RNA–Protein interactions for RNA: ENST00000452837.6

THUMPD3-206, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-206ENST00000452837 LOC100996750A0A140TA64 210 aa4.19□□□□□ -1.74
THUMPD3-206ENST00000452837 KRTAP4-3Q9BYR4 195 aa4.19□□□□□ -1.74
THUMPD3-206ENST00000452837 MUC12Q9UKN1 5478 aa4.17□□□□□ -1.74
THUMPD3-206ENST00000452837 KRTAP19-4Q3LI73 84 aa4.11□□□□□ -1.75
THUMPD3-206ENST00000452837 MT1GP13640 62 aa4.09□□□□□ -1.75
THUMPD3-206ENST00000452837 KRTAP19-6Q3LI70 58 aa4.09□□□□□ -1.75
THUMPD3-206ENST00000452837 CRCT1Q9UGL9 99 aa4.03□□□□□ -1.76
THUMPD3-206ENST00000452837 MT1MQ8N339 61 aa4.01□□□□□ -1.77
THUMPD3-206ENST00000452837 DSTQ03001 7570 aaKnown RBP4□□□□□ -1.77
THUMPD3-206ENST00000452837 KRTAP19-3Q7Z4W3 81 aa3.97□□□□□ -1.77
THUMPD3-206ENST00000452837 KRTAP9-2Q9BYQ4 174 aa3.91□□□□□ -1.78
THUMPD3-206ENST00000452837 KRTAP12-4P60329 112 aa3.89□□□□□ -1.79
THUMPD3-206ENST00000452837 LCE5AQ5TCM9 118 aa3.83□□□□□ -1.8
THUMPD3-206ENST00000452837 KRTAP4-9Q9BYQ8 210 aa3.83□□□□□ -1.8
THUMPD3-206ENST00000452837 MACF1Q9UPN3 7388 aaKnown RBP3.81□□□□□ -1.8
THUMPD3-206ENST00000452837 LCE3BQ5TA77 95 aa3.81□□□□□ -1.8
THUMPD3-206ENST00000452837 SPRR2FQ96RM1 72 aa3.8□□□□□ -1.8
THUMPD3-206ENST00000452837 SYNE1Q8NF91 8797 aaKnown RBP3.77□□□□□ -1.81
THUMPD3-206ENST00000452837 MDN1Q9NU22 5596 aa3.75□□□□□ -1.81
THUMPD3-206ENST00000452837 SYNE2Q8WXH0 6885 aaKnown RBP3.71□□□□□ -1.82
THUMPD3-206ENST00000452837 KRTAP6-1Q3LI64 71 aa3.7□□□□□ -1.82
THUMPD3-206ENST00000452837 KRTAP9-4Q9BYQ2 154 aa3.7□□□□□ -1.82
THUMPD3-206ENST00000452837 MT1AP04731 61 aa3.61□□□□□ -1.83
THUMPD3-206ENST00000452837 KRTAP9-9Q9BYP9 154 aa3.59□□□□□ -1.84
THUMPD3-206ENST00000452837 KRTAP5-9P26371 169 aa3.57□□□□□ -1.84
THUMPD3-206ENST00000452837 KRTAP9-7A8MTY7 169 aa3.56□□□□□ -1.84
THUMPD3-206ENST00000452837 LCE3DQ9BYE3 92 aa3.56□□□□□ -1.84
THUMPD3-206ENST00000452837 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
THUMPD3-206ENST00000452837 KRTAP5-5Q701N2 237 aaPredicted RBP3.55□□□□□ -1.84
THUMPD3-206ENST00000452837 KRTAP9-6A0A140TA67 174 aa3.53□□□□□ -1.84
THUMPD3-206ENST00000452837 LCE1AQ5T7P2 110 aa3.52□□□□□ -1.85
THUMPD3-206ENST00000452837 LCE3EQ5T5B0 92 aa3.51□□□□□ -1.85
THUMPD3-206ENST00000452837 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.5□□□□□ -1.85
THUMPD3-206ENST00000452837 PRM1P04553 51 aa3.49□□□□□ -1.85
THUMPD3-206ENST00000452837 LCE4AQ5TA78 99 aa3.49□□□□□ -1.85
THUMPD3-206ENST00000452837 SPRR2EP22531 72 aa3.44□□□□□ -1.86
THUMPD3-206ENST00000452837 SPRR2BP35325 72 aa3.44□□□□□ -1.86
THUMPD3-206ENST00000452837 SPRR2AP35326 72 aa3.44□□□□□ -1.86
THUMPD3-206ENST00000452837 KRTAP6-3Q3LI67 103 aa3.43□□□□□ -1.86
THUMPD3-206ENST00000452837 KRTAP2-2Q9BYT5 123 aa3.43□□□□□ -1.86
THUMPD3-206ENST00000452837 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
THUMPD3-206ENST00000452837 KRTAP6-2Q3LI66 62 aa3.35□□□□□ -1.87
THUMPD3-206ENST00000452837 SPRR2DP22532 72 aa3.3□□□□□ -1.88
THUMPD3-206ENST00000452837 NEBP20929 6669 aa3.26□□□□□ -1.89
THUMPD3-206ENST00000452837 MT3P25713 68 aa3.19□□□□□ -1.9
THUMPD3-206ENST00000452837 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
THUMPD3-206ENST00000452837 KRTAP4-6Q9BYQ5 205 aa3.11□□□□□ -1.91
THUMPD3-206ENST00000452837 KRTAP5-4Q6L8H1 288 aa3.02□□□□□ -1.93
THUMPD3-206ENST00000452837 LCE1DQ5T752 114 aa2.95□□□□□ -1.94
THUMPD3-206ENST00000452837 HMCN1Q96RW7 5635 aa2.93□□□□□ -1.94
THUMPD3-206ENST00000452837 MT4P47944 62 aa2.92□□□□□ -1.94
THUMPD3-206ENST00000452837 KRTAP20-1Q3LI63 56 aa2.88□□□□□ -1.95
THUMPD3-206ENST00000452837 KRTAP20-2Q3LI61 65 aa2.85□□□□□ -1.95
THUMPD3-206ENST00000452837 MUC5ACP98088 5654 aa2.85□□□□□ -1.95
THUMPD3-206ENST00000452837 KRTAP5-2Q701N4 177 aa2.83□□□□□ -1.96
THUMPD3-206ENST00000452837 KRTAP4-12Q9BQ66 201 aa2.83□□□□□ -1.96
THUMPD3-206ENST00000452837 KRTAP5-3Q6L8H2 238 aa2.76□□□□□ -1.97
THUMPD3-206ENST00000452837 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
THUMPD3-206ENST00000452837 KRTAP4-11Q9BYQ6 195 aa2.66□□□□□ -1.98
THUMPD3-206ENST00000452837 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
THUMPD3-206ENST00000452837 KRTAP5-10Q6L8G5 202 aa2.62□□□□□ -1.99
THUMPD3-206ENST00000452837 KRTAP5-1Q6L8H4 278 aa2.54□□□□□ -2
THUMPD3-206ENST00000452837 KRTAP4-2Q9BYR5 136 aa2.5□□□□□ -2.01
THUMPD3-206ENST00000452837 MUC5BQ9HC84 5762 aaPredicted RBP2.44□□□□□ -2.02
THUMPD3-206ENST00000452837 LCE1CQ5T751 118 aa2.43□□□□□ -2.02
THUMPD3-206ENST00000452837 AHNAK2Q8IVF2 5795 aa2.41□□□□□ -2.02
THUMPD3-206ENST00000452837 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
THUMPD3-206ENST00000452837 KRTAP5-8O75690 187 aa2.33□□□□□ -2.04
THUMPD3-206ENST00000452837 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.28□□□□□ -2.04
THUMPD3-206ENST00000452837 KRTAP5-7Q6L8G8 165 aa2.26□□□□□ -2.05
THUMPD3-206ENST00000452837 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
THUMPD3-206ENST00000452837 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
THUMPD3-206ENST00000452837 GPR98Q8WXG9 6306 aa2.1□□□□□ -2.07
THUMPD3-206ENST00000452837 KRTAP5-11Q6L8G4 156 aa2.07□□□□□ -2.08
THUMPD3-206ENST00000452837 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
THUMPD3-206ENST00000452837 AHNAKQ09666 5890 aaKnown RBP1.72□□□□□ -2.13
THUMPD3-206ENST00000452837 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 8.1 ms