RNA–Protein interactions for RNA: ENST00000450931.5

PMS1-217, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-217ENST00000450931 LCE3AQ5TA76 89 aa2.18□□□□□ -2.06
PMS1-217ENST00000450931 SPINT4Q6UDR6 99 aa2.18□□□□□ -2.06
PMS1-217ENST00000450931 SMIM20Q8N5G0 67 aa2.18□□□□□ -2.06
PMS1-217ENST00000450931 SPANXA2-OT1Q8N9U9 137 aa2.17□□□□□ -2.06
PMS1-217ENST00000450931 KRTAP12-1P59990 96 aa2.17□□□□□ -2.06
PMS1-217ENST00000450931 SEC61GP60059 68 aa2.15□□□□□ -2.06
PMS1-217ENST00000450931 TNP1P09430 55 aa2.15□□□□□ -2.07
PMS1-217ENST00000450931 SERP1Q9Y6X1 66 aa2.15□□□□□ -2.07
PMS1-217ENST00000450931 SPATA8Q6RVD6 105 aa2.13□□□□□ -2.07
PMS1-217ENST00000450931 A0A1B0GU33 70 aa2.12□□□□□ -2.07
PMS1-217ENST00000450931 J3QR89 54 aa2.11□□□□□ -2.07
PMS1-217ENST00000450931 KRTAP12-3P60328 96 aa2.11□□□□□ -2.07
PMS1-217ENST00000450931 SMIM26A0A096LP01 95 aa2.1□□□□□ -2.07
PMS1-217ENST00000450931 MUC5ACP98088 5654 aa2.1□□□□□ -2.07
PMS1-217ENST00000450931 SYNE1Q8NF91 8797 aaKnown RBP2.09□□□□□ -2.07
PMS1-217ENST00000450931 KRTAP5-2Q701N4 177 aa2.08□□□□□ -2.08
PMS1-217ENST00000450931 COA5Q86WW8 74 aa2.08□□□□□ -2.08
PMS1-217ENST00000450931 SNURFQ9Y675 71 aa2.08□□□□□ -2.08
PMS1-217ENST00000450931 PCP4L1A6NKN8 68 aa2.07□□□□□ -2.08
PMS1-217ENST00000450931 A8MU10 97 aa2□□□□□ -2.09
PMS1-217ENST00000450931 MT1AP04731 61 aa1.99□□□□□ -2.09
PMS1-217ENST00000450931 A0A1B0GU69 56 aa1.99□□□□□ -2.09
PMS1-217ENST00000450931 SERP2Q8N6R1 65 aa1.99□□□□□ -2.09
PMS1-217ENST00000450931 A0A1B0GV90 55 aa1.98□□□□□ -2.09
PMS1-217ENST00000450931 KRTAP15-1Q3LI76 137 aa1.96□□□□□ -2.1
PMS1-217ENST00000450931 KRTAP6-1Q3LI64 71 aa1.95□□□□□ -2.1
PMS1-217ENST00000450931 KRTAP25-1Q3LHN0 102 aa1.94□□□□□ -2.1
PMS1-217ENST00000450931 LCE3CQ5T5A8 94 aa1.92□□□□□ -2.1
PMS1-217ENST00000450931 K7ERU9 68 aa1.91□□□□□ -2.1
PMS1-217ENST00000450931 KRTAP6-2Q3LI66 62 aa1.91□□□□□ -2.1
PMS1-217ENST00000450931 PRR15LQ9BU68 103 aa1.91□□□□□ -2.1
PMS1-217ENST00000450931 KRTAP23-1A1A580 65 aa1.89□□□□□ -2.11
PMS1-217ENST00000450931 KRTAP5-1Q6L8H4 278 aa1.88□□□□□ -2.11
PMS1-217ENST00000450931 H7BZZ5 65 aa1.87□□□□□ -2.11
PMS1-217ENST00000450931 COX7CP15954 63 aa1.86□□□□□ -2.11
PMS1-217ENST00000450931 MT3P25713 68 aa1.83□□□□□ -2.12
PMS1-217ENST00000450931 OBSCNQ5VST9 7968 aa1.82□□□□□ -2.12
PMS1-217ENST00000450931 UQCR11O14957 56 aa1.81□□□□□ -2.12
PMS1-217ENST00000450931 LINC01558Q9Y6Z2 57 aa1.81□□□□□ -2.12
PMS1-217ENST00000450931 KRTAP5-11Q6L8G4 156 aa1.79□□□□□ -2.12
PMS1-217ENST00000450931 KRTAP4-4Q9BYR3 166 aa1.79□□□□□ -2.12
PMS1-217ENST00000450931 KRTAP9-6A8MVA2 160 aa1.79□□□□□ -2.12
PMS1-217ENST00000450931 K7ERS5 55 aa1.77□□□□□ -2.13
PMS1-217ENST00000450931 LCE1EQ5T753 118 aa1.76□□□□□ -2.13
PMS1-217ENST00000450931 ATP5EP56381 51 aaPredicted RBP1.76□□□□□ -2.13
PMS1-217ENST00000450931 MIR22HGQ0VDD5 57 aa1.73□□□□□ -2.13
PMS1-217ENST00000450931 RPS28P62857 69 aaKnown RBP1.69□□□□□ -2.14
PMS1-217ENST00000450931 ANAPC13Q9BS18 74 aa1.64□□□□□ -2.15
PMS1-217ENST00000450931 CDC42SE1Q9NRR8 79 aa1.63□□□□□ -2.15
PMS1-217ENST00000450931 LCE1CQ5T751 118 aa1.62□□□□□ -2.15
PMS1-217ENST00000450931 LCE1BQ5T7P3 118 aa1.62□□□□□ -2.15
PMS1-217ENST00000450931 Q1T7F1 81 aa1.61□□□□□ -2.15
PMS1-217ENST00000450931 CCDC179H3BU77 68 aa1.59□□□□□ -2.15
PMS1-217ENST00000450931 ROMO1P60602 79 aa1.59□□□□□ -2.16
PMS1-217ENST00000450931 TMEM258P61165 79 aa1.58□□□□□ -2.16
PMS1-217ENST00000450931 V9GYY9 64 aa1.58□□□□□ -2.16
PMS1-217ENST00000450931 LCE1FQ5T754 118 aa1.53□□□□□ -2.16
PMS1-217ENST00000450931 PSPHP1O15172 72 aa1.52□□□□□ -2.17
PMS1-217ENST00000450931 A6NED7 52 aa1.49□□□□□ -2.17
PMS1-217ENST00000450931 PHGR1C9JFL3 82 aa1.44□□□□□ -2.18
PMS1-217ENST00000450931 LCE3DQ9BYE3 92 aa1.34□□□□□ -2.2
PMS1-217ENST00000450931 KRTAP21-2Q3LI59 83 aa1.3□□□□□ -2.2
PMS1-217ENST00000450931 LCE3EQ5T5B0 92 aa1.23□□□□□ -2.21
PMS1-217ENST00000450931 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
PMS1-217ENST00000450931 MUC19Q7Z5P9 8384 aa1.15□□□□□ -2.23
PMS1-217ENST00000450931 BRK1Q8WUW1 75 aa1.05□□□□□ -2.24
PMS1-217ENST00000450931 A0A0A0MQY5 61 aa0.98□□□□□ -2.25
PMS1-217ENST00000450931 NDUFAF8A1L188 74 aa0.92□□□□□ -2.26
PMS1-217ENST00000450931 PMAIP1Q13794 54 aa0.91□□□□□ -2.26
PMS1-217ENST00000450931 PRAC1Q96KF2 57 aa0.91□□□□□ -2.26
PMS1-217ENST00000450931 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
PMS1-217ENST00000450931 PCP4P48539 62 aa0.87□□□□□ -2.27
PMS1-217ENST00000450931 LUZP6Q538Z0 58 aa0.87□□□□□ -2.27
PMS1-217ENST00000450931 PRM1P04553 51 aa0.77□□□□□ -2.29
PMS1-217ENST00000450931 KTN1-AS1Q86SY8 53 aa0.68□□□□□ -2.3
PMS1-217ENST00000450931 SVIPQ8NHG7 77 aa0.67□□□□□ -2.3
PMS1-217ENST00000450931 PRO0628Q9UI54 55 aa0.62□□□□□ -2.31
PMS1-217ENST00000450931 INE1O15225 51 aa0.31□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 72.2 ms