RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 KRTAP9-6A8MVA2 160 aa3.89□□□□□ -1.79
DDR1-239ENST00000452441 LOC100996750A0A140TA64 210 aa3.87□□□□□ -1.79
DDR1-239ENST00000452441 MT1GP13640 62 aa3.87□□□□□ -1.79
DDR1-239ENST00000452441 KRTAP19-7Q3SYF9 63 aa3.84□□□□□ -1.79
DDR1-239ENST00000452441 MACF1Q9UPN3 7388 aaKnown RBP3.8□□□□□ -1.8
DDR1-239ENST00000452441 MT1EP04732 61 aa3.77□□□□□ -1.81
DDR1-239ENST00000452441 MT1LQ93083 61 aa3.77□□□□□ -1.81
DDR1-239ENST00000452441 KRTAP9-2Q9BYQ4 174 aa3.73□□□□□ -1.81
DDR1-239ENST00000452441 KRTAP19-6Q3LI70 58 aa3.71□□□□□ -1.81
DDR1-239ENST00000452441 LCE3BQ5TA77 95 aa3.7□□□□□ -1.82
DDR1-239ENST00000452441 KRTAP2-3P0C7H8 128 aa3.7□□□□□ -1.82
DDR1-239ENST00000452441 KRTAP2-4Q9BYR9 128 aa3.7□□□□□ -1.82
DDR1-239ENST00000452441 KRTAP2-1Q9BYU5 128 aa3.7□□□□□ -1.82
DDR1-239ENST00000452441 SPRR2EP22531 72 aa3.65□□□□□ -1.83
DDR1-239ENST00000452441 SPRR2BP35325 72 aa3.65□□□□□ -1.83
DDR1-239ENST00000452441 SPRR2AP35326 72 aa3.65□□□□□ -1.83
DDR1-239ENST00000452441 MDN1Q9NU22 5596 aa3.64□□□□□ -1.83
DDR1-239ENST00000452441 KRTAP19-3Q7Z4W3 81 aa3.63□□□□□ -1.83
DDR1-239ENST00000452441 KRTAP12-4P60329 112 aa3.6□□□□□ -1.83
DDR1-239ENST00000452441 KRTAP4-9Q9BYQ8 210 aa3.6□□□□□ -1.83
DDR1-239ENST00000452441 MT1MQ8N339 61 aa3.59□□□□□ -1.83
DDR1-239ENST00000452441 LCE2DQ5TA82 110 aaPredicted RBP3.57□□□□□ -1.84
DDR1-239ENST00000452441 KRTAP19-4Q3LI73 84 aa3.57□□□□□ -1.84
DDR1-239ENST00000452441 KRTAP9-6A0A140TA67 174 aa3.47□□□□□ -1.85
DDR1-239ENST00000452441 SPRR2DP22532 72 aa3.47□□□□□ -1.85
DDR1-239ENST00000452441 LCE5AQ5TCM9 118 aa3.35□□□□□ -1.87
DDR1-239ENST00000452441 LCE3DQ9BYE3 92 aa3.3□□□□□ -1.88
DDR1-239ENST00000452441 KRTAP6-1Q3LI64 71 aa3.3□□□□□ -1.88
DDR1-239ENST00000452441 MT4P47944 62 aa3.29□□□□□ -1.88
DDR1-239ENST00000452441 LCE1AQ5T7P2 110 aa3.28□□□□□ -1.88
DDR1-239ENST00000452441 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.24□□□□□ -1.89
DDR1-239ENST00000452441 KRTAP9-7A8MTY7 169 aa3.24□□□□□ -1.89
DDR1-239ENST00000452441 LCE3EQ5T5B0 92 aa3.2□□□□□ -1.9
DDR1-239ENST00000452441 PRM1P04553 51 aa3.18□□□□□ -1.9
DDR1-239ENST00000452441 MT1AP04731 61 aa3.16□□□□□ -1.9
DDR1-239ENST00000452441 MUC19Q7Z5P9 8384 aa3.16□□□□□ -1.9
DDR1-239ENST00000452441 KRTAP6-2Q3LI66 62 aa3.08□□□□□ -1.92
DDR1-239ENST00000452441 KRTAP6-3Q3LI67 103 aa3.05□□□□□ -1.92
DDR1-239ENST00000452441 KRTAP5-9P26371 169 aa3.03□□□□□ -1.92
DDR1-239ENST00000452441 KRTAP5-5Q701N2 237 aaPredicted RBP3.03□□□□□ -1.92
DDR1-239ENST00000452441 MT3P25713 68 aa3.02□□□□□ -1.93
DDR1-239ENST00000452441 KRTAP2-2Q9BYT5 123 aa3□□□□□ -1.93
DDR1-239ENST00000452441 LCE1DQ5T752 114 aa2.98□□□□□ -1.93
DDR1-239ENST00000452441 NEBP20929 6669 aa2.98□□□□□ -1.93
DDR1-239ENST00000452441 KRTAP9-4Q9BYQ2 154 aa2.97□□□□□ -1.93
DDR1-239ENST00000452441 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
DDR1-239ENST00000452441 KRTAP4-6Q9BYQ5 205 aa2.92□□□□□ -1.94
DDR1-239ENST00000452441 KRTAP20-1Q3LI63 56 aa2.9□□□□□ -1.95
DDR1-239ENST00000452441 LCE1EQ5T753 118 aa2.89□□□□□ -1.95
DDR1-239ENST00000452441 GPR98Q8WXG9 6306 aa2.87□□□□□ -1.95
DDR1-239ENST00000452441 MUC5ACP98088 5654 aa2.76□□□□□ -1.97
DDR1-239ENST00000452441 HMCN1Q96RW7 5635 aa2.71□□□□□ -1.98
DDR1-239ENST00000452441 LCE1FQ5T754 118 aa2.71□□□□□ -1.98
DDR1-239ENST00000452441 LCE4AQ5TA78 99 aa2.66□□□□□ -1.98
DDR1-239ENST00000452441 KRTAP20-2Q3LI61 65 aa2.65□□□□□ -1.98
DDR1-239ENST00000452441 KRTAP5-4Q6L8H1 288 aa2.63□□□□□ -1.99
DDR1-239ENST00000452441 KRTAP4-11Q9BYQ6 195 aa2.5□□□□□ -2.01
DDR1-239ENST00000452441 KRTAP5-2Q701N4 177 aa2.46□□□□□ -2.02
DDR1-239ENST00000452441 KRTAP4-4Q9BYR3 166 aa2.39□□□□□ -2.03
DDR1-239ENST00000452441 KRTAP5-3Q6L8H2 238 aa2.38□□□□□ -2.03
DDR1-239ENST00000452441 AHNAK2Q8IVF2 5795 aa2.35□□□□□ -2.03
DDR1-239ENST00000452441 KRTAP4-12Q9BQ66 201 aa2.35□□□□□ -2.03
DDR1-239ENST00000452441 KRTAP4-2Q9BYR5 136 aa2.35□□□□□ -2.03
DDR1-239ENST00000452441 MUC5BQ9HC84 5762 aaPredicted RBP2.33□□□□□ -2.04
DDR1-239ENST00000452441 LCE1CQ5T751 118 aa2.24□□□□□ -2.05
DDR1-239ENST00000452441 KRTAP5-10Q6L8G5 202 aa2.22□□□□□ -2.05
DDR1-239ENST00000452441 KRTAP9-9Q9BYP9 154 aa2.17□□□□□ -2.06
DDR1-239ENST00000452441 KRTAP5-1Q6L8H4 278 aa2.14□□□□□ -2.07
DDR1-239ENST00000452441 KRTAP5-8O75690 187 aa2.11□□□□□ -2.07
DDR1-239ENST00000452441 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
DDR1-239ENST00000452441 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.94□□□□□ -2.1
DDR1-239ENST00000452441 AHNAKQ09666 5890 aaKnown RBP1.93□□□□□ -2.1
DDR1-239ENST00000452441 KRTAP5-7Q6L8G8 165 aa1.87□□□□□ -2.11
DDR1-239ENST00000452441 KRTAP21-1Q3LI58 79 aa1.82□□□□□ -2.12
DDR1-239ENST00000452441 KRTAP5-11Q6L8G4 156 aa1.78□□□□□ -2.12
DDR1-239ENST00000452441 PHGR1C9JFL3 82 aa1.57□□□□□ -2.16
DDR1-239ENST00000452441 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 10.5 ms