RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 MT4P47944 62 aa7.67□□□□□ -1.18
CPSF7-208ENST00000450000 LINC01558Q9Y6Z2 57 aa7.65□□□□□ -1.18
CPSF7-208ENST00000450000 KRTAP4-3Q9BYR4 195 aa7.59□□□□□ -1.19
CPSF7-208ENST00000450000 UQCR11O14957 56 aa7.58□□□□□ -1.2
CPSF7-208ENST00000450000 KRTAP12-3P60328 96 aa7.52□□□□□ -1.21
CPSF7-208ENST00000450000 TMEM258P61165 79 aa7.49□□□□□ -1.21
CPSF7-208ENST00000450000 HMCN1Q96RW7 5635 aa7.48□□□□□ -1.21
CPSF7-208ENST00000450000 KRTAP5-4Q6L8H1 288 aa7.44□□□□□ -1.22
CPSF7-208ENST00000450000 K7ERS5 55 aa7.4□□□□□ -1.22
CPSF7-208ENST00000450000 MIR22HGQ0VDD5 57 aa7.38□□□□□ -1.23
CPSF7-208ENST00000450000 KRTAP4-7Q9BYR0 210 aa7.38□□□□□ -1.23
CPSF7-208ENST00000450000 KRTAP4-6Q9BYQ5 205 aa7.36□□□□□ -1.23
CPSF7-208ENST00000450000 KRTAP25-1Q3LHN0 102 aa7.35□□□□□ -1.23
CPSF7-208ENST00000450000 AHNAK2Q8IVF2 5795 aa7.25□□□□□ -1.25
CPSF7-208ENST00000450000 V9GYY9 64 aa7.2□□□□□ -1.26
CPSF7-208ENST00000450000 KRTAP5-10Q6L8G5 202 aa7.17□□□□□ -1.26
CPSF7-208ENST00000450000 PSPHP1O15172 72 aa7.15□□□□□ -1.26
CPSF7-208ENST00000450000 KRTAP12-4P60329 112 aa7.11□□□□□ -1.27
CPSF7-208ENST00000450000 KRTAP19-4Q3LI73 84 aa7.1□□□□□ -1.27
CPSF7-208ENST00000450000 KRTAP20-2Q3LI61 65 aa7.08□□□□□ -1.28
CPSF7-208ENST00000450000 KRTAP5-5Q701N2 237 aaPredicted RBP7.08□□□□□ -1.28
CPSF7-208ENST00000450000 SPRR5A0A1B0GTR4 108 aa7.05□□□□□ -1.28
CPSF7-208ENST00000450000 Q1T7F1 81 aa7.03□□□□□ -1.28
CPSF7-208ENST00000450000 KRTAP23-1A1A580 65 aa7.02□□□□□ -1.29
CPSF7-208ENST00000450000 KRTAP5-3Q6L8H2 238 aa7.02□□□□□ -1.29
CPSF7-208ENST00000450000 LOC100996750A0A140TA64 210 aa7.01□□□□□ -1.29
CPSF7-208ENST00000450000 KRTAP15-1Q3LI76 137 aa6.99□□□□□ -1.29
CPSF7-208ENST00000450000 A6NED7 52 aa6.95□□□□□ -1.3
CPSF7-208ENST00000450000 KRTAP5-7Q6L8G8 165 aa6.93□□□□□ -1.3
CPSF7-208ENST00000450000 CDC42SE1Q9NRR8 79 aa6.9□□□□□ -1.3
CPSF7-208ENST00000450000 LCE3CQ5T5A8 94 aa6.89□□□□□ -1.31
CPSF7-208ENST00000450000 SYNE1Q8NF91 8797 aaKnown RBP6.87□□□□□ -1.31
CPSF7-208ENST00000450000 RPS28P62857 69 aaKnown RBP6.77□□□□□ -1.33
CPSF7-208ENST00000450000 ROMO1P60602 79 aa6.75□□□□□ -1.33
CPSF7-208ENST00000450000 MT1AP04731 61 aa6.64□□□□□ -1.35
CPSF7-208ENST00000450000 KRTAP6-1Q3LI64 71 aa6.58□□□□□ -1.36
CPSF7-208ENST00000450000 KRTAP4-11Q9BYQ6 195 aa6.51□□□□□ -1.37
CPSF7-208ENST00000450000 KRTAP5-2Q701N4 177 aa6.48□□□□□ -1.37
CPSF7-208ENST00000450000 KRTAP9-4Q9BYQ2 154 aa6.44□□□□□ -1.38
CPSF7-208ENST00000450000 KRTAP9-6A8MVA2 160 aa6.39□□□□□ -1.39
CPSF7-208ENST00000450000 KRTAP6-2Q3LI66 62 aa6.34□□□□□ -1.39
CPSF7-208ENST00000450000 PCP4P48539 62 aa6.26□□□□□ -1.41
CPSF7-208ENST00000450000 KRTAP5-8O75690 187 aa6.25□□□□□ -1.41
CPSF7-208ENST00000450000 OBSCNQ5VST9 7968 aa6.15□□□□□ -1.42
CPSF7-208ENST00000450000 MT3P25713 68 aa6.13□□□□□ -1.43
CPSF7-208ENST00000450000 KRTAP9-9Q9BYP9 154 aa6.07□□□□□ -1.44
CPSF7-208ENST00000450000 AHNAKQ09666 5890 aaKnown RBP6.02□□□□□ -1.45
CPSF7-208ENST00000450000 MUC5BQ9HC84 5762 aaPredicted RBP5.98□□□□□ -1.45
CPSF7-208ENST00000450000 MUC5ACP98088 5654 aa5.98□□□□□ -1.45
CPSF7-208ENST00000450000 KRTAP5-1Q6L8H4 278 aa5.84□□□□□ -1.47
CPSF7-208ENST00000450000 BRK1Q8WUW1 75 aa5.78□□□□□ -1.48
CPSF7-208ENST00000450000 LCE1EQ5T753 118 aa5.61□□□□□ -1.51
CPSF7-208ENST00000450000 PMAIP1Q13794 54 aa5.42□□□□□ -1.54
CPSF7-208ENST00000450000 LCE1BQ5T7P3 118 aa5.37□□□□□ -1.55
CPSF7-208ENST00000450000 KRTAP4-2Q9BYR5 136 aa5.25□□□□□ -1.57
CPSF7-208ENST00000450000 PRAC1Q96KF2 57 aa5.21□□□□□ -1.58
CPSF7-208ENST00000450000 LCE1CQ5T751 118 aa5.19□□□□□ -1.58
CPSF7-208ENST00000450000 LCE3DQ9BYE3 92 aa4.98□□□□□ -1.61
CPSF7-208ENST00000450000 KRTAP4-12Q9BQ66 201 aa4.88□□□□□ -1.63
CPSF7-208ENST00000450000 PRO0628Q9UI54 55 aa4.77□□□□□ -1.65
CPSF7-208ENST00000450000 KRTAP5-11Q6L8G4 156 aa4.7□□□□□ -1.66
CPSF7-208ENST00000450000 LCE3EQ5T5B0 92 aa4.67□□□□□ -1.66
CPSF7-208ENST00000450000 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.67□□□□□ -1.66
CPSF7-208ENST00000450000 KTN1-AS1Q86SY8 53 aa4.65□□□□□ -1.67
CPSF7-208ENST00000450000 LCE1FQ5T754 118 aa4.64□□□□□ -1.67
CPSF7-208ENST00000450000 SVIPQ8NHG7 77 aa4.62□□□□□ -1.67
CPSF7-208ENST00000450000 LUZP6Q538Z0 58 aa4.6□□□□□ -1.67
CPSF7-208ENST00000450000 KRTAP21-2Q3LI59 83 aa4.3□□□□□ -1.72
CPSF7-208ENST00000450000 PHGR1C9JFL3 82 aa4.26□□□□□ -1.73
CPSF7-208ENST00000450000 KRTAP4-4Q9BYR3 166 aa4.02□□□□□ -1.77
CPSF7-208ENST00000450000 MUC19Q7Z5P9 8384 aa3.81□□□□□ -1.8
CPSF7-208ENST00000450000 H3BS24 57 aa3.75□□□□□ -1.81
CPSF7-208ENST00000450000 PRM1P04553 51 aa3.43□□□□□ -1.86
CPSF7-208ENST00000450000 NDUFAF8A1L188 74 aa3.37□□□□□ -1.87
CPSF7-208ENST00000450000 KRTAP21-1Q3LI58 79 aa3.24□□□□□ -1.89
CPSF7-208ENST00000450000 A0A0A0MQY5 61 aa3.11□□□□□ -1.91
CPSF7-208ENST00000450000 INE1O15225 51 aa2.68□□□□□ -1.98
CPSF7-208ENST00000450000 MUC16Q8WXI7 14507 aa2.66□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 12.2 ms