RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 LCE3AQ5TA76 89 aa2.59□□□□□ -1.99
USP46-202ENST00000451218 KRTAP4-11Q9BYQ6 195 aa2.57□□□□□ -2
USP46-202ENST00000451218 FSIP2Q5CZC0 6907 aa2.57□□□□□ -2
USP46-202ENST00000451218 KRTAP19-6Q3LI70 58 aa2.57□□□□□ -2
USP46-202ENST00000451218 KRTAP4-9Q9BYQ8 210 aa2.57□□□□□ -2
USP46-202ENST00000451218 KRTAP8-1Q8IUC2 63 aa2.56□□□□□ -2
USP46-202ENST00000451218 KRTAP4-7Q9BYR0 210 aa2.55□□□□□ -2
USP46-202ENST00000451218 SPRR5A0A1B0GTR4 108 aa2.53□□□□□ -2
USP46-202ENST00000451218 KRTAP19-7Q3SYF9 63 aa2.51□□□□□ -2.01
USP46-202ENST00000451218 LCE3CQ5T5A8 94 aa2.5□□□□□ -2.01
USP46-202ENST00000451218 KRTAP19-5Q3LI72 72 aa2.46□□□□□ -2.02
USP46-202ENST00000451218 LCE1AQ5T7P2 110 aa2.46□□□□□ -2.02
USP46-202ENST00000451218 MACF1Q9UPN3 7388 aaKnown RBP2.46□□□□□ -2.02
USP46-202ENST00000451218 MUC12Q9UKN1 5478 aa2.46□□□□□ -2.02
USP46-202ENST00000451218 KRTAP2-2Q9BYT5 123 aa2.42□□□□□ -2.02
USP46-202ENST00000451218 KRTAP12-3P60328 96 aa2.41□□□□□ -2.02
USP46-202ENST00000451218 MT1EP04732 61 aa2.4□□□□□ -2.02
USP46-202ENST00000451218 KRTAP9-6A8MVA2 160 aa2.39□□□□□ -2.03
USP46-202ENST00000451218 SYNE2Q8WXH0 6885 aaKnown RBP2.37□□□□□ -2.03
USP46-202ENST00000451218 MDN1Q9NU22 5596 aa2.37□□□□□ -2.03
USP46-202ENST00000451218 KRTAP4-2Q9BYR5 136 aa2.37□□□□□ -2.03
USP46-202ENST00000451218 MT1LQ93083 61 aa2.36□□□□□ -2.03
USP46-202ENST00000451218 LCE1FQ5T754 118 aa2.35□□□□□ -2.03
USP46-202ENST00000451218 KRTAP12-4P60329 112 aa2.33□□□□□ -2.04
USP46-202ENST00000451218 CRCT1Q9UGL9 99 aa2.3□□□□□ -2.04
USP46-202ENST00000451218 KRTAP5-9P26371 169 aa2.29□□□□□ -2.04
USP46-202ENST00000451218 KRTAP4-3Q9BYR4 195 aa2.27□□□□□ -2.05
USP46-202ENST00000451218 LCE3EQ5T5B0 92 aa2.26□□□□□ -2.05
USP46-202ENST00000451218 SPRR2FQ96RM1 72 aa2.25□□□□□ -2.05
USP46-202ENST00000451218 MT1MQ8N339 61 aa2.24□□□□□ -2.05
USP46-202ENST00000451218 KRTAP19-3Q7Z4W3 81 aa2.23□□□□□ -2.05
USP46-202ENST00000451218 SPRR2EP22531 72 aa2.22□□□□□ -2.05
USP46-202ENST00000451218 SPRR2BP35325 72 aa2.22□□□□□ -2.05
USP46-202ENST00000451218 SPRR2AP35326 72 aa2.22□□□□□ -2.05
USP46-202ENST00000451218 SPRR2DP22532 72 aa2.21□□□□□ -2.06
USP46-202ENST00000451218 DSTQ03001 7570 aaKnown RBP2.18□□□□□ -2.06
USP46-202ENST00000451218 KRTAP2-3P0C7H8 128 aa2.17□□□□□ -2.06
USP46-202ENST00000451218 KRTAP2-4Q9BYR9 128 aa2.17□□□□□ -2.06
USP46-202ENST00000451218 KRTAP2-1Q9BYU5 128 aa2.17□□□□□ -2.06
USP46-202ENST00000451218 MT1GP13640 62 aa2.17□□□□□ -2.06
USP46-202ENST00000451218 KRTAP5-5Q701N2 237 aaPredicted RBP2.16□□□□□ -2.06
USP46-202ENST00000451218 KRTAP5-3Q6L8H2 238 aa2.1□□□□□ -2.07
USP46-202ENST00000451218 OBSCNQ5VST9 7968 aa2.1□□□□□ -2.07
USP46-202ENST00000451218 KRTAP6-3Q3LI67 103 aa2.1□□□□□ -2.07
USP46-202ENST00000451218 NEBP20929 6669 aa2.08□□□□□ -2.08
USP46-202ENST00000451218 LCE3DQ9BYE3 92 aa2.04□□□□□ -2.08
USP46-202ENST00000451218 KRTAP20-1Q3LI63 56 aa2.03□□□□□ -2.08
USP46-202ENST00000451218 KRTAP6-1Q3LI64 71 aa2.02□□□□□ -2.09
USP46-202ENST00000451218 KRTAP5-4Q6L8H1 288 aa1.98□□□□□ -2.09
USP46-202ENST00000451218 LCE1EQ5T753 118 aa1.96□□□□□ -2.1
USP46-202ENST00000451218 MT1AP04731 61 aa1.95□□□□□ -2.1
USP46-202ENST00000451218 SYNE1Q8NF91 8797 aaKnown RBP1.94□□□□□ -2.1
USP46-202ENST00000451218 HMCN1Q96RW7 5635 aa1.86□□□□□ -2.11
USP46-202ENST00000451218 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
USP46-202ENST00000451218 KRTAP5-2Q701N4 177 aa1.83□□□□□ -2.12
USP46-202ENST00000451218 GPR98Q8WXG9 6306 aa1.79□□□□□ -2.12
USP46-202ENST00000451218 KRTAP6-2Q3LI66 62 aa1.79□□□□□ -2.12
USP46-202ENST00000451218 KRTAP20-2Q3LI61 65 aa1.77□□□□□ -2.13
USP46-202ENST00000451218 MT4P47944 62 aa1.72□□□□□ -2.13
USP46-202ENST00000451218 LCE1BQ5T7P3 118 aa1.7□□□□□ -2.14
USP46-202ENST00000451218 KRTAP5-11Q6L8G4 156 aa1.67□□□□□ -2.14
USP46-202ENST00000451218 LCE1CQ5T751 118 aa1.65□□□□□ -2.15
USP46-202ENST00000451218 AHNAK2Q8IVF2 5795 aa1.58□□□□□ -2.16
USP46-202ENST00000451218 MUC5ACP98088 5654 aa1.58□□□□□ -2.16
USP46-202ENST00000451218 KRTAP5-1Q6L8H4 278 aa1.57□□□□□ -2.16
USP46-202ENST00000451218 KRTAP5-10Q6L8G5 202 aa1.56□□□□□ -2.16
USP46-202ENST00000451218 KRTAP5-7Q6L8G8 165 aa1.51□□□□□ -2.17
USP46-202ENST00000451218 KRTAP5-8O75690 187 aa1.51□□□□□ -2.17
USP46-202ENST00000451218 PRM1P04553 51 aa1.5□□□□□ -2.17
USP46-202ENST00000451218 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.43□□□□□ -2.18
USP46-202ENST00000451218 KRTAP21-2Q3LI59 83 aa1.38□□□□□ -2.19
USP46-202ENST00000451218 MUC5BQ9HC84 5762 aaPredicted RBP1.32□□□□□ -2.2
USP46-202ENST00000451218 KRTAP4-4Q9BYR3 166 aa1.22□□□□□ -2.21
USP46-202ENST00000451218 AHNAKQ09666 5890 aaKnown RBP1.17□□□□□ -2.22
USP46-202ENST00000451218 PHGR1C9JFL3 82 aa1.12□□□□□ -2.23
USP46-202ENST00000451218 KRTAP21-1Q3LI58 79 aa1.09□□□□□ -2.23
USP46-202ENST00000451218 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 121.9 ms