RNA–Protein interactions for RNA: ENST00000450056.6

CHFR-205, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 3,250 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-205ENST00000450056 LOC100996750A0A140TA64 210 aa4.71□□□□□ -1.66
CHFR-205ENST00000450056 SYNE1Q8NF91 8797 aaKnown RBP4.7□□□□□ -1.66
CHFR-205ENST00000450056 FCGBPQ9Y6R7 5405 aaPredicted RBP4.7□□□□□ -1.66
CHFR-205ENST00000450056 KRTAP19-6Q3LI70 58 aa4.68□□□□□ -1.66
CHFR-205ENST00000450056 KRTAP12-4P60329 112 aa4.66□□□□□ -1.66
CHFR-205ENST00000450056 MT1LQ93083 61 aa4.66□□□□□ -1.66
CHFR-205ENST00000450056 KRTAP4-3Q9BYR4 195 aa4.66□□□□□ -1.66
CHFR-205ENST00000450056 OBSCNQ5VST9 7968 aa4.65□□□□□ -1.66
CHFR-205ENST00000450056 MT1GP13640 62 aa4.63□□□□□ -1.67
CHFR-205ENST00000450056 MT1EP04732 61 aa4.59□□□□□ -1.68
CHFR-205ENST00000450056 LCE3BQ5TA77 95 aa4.45□□□□□ -1.7
CHFR-205ENST00000450056 KRTAP4-9Q9BYQ8 210 aa4.44□□□□□ -1.7
CHFR-205ENST00000450056 KRTAP9-2Q9BYQ4 174 aa4.36□□□□□ -1.71
CHFR-205ENST00000450056 SYNE2Q8WXH0 6885 aaKnown RBP4.36□□□□□ -1.71
CHFR-205ENST00000450056 KRTAP19-4Q3LI73 84 aa4.31□□□□□ -1.72
CHFR-205ENST00000450056 MT1MQ8N339 61 aa4.29□□□□□ -1.72
CHFR-205ENST00000450056 MACF1Q9UPN3 7388 aaKnown RBP4.27□□□□□ -1.73
CHFR-205ENST00000450056 KRTAP19-3Q7Z4W3 81 aa4.24□□□□□ -1.73
CHFR-205ENST00000450056 MDN1Q9NU22 5596 aa4.23□□□□□ -1.73
CHFR-205ENST00000450056 KRTAP9-7A8MTY7 169 aa4.18□□□□□ -1.74
CHFR-205ENST00000450056 PRM1P04553 51 aa4.18□□□□□ -1.74
CHFR-205ENST00000450056 SPRR2FQ96RM1 72 aa4.18□□□□□ -1.74
CHFR-205ENST00000450056 LCE3DQ9BYE3 92 aa4.15□□□□□ -1.75
CHFR-205ENST00000450056 LCE5AQ5TCM9 118 aa4.1□□□□□ -1.75
CHFR-205ENST00000450056 LCE3EQ5T5B0 92 aa4.09□□□□□ -1.75
CHFR-205ENST00000450056 KRTAP5-9P26371 169 aa4.08□□□□□ -1.76
CHFR-205ENST00000450056 KRTAP6-1Q3LI64 71 aa4.04□□□□□ -1.76
CHFR-205ENST00000450056 LCE1AQ5T7P2 110 aa3.97□□□□□ -1.77
CHFR-205ENST00000450056 KRTAP5-5Q701N2 237 aaPredicted RBP3.93□□□□□ -1.78
CHFR-205ENST00000450056 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.92□□□□□ -1.78
CHFR-205ENST00000450056 KRTAP9-6A0A140TA67 174 aa3.92□□□□□ -1.78
CHFR-205ENST00000450056 MT1AP04731 61 aa3.9□□□□□ -1.78
CHFR-205ENST00000450056 KRTAP6-3Q3LI67 103 aa3.88□□□□□ -1.79
CHFR-205ENST00000450056 KRTAP6-2Q3LI66 62 aa3.87□□□□□ -1.79
CHFR-205ENST00000450056 SPRR2EP22531 72 aa3.86□□□□□ -1.79
CHFR-205ENST00000450056 SPRR2BP35325 72 aa3.86□□□□□ -1.79
CHFR-205ENST00000450056 SPRR2AP35326 72 aa3.86□□□□□ -1.79
CHFR-205ENST00000450056 KRTAP2-2Q9BYT5 123 aa3.8□□□□□ -1.8
CHFR-205ENST00000450056 KRTAP9-4Q9BYQ2 154 aa3.75□□□□□ -1.81
CHFR-205ENST00000450056 SPRR2DP22532 72 aa3.71□□□□□ -1.82
CHFR-205ENST00000450056 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
CHFR-205ENST00000450056 LCE4AQ5TA78 99 aa3.61□□□□□ -1.83
CHFR-205ENST00000450056 KRTAP9-9Q9BYP9 154 aa3.59□□□□□ -1.83
CHFR-205ENST00000450056 NEBP20929 6669 aa3.58□□□□□ -1.84
CHFR-205ENST00000450056 MT3P25713 68 aa3.52□□□□□ -1.85
CHFR-205ENST00000450056 KRTAP5-4Q6L8H1 288 aa3.47□□□□□ -1.85
CHFR-205ENST00000450056 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
CHFR-205ENST00000450056 KRTAP4-6Q9BYQ5 205 aa3.28□□□□□ -1.88
CHFR-205ENST00000450056 MT4P47944 62 aa3.25□□□□□ -1.89
CHFR-205ENST00000450056 LCE1DQ5T752 114 aa3.24□□□□□ -1.89
CHFR-205ENST00000450056 KRTAP20-2Q3LI61 65 aa3.22□□□□□ -1.89
CHFR-205ENST00000450056 MUC19Q7Z5P9 8384 aa3.21□□□□□ -1.9
CHFR-205ENST00000450056 KRTAP4-11Q9BYQ6 195 aa3.2□□□□□ -1.9
CHFR-205ENST00000450056 KRTAP20-1Q3LI63 56 aa3.2□□□□□ -1.9
CHFR-205ENST00000450056 KRTAP5-2Q701N4 177 aa3.19□□□□□ -1.9
CHFR-205ENST00000450056 HMCN1Q96RW7 5635 aa3.15□□□□□ -1.9
CHFR-205ENST00000450056 LCE1BQ5T7P3 118 aa3.13□□□□□ -1.91
CHFR-205ENST00000450056 KRTAP5-3Q6L8H2 238 aa3.12□□□□□ -1.91
CHFR-205ENST00000450056 MUC5ACP98088 5654 aa3.08□□□□□ -1.92
CHFR-205ENST00000450056 KRTAP4-12Q9BQ66 201 aa2.9□□□□□ -1.95
CHFR-205ENST00000450056 KRTAP5-10Q6L8G5 202 aa2.83□□□□□ -1.96
CHFR-205ENST00000450056 GPR98Q8WXG9 6306 aa2.77□□□□□ -1.97
CHFR-205ENST00000450056 KRTAP5-1Q6L8H4 278 aa2.74□□□□□ -1.97
CHFR-205ENST00000450056 AHNAK2Q8IVF2 5795 aa2.69□□□□□ -1.98
CHFR-205ENST00000450056 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
CHFR-205ENST00000450056 KRTAP4-2Q9BYR5 136 aa2.67□□□□□ -1.98
CHFR-205ENST00000450056 KRTAP5-8O75690 187 aa2.65□□□□□ -1.99
CHFR-205ENST00000450056 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
CHFR-205ENST00000450056 KRTAP5-7Q6L8G8 165 aa2.61□□□□□ -1.99
CHFR-205ENST00000450056 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
CHFR-205ENST00000450056 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.51□□□□□ -2.01
CHFR-205ENST00000450056 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
CHFR-205ENST00000450056 KRTAP21-1Q3LI58 79 aa2.4□□□□□ -2.03
CHFR-205ENST00000450056 KRTAP5-11Q6L8G4 156 aa2.32□□□□□ -2.04
CHFR-205ENST00000450056 AHNAKQ09666 5890 aaKnown RBP2.1□□□□□ -2.07
CHFR-205ENST00000450056 PHGR1C9JFL3 82 aa2□□□□□ -2.09
CHFR-205ENST00000450056 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 10.4 ms