RNA–Protein interactions for RNA: ENST00000451343.4

TNXB-203, Transcript of tenascin XB, humanhuman

TSL 1 (best) BASIC

Gene TNXB, Length 3,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-203ENST00000451343 KRTAP2-3P0C7H8 128 aa3.91□□□□□ -1.78
TNXB-203ENST00000451343 KRTAP2-4Q9BYR9 128 aa3.91□□□□□ -1.78
TNXB-203ENST00000451343 KRTAP2-1Q9BYU5 128 aa3.91□□□□□ -1.78
TNXB-203ENST00000451343 MACF1Q9UPN3 7388 aaKnown RBP3.88□□□□□ -1.79
TNXB-203ENST00000451343 DSTQ03001 7570 aaKnown RBP3.88□□□□□ -1.79
TNXB-203ENST00000451343 KRTAP2-2Q9BYT5 123 aa3.88□□□□□ -1.79
TNXB-203ENST00000451343 KRTAP4-3Q9BYR4 195 aa3.86□□□□□ -1.79
TNXB-203ENST00000451343 SYNE2Q8WXH0 6885 aaKnown RBP3.85□□□□□ -1.79
TNXB-203ENST00000451343 LOC100996750A0A140TA64 210 aa3.84□□□□□ -1.79
TNXB-203ENST00000451343 CRCT1Q9UGL9 99 aa3.79□□□□□ -1.8
TNXB-203ENST00000451343 MT1GP13640 62 aa3.77□□□□□ -1.81
TNXB-203ENST00000451343 LCE1AQ5T7P2 110 aa3.77□□□□□ -1.81
TNXB-203ENST00000451343 SPRR2FQ96RM1 72 aa3.76□□□□□ -1.81
TNXB-203ENST00000451343 KRTAP19-4Q3LI73 84 aa3.72□□□□□ -1.81
TNXB-203ENST00000451343 KRTAP6-3Q3LI67 103 aa3.7□□□□□ -1.82
TNXB-203ENST00000451343 LCE1EQ5T753 118 aa3.69□□□□□ -1.82
TNXB-203ENST00000451343 MT1MQ8N339 61 aa3.68□□□□□ -1.82
TNXB-203ENST00000451343 MDN1Q9NU22 5596 aa3.66□□□□□ -1.82
TNXB-203ENST00000451343 KRTAP19-3Q7Z4W3 81 aa3.65□□□□□ -1.83
TNXB-203ENST00000451343 KRTAP12-4P60329 112 aa3.61□□□□□ -1.83
TNXB-203ENST00000451343 OBSCNQ5VST9 7968 aa3.6□□□□□ -1.83
TNXB-203ENST00000451343 KRTAP9-6A0A140TA67 174 aa3.6□□□□□ -1.83
TNXB-203ENST00000451343 SYNE1Q8NF91 8797 aaKnown RBP3.58□□□□□ -1.84
TNXB-203ENST00000451343 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.53□□□□□ -1.84
TNXB-203ENST00000451343 KRTAP5-9P26371 169 aa3.53□□□□□ -1.84
TNXB-203ENST00000451343 LCE3BQ5TA77 95 aa3.52□□□□□ -1.85
TNXB-203ENST00000451343 LCE5AQ5TCM9 118 aa3.51□□□□□ -1.85
TNXB-203ENST00000451343 LCE1DQ5T752 114 aa3.51□□□□□ -1.85
TNXB-203ENST00000451343 KRTAP4-9Q9BYQ8 210 aa3.51□□□□□ -1.85
TNXB-203ENST00000451343 SPRR2EP22531 72 aa3.48□□□□□ -1.85
TNXB-203ENST00000451343 SPRR2BP35325 72 aa3.48□□□□□ -1.85
TNXB-203ENST00000451343 SPRR2AP35326 72 aa3.48□□□□□ -1.85
TNXB-203ENST00000451343 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
TNXB-203ENST00000451343 KRTAP6-1Q3LI64 71 aa3.39□□□□□ -1.87
TNXB-203ENST00000451343 PRM1P04553 51 aa3.33□□□□□ -1.88
TNXB-203ENST00000451343 SPRR2DP22532 72 aa3.32□□□□□ -1.88
TNXB-203ENST00000451343 KRTAP9-7A8MTY7 169 aa3.3□□□□□ -1.88
TNXB-203ENST00000451343 MT1AP04731 61 aa3.28□□□□□ -1.88
TNXB-203ENST00000451343 NEBP20929 6669 aa3.27□□□□□ -1.89
TNXB-203ENST00000451343 LCE3DQ9BYE3 92 aa3.26□□□□□ -1.89
TNXB-203ENST00000451343 LCE3EQ5T5B0 92 aa3.2□□□□□ -1.9
TNXB-203ENST00000451343 KRTAP5-5Q701N2 237 aaPredicted RBP3.2□□□□□ -1.9
TNXB-203ENST00000451343 KRTAP9-4Q9BYQ2 154 aa3.08□□□□□ -1.92
TNXB-203ENST00000451343 KRTAP6-2Q3LI66 62 aa3.05□□□□□ -1.92
TNXB-203ENST00000451343 MT4P47944 62 aa3.02□□□□□ -1.93
TNXB-203ENST00000451343 KRTAP5-4Q6L8H1 288 aa2.96□□□□□ -1.94
TNXB-203ENST00000451343 KRTAP4-6Q9BYQ5 205 aa2.96□□□□□ -1.94
TNXB-203ENST00000451343 MUC19Q7Z5P9 8384 aa2.94□□□□□ -1.94
TNXB-203ENST00000451343 MT3P25713 68 aa2.93□□□□□ -1.94
TNXB-203ENST00000451343 KRTAP20-1Q3LI63 56 aa2.89□□□□□ -1.95
TNXB-203ENST00000451343 HMCN1Q96RW7 5635 aa2.84□□□□□ -1.95
TNXB-203ENST00000451343 LCE4AQ5TA78 99 aa2.82□□□□□ -1.96
TNXB-203ENST00000451343 KRTAP20-2Q3LI61 65 aa2.77□□□□□ -1.97
TNXB-203ENST00000451343 KRTAP9-9Q9BYP9 154 aa2.75□□□□□ -1.97
TNXB-203ENST00000451343 KRTAP5-2Q701N4 177 aa2.7□□□□□ -1.98
TNXB-203ENST00000451343 KRTAP5-3Q6L8H2 238 aa2.69□□□□□ -1.98
TNXB-203ENST00000451343 MUC5ACP98088 5654 aa2.6□□□□□ -1.99
TNXB-203ENST00000451343 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
TNXB-203ENST00000451343 AHNAK2Q8IVF2 5795 aa2.48□□□□□ -2.01
TNXB-203ENST00000451343 KRTAP4-11Q9BYQ6 195 aa2.46□□□□□ -2.02
TNXB-203ENST00000451343 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
TNXB-203ENST00000451343 KRTAP5-10Q6L8G5 202 aa2.37□□□□□ -2.03
TNXB-203ENST00000451343 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
TNXB-203ENST00000451343 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
TNXB-203ENST00000451343 KRTAP4-2Q9BYR5 136 aa2.28□□□□□ -2.04
TNXB-203ENST00000451343 KRTAP5-7Q6L8G8 165 aa2.23□□□□□ -2.05
TNXB-203ENST00000451343 GPR98Q8WXG9 6306 aa2.21□□□□□ -2.06
TNXB-203ENST00000451343 MUC5BQ9HC84 5762 aaPredicted RBP2.19□□□□□ -2.06
TNXB-203ENST00000451343 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
TNXB-203ENST00000451343 KRTAP21-1Q3LI58 79 aa2.1□□□□□ -2.07
TNXB-203ENST00000451343 KRTAP4-4Q9BYR3 166 aa2.1□□□□□ -2.07
TNXB-203ENST00000451343 KRTAP4-12Q9BQ66 201 aa2.08□□□□□ -2.08
TNXB-203ENST00000451343 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
TNXB-203ENST00000451343 KRTAP5-11Q6L8G4 156 aa1.94□□□□□ -2.1
TNXB-203ENST00000451343 AHNAKQ09666 5890 aaKnown RBP1.81□□□□□ -2.12
TNXB-203ENST00000451343 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
TNXB-203ENST00000451343 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 44.9 ms