18-239ENST00000454129 KRTAP19-3Q7Z4W3 81 aa2.18□□□□□ -2.06
HCG18-239ENST00000454129 LCE3DQ9BYE3 92 aa2.16□□□□□ -2.06
HCG18-239ENST00000454129 MT1LQ93083 61 aa2.16□□□□□ -2.06
HCG18-239ENST00000454129 MT1EP04732 61 aa2.15□□□□□ -2.07
HCG18-239ENST00000454129 KRTAP9-6A0A140TA67 174 aa2.14□□□□□ -2.07
HCG18-239ENST00000454129 KRTAP2-3P0C7H8 128 aa2.14□□□□□ -2.07
HCG18-239ENST00000454129 KRTAP2-4Q9BYR9 128 aa2.14□□□□□ -2.07
HCG18-239ENST00000454129 KRTAP2-1Q9BYU5 128 aa2.14□□□□□ -2.07
HCG18-239ENST00000454129 LCE3EQ5T5B0 92 aa2.12□□□□□ -2.07
HCG18-239ENST00000454129 KRTAP19-6Q3LI70 58 aa2.08□□□□□ -2.08
HCG18-239ENST00000454129 MT1MQ8N339 61 aa2.08□□□□□ -2.08
HCG18-239ENST00000454129 MDN1Q9NU22 5596 aa2.07□□□□□ -2.08
HCG18-239ENST00000454129 KRTAP4-3Q9BYR4 195 aa2.05□□□□□ -2.08
HCG18-239ENST00000454129 MT3P25713 68 aa2.02□□□□□ -2.09
HCG18-239ENST00000454129 MT4P47944 62 aa2.01□□□□□ -2.09
HCG18-239ENST00000454129 KRTAP19-7Q3SYF9 63 aa2.01□□□□□ -2.09
HCG18-239ENST00000454129 KRTAP9-1A8MXZ3 250 aaPredicted RBP2□□□□□ -2.09
HCG18-239ENST00000454129 KRTAP9-7A8MTY7 169 aa1.99□□□□□ -2.09
HCG18-239ENST00000454129 KRTAP5-3Q6L8H2 238 aa1.99□□□□□ -2.09
HCG18-239ENST00000454129 PRM1P04553 51 aa1.94□□□□□ -2.1
HCG18-239ENST00000454129 LCE1BQ5T7P3 118 aa1.94□□□□□ -2.1
HCG18-239ENST00000454129 LCE1DQ5T752 114 aa1.93□□□□□ -2.1
HCG18-239ENST00000454129 MT1AP04731 61 aa1.92□□□□□ -2.1
HCG18-239ENST00000454129 KRTAP4-9Q9BYQ8 210 aa1.9□□□□□ -2.1
HCG18-239ENST00000454129 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.11
HCG18-239ENST00000454129 LCE1AQ5T7P2 110 aa1.85□□□□□ -2.11
HCG18-239ENST00000454129 KRTAP6-3Q3LI67 103 aa1.84□□□□□ -2.11
HCG18-239ENST00000454129 HMCN1Q96RW7 5635 aa1.83□□□□□ -2.12
HCG18-239ENST00000454129 NEBP20929 6669 aa1.83□□□□□ -2.12
HCG18-239ENST00000454129 KRTAP6-1Q3LI64 71 aa1.82□□□□□ -2.12
HCG18-239ENST00000454129 LCE5AQ5TCM9 118 aa1.82□□□□□ -2.12
HCG18-239ENST00000454129 KRTAP9-9Q9BYP9 154 aa1.82□□□□□ -2.12
HCG18-239ENST00000454129 KRTAP9-4Q9BYQ2 154 aa1.82□□□□□ -2.12
HCG18-239ENST00000454129 KRTAP20-1Q3LI63 56 aa1.8□□□□□ -2.12
HCG18-239ENST00000454129 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.8□□□□□ -2.12
HCG18-239ENST00000454129 KRTAP6-2Q3LI66 62 aa1.8□□□□□ -2.12
HCG18-239ENST00000454129 KRTAP5-5Q701N2 237 aaPredicted RBP1.78□□□□□ -2.12
HCG18-239ENST00000454129 KRTAP5-9P26371 169 aa1.75□□□□□ -2.13
HCG18-239ENST00000454129 KRTAP2-2Q9BYT5 123 aa1.72□□□□□ -2.13
HCG18-239ENST00000454129 LCE4AQ5TA78 99 aa1.72□□□□□ -2.13
HCG18-239ENST00000454129 GPR98Q8WXG9 6306 aa1.64□□□□□ -2.15
HCG18-239ENST00000454129 KRTAP4-12Q9BQ66 201 aa1.62□□□□□ -2.15
HCG18-239ENST00000454129 LCE1CQ5T751 118 aa1.62□□□□□ -2.15
HCG18-239ENST00000454129 LCE1EQ5T753 118 aa1.62□□□□□ -2.15
HCG18-239ENST00000454129 LCE1FQ5T754 118 aa1.62□□□□□ -2.15
HCG18-239ENST00000454129 KRTAP4-2Q9BYR5 136 aa1.6□□□□□ -2.15
HCG18-239ENST00000454129 KRTAP5-2Q701N4 177 aa1.56□□□□□ -2.16
HCG18-239ENST00000454129 MUC5ACP98088 5654 aa1.49□□□□□ -2.17
HCG18-239ENST00000454129 KRTAP20-2Q3LI61 65 aa1.48□□□□□ -2.17
HCG18-239ENST00000454129 KRTAP4-11Q9BYQ6 195 aa1.45□□□□□ -2.18
HCG18-239ENST00000454129 KRTAP5-4Q6L8H1 288 aa1.45□□□□□ -2.18
HCG18-239ENST00000454129 KRTAP5-8O75690 187 aa1.44□□□□□ -2.18
HCG18-239ENST00000454129 AHNAK2Q8IVF2 5795 aa1.42□□□□□ -2.18
HCG18-239ENST00000454129 KRTAP4-4Q9BYR3 166 aa1.37□□□□□ -2.19
HCG18-239ENST00000454129 MUC5BQ9HC84 5762 aaPredicted RBP1.37□□□□□ -2.19
HCG18-239ENST00000454129 KRTAP5-10Q6L8G5 202 aa1.24□□□□□ -2.21
HCG18-239ENST00000454129 KRTAP5-1Q6L8H4 278 aa1.21□□□□□ -2.22
HCG18-239ENST00000454129 KRTAP5-7Q6L8G8 165 aa1.15□□□□□ -2.23
HCG18-239ENST00000454129 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
HCG18-239ENST00000454129 AHNAKQ09666 5890 aaKnown RBP1.14□□□□□ -2.23
HCG18-239ENST00000454129 KRTAP21-2Q3LI59 83 aa1.07□□□□□ -2.24
HCG18-239ENST00000454129 KRTAP5-11Q6L8G4 156 aa1.01□□□□□ -2.25
HCG18-239ENST00000454129 PHGR1C9JFL3 82 aa0.98□□□□□ -2.25
HCG18-239ENST00000454129 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 6.9 ms