RNA–Protein interactions for RNA: ENST00000451405.1

RPUSD3-209, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-209ENST00000451405 KRTAP4-3Q9BYR4 195 aa5.77□□□□□ -1.49
RPUSD3-209ENST00000451405 KRTAP4-6Q9BYQ5 205 aa5.76□□□□□ -1.49
RPUSD3-209ENST00000451405 SPRR5A0A1B0GTR4 108 aa5.74□□□□□ -1.49
RPUSD3-209ENST00000451405 TNP1P09430 55 aa5.71□□□□□ -1.5
RPUSD3-209ENST00000451405 KRTAP5-4Q6L8H1 288 aa5.71□□□□□ -1.5
RPUSD3-209ENST00000451405 KRTAP5-3Q6L8H2 238 aa5.71□□□□□ -1.5
RPUSD3-209ENST00000451405 ANAPC13Q9BS18 74 aa5.65□□□□□ -1.5
RPUSD3-209ENST00000451405 CCDC179H3BU77 68 aa5.61□□□□□ -1.51
RPUSD3-209ENST00000451405 KRTAP4-7Q9BYR0 210 aa5.6□□□□□ -1.51
RPUSD3-209ENST00000451405 PRR15LQ9BU68 103 aa5.56□□□□□ -1.52
RPUSD3-209ENST00000451405 KRTAP12-3P60328 96 aa5.54□□□□□ -1.52
RPUSD3-209ENST00000451405 LINC01558Q9Y6Z2 57 aa5.54□□□□□ -1.52
RPUSD3-209ENST00000451405 ATP5EP56381 51 aaPredicted RBP5.49□□□□□ -1.53
RPUSD3-209ENST00000451405 KRTAP20-2Q3LI61 65 aa5.46□□□□□ -1.54
RPUSD3-209ENST00000451405 UQCR11O14957 56 aa5.41□□□□□ -1.54
RPUSD3-209ENST00000451405 KRTAP5-5Q701N2 237 aaPredicted RBP5.38□□□□□ -1.55
RPUSD3-209ENST00000451405 KRTAP12-4P60329 112 aa5.33□□□□□ -1.56
RPUSD3-209ENST00000451405 LOC100996750A0A140TA64 210 aa5.31□□□□□ -1.56
RPUSD3-209ENST00000451405 KRTAP25-1Q3LHN0 102 aa5.31□□□□□ -1.56
RPUSD3-209ENST00000451405 TMEM258P61165 79 aa5.3□□□□□ -1.56
RPUSD3-209ENST00000451405 MIR22HGQ0VDD5 57 aa5.29□□□□□ -1.56
RPUSD3-209ENST00000451405 SYNE1Q8NF91 8797 aaKnown RBP5.25□□□□□ -1.57
RPUSD3-209ENST00000451405 AHNAKQ09666 5890 aaKnown RBP5.22□□□□□ -1.57
RPUSD3-209ENST00000451405 KRTAP19-4Q3LI73 84 aa5.16□□□□□ -1.58
RPUSD3-209ENST00000451405 K7ERS5 55 aa5.15□□□□□ -1.59
RPUSD3-209ENST00000451405 KRTAP4-11Q9BYQ6 195 aa5.15□□□□□ -1.59
RPUSD3-209ENST00000451405 KRTAP15-1Q3LI76 137 aa5.13□□□□□ -1.59
RPUSD3-209ENST00000451405 PSPHP1O15172 72 aa5.12□□□□□ -1.59
RPUSD3-209ENST00000451405 KRTAP23-1A1A580 65 aa5.11□□□□□ -1.59
RPUSD3-209ENST00000451405 MUC5ACP98088 5654 aa5.1□□□□□ -1.59
RPUSD3-209ENST00000451405 LCE3CQ5T5A8 94 aa5.1□□□□□ -1.59
RPUSD3-209ENST00000451405 MUC5BQ9HC84 5762 aaPredicted RBP5.09□□□□□ -1.6
RPUSD3-209ENST00000451405 Q1T7F1 81 aa5.05□□□□□ -1.6
RPUSD3-209ENST00000451405 V9GYY9 64 aa5.04□□□□□ -1.6
RPUSD3-209ENST00000451405 KRTAP5-8O75690 187 aa4.99□□□□□ -1.61
RPUSD3-209ENST00000451405 KRTAP6-1Q3LI64 71 aa4.97□□□□□ -1.61
RPUSD3-209ENST00000451405 MT1AP04731 61 aa4.95□□□□□ -1.62
RPUSD3-209ENST00000451405 KRTAP5-2Q701N4 177 aa4.92□□□□□ -1.62
RPUSD3-209ENST00000451405 A6NED7 52 aa4.9□□□□□ -1.63
RPUSD3-209ENST00000451405 CDC42SE1Q9NRR8 79 aa4.89□□□□□ -1.63
RPUSD3-209ENST00000451405 KRTAP9-9Q9BYP9 154 aa4.88□□□□□ -1.63
RPUSD3-209ENST00000451405 KRTAP9-6A8MVA2 160 aa4.87□□□□□ -1.63
RPUSD3-209ENST00000451405 ROMO1P60602 79 aa4.83□□□□□ -1.64
RPUSD3-209ENST00000451405 KRTAP9-4Q9BYQ2 154 aa4.82□□□□□ -1.64
RPUSD3-209ENST00000451405 RPS28P62857 69 aaKnown RBP4.8□□□□□ -1.64
RPUSD3-209ENST00000451405 KRTAP6-2Q3LI66 62 aa4.75□□□□□ -1.65
RPUSD3-209ENST00000451405 OBSCNQ5VST9 7968 aa4.72□□□□□ -1.65
RPUSD3-209ENST00000451405 PCP4P48539 62 aa4.63□□□□□ -1.67
RPUSD3-209ENST00000451405 MT3P25713 68 aa4.52□□□□□ -1.69
RPUSD3-209ENST00000451405 KRTAP5-1Q6L8H4 278 aa4.5□□□□□ -1.69
RPUSD3-209ENST00000451405 LCE1EQ5T753 118 aa4.18□□□□□ -1.74
RPUSD3-209ENST00000451405 SVIPQ8NHG7 77 aa4.02□□□□□ -1.77
RPUSD3-209ENST00000451405 BRK1Q8WUW1 75 aa4.01□□□□□ -1.77
RPUSD3-209ENST00000451405 LCE1BQ5T7P3 118 aa4□□□□□ -1.77
RPUSD3-209ENST00000451405 KRTAP4-2Q9BYR5 136 aa4□□□□□ -1.77
RPUSD3-209ENST00000451405 LCE1CQ5T751 118 aa3.89□□□□□ -1.79
RPUSD3-209ENST00000451405 KRTAP4-12Q9BQ66 201 aa3.85□□□□□ -1.79
RPUSD3-209ENST00000451405 PMAIP1Q13794 54 aa3.78□□□□□ -1.8
RPUSD3-209ENST00000451405 PRAC1Q96KF2 57 aa3.73□□□□□ -1.81
RPUSD3-209ENST00000451405 PRO0628Q9UI54 55 aa3.69□□□□□ -1.82
RPUSD3-209ENST00000451405 LCE3DQ9BYE3 92 aa3.64□□□□□ -1.83
RPUSD3-209ENST00000451405 KRTAP5-11Q6L8G4 156 aa3.58□□□□□ -1.84
RPUSD3-209ENST00000451405 LCE1FQ5T754 118 aa3.57□□□□□ -1.84
RPUSD3-209ENST00000451405 PHGR1C9JFL3 82 aa3.56□□□□□ -1.84
RPUSD3-209ENST00000451405 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.52□□□□□ -1.85
RPUSD3-209ENST00000451405 KTN1-AS1Q86SY8 53 aa3.47□□□□□ -1.85
RPUSD3-209ENST00000451405 LCE3EQ5T5B0 92 aa3.39□□□□□ -1.87
RPUSD3-209ENST00000451405 KRTAP21-2Q3LI59 83 aa3.27□□□□□ -1.89
RPUSD3-209ENST00000451405 LUZP6Q538Z0 58 aa3.08□□□□□ -1.92
RPUSD3-209ENST00000451405 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
RPUSD3-209ENST00000451405 H3BS24 57 aa2.99□□□□□ -1.93
RPUSD3-209ENST00000451405 MUC19Q7Z5P9 8384 aa2.94□□□□□ -1.94
RPUSD3-209ENST00000451405 KRTAP21-1Q3LI58 79 aa2.71□□□□□ -1.98
RPUSD3-209ENST00000451405 NDUFAF8A1L188 74 aa2.6□□□□□ -1.99
RPUSD3-209ENST00000451405 PRM1P04553 51 aa2.48□□□□□ -2.01
RPUSD3-209ENST00000451405 A0A0A0MQY5 61 aa2.38□□□□□ -2.03
RPUSD3-209ENST00000451405 INE1O15225 51 aa2.23□□□□□ -2.05
RPUSD3-209ENST00000451405 MUC16Q8WXI7 14507 aa2.04□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 105.1 ms