RNA–Protein interactions for RNA: ENST00000449901.6

PKM-204, Transcript of pyruvate kinase M1/2, humanhuman

TSL 2 BASIC

Gene PKM, Length 2,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-204ENST00000449901 MT1LQ93083 61 aa7.99□□□□□ -1.13
PKM-204ENST00000449901 MT1EP04732 61 aa7.91□□□□□ -1.14
PKM-204ENST00000449901 KRTAP19-4Q3LI73 84 aa7.9□□□□□ -1.14
PKM-204ENST00000449901 CRCT1Q9UGL9 99 aa7.85□□□□□ -1.15
PKM-204ENST00000449901 MACF1Q9UPN3 7388 aaKnown RBP7.72□□□□□ -1.17
PKM-204ENST00000449901 LOC100996750A0A140TA64 210 aa7.71□□□□□ -1.18
PKM-204ENST00000449901 MUC12Q9UKN1 5478 aa7.67□□□□□ -1.18
PKM-204ENST00000449901 KRTAP4-3Q9BYR4 195 aa7.63□□□□□ -1.19
PKM-204ENST00000449901 SPRR2FQ96RM1 72 aa7.56□□□□□ -1.2
PKM-204ENST00000449901 MT1GP13640 62 aa7.55□□□□□ -1.2
PKM-204ENST00000449901 KRTAP12-4P60329 112 aa7.51□□□□□ -1.21
PKM-204ENST00000449901 SYNE2Q8WXH0 6885 aaKnown RBP7.5□□□□□ -1.21
PKM-204ENST00000449901 KRTAP19-3Q7Z4W3 81 aa7.48□□□□□ -1.21
PKM-204ENST00000449901 MT1MQ8N339 61 aa7.38□□□□□ -1.23
PKM-204ENST00000449901 KRTAP5-9P26371 169 aa7.37□□□□□ -1.23
PKM-204ENST00000449901 KRTAP9-6A0A140TA67 174 aa7.36□□□□□ -1.23
PKM-204ENST00000449901 LCE5AQ5TCM9 118 aa7.34□□□□□ -1.23
PKM-204ENST00000449901 MDN1Q9NU22 5596 aa7.34□□□□□ -1.23
PKM-204ENST00000449901 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.27□□□□□ -1.25
PKM-204ENST00000449901 LCE1AQ5T7P2 110 aa7.21□□□□□ -1.26
PKM-204ENST00000449901 DSTQ03001 7570 aaKnown RBP7.13□□□□□ -1.27
PKM-204ENST00000449901 KRTAP6-3Q3LI67 103 aa7.11□□□□□ -1.27
PKM-204ENST00000449901 KRTAP4-9Q9BYQ8 210 aa7.1□□□□□ -1.27
PKM-204ENST00000449901 SPRR2EP22531 72 aa7.1□□□□□ -1.27
PKM-204ENST00000449901 SPRR2BP35325 72 aa7.1□□□□□ -1.27
PKM-204ENST00000449901 SPRR2AP35326 72 aa7.1□□□□□ -1.27
PKM-204ENST00000449901 LCE3BQ5TA77 95 aa7.1□□□□□ -1.27
PKM-204ENST00000449901 SYNE1Q8NF91 8797 aaKnown RBP7.01□□□□□ -1.29
PKM-204ENST00000449901 MT1AP04731 61 aa6.91□□□□□ -1.3
PKM-204ENST00000449901 KRTAP6-1Q3LI64 71 aa6.83□□□□□ -1.32
PKM-204ENST00000449901 SPRR2DP22532 72 aa6.82□□□□□ -1.32
PKM-204ENST00000449901 KRTAP9-7A8MTY7 169 aa6.79□□□□□ -1.32
PKM-204ENST00000449901 LCE3DQ9BYE3 92 aa6.79□□□□□ -1.32
PKM-204ENST00000449901 KRTAP5-5Q701N2 237 aaPredicted RBP6.78□□□□□ -1.32
PKM-204ENST00000449901 LCE3EQ5T5B0 92 aa6.74□□□□□ -1.33
PKM-204ENST00000449901 PRM1P04553 51 aa6.72□□□□□ -1.33
PKM-204ENST00000449901 NEBP20929 6669 aa6.62□□□□□ -1.35
PKM-204ENST00000449901 KRTAP6-2Q3LI66 62 aa6.38□□□□□ -1.39
PKM-204ENST00000449901 KRTAP9-4Q9BYQ2 154 aa6.24□□□□□ -1.41
PKM-204ENST00000449901 KRTAP5-4Q6L8H1 288 aa6.21□□□□□ -1.42
PKM-204ENST00000449901 OBSCNQ5VST9 7968 aa6.12□□□□□ -1.43
PKM-204ENST00000449901 KRTAP2-2Q9BYT5 123 aa6.05□□□□□ -1.44
PKM-204ENST00000449901 KRTAP20-1Q3LI63 56 aa6□□□□□ -1.45
PKM-204ENST00000449901 MT4P47944 62 aa5.98□□□□□ -1.45
PKM-204ENST00000449901 KRTAP4-6Q9BYQ5 205 aa5.98□□□□□ -1.45
PKM-204ENST00000449901 LCE4AQ5TA78 99 aa5.98□□□□□ -1.45
PKM-204ENST00000449901 MT3P25713 68 aa5.93□□□□□ -1.46
PKM-204ENST00000449901 KRTAP20-2Q3LI61 65 aa5.82□□□□□ -1.48
PKM-204ENST00000449901 LCE1DQ5T752 114 aa5.82□□□□□ -1.48
PKM-204ENST00000449901 HMCN1Q96RW7 5635 aa5.82□□□□□ -1.48
PKM-204ENST00000449901 KRTAP5-2Q701N4 177 aa5.67□□□□□ -1.5
PKM-204ENST00000449901 KRTAP5-3Q6L8H2 238 aa5.6□□□□□ -1.51
PKM-204ENST00000449901 MUC5ACP98088 5654 aa5.25□□□□□ -1.57
PKM-204ENST00000449901 LCE1EQ5T753 118 aa5.24□□□□□ -1.57
PKM-204ENST00000449901 KRTAP4-11Q9BYQ6 195 aa5.05□□□□□ -1.6
PKM-204ENST00000449901 AHNAK2Q8IVF2 5795 aa5.02□□□□□ -1.61
PKM-204ENST00000449901 KRTAP5-10Q6L8G5 202 aa4.93□□□□□ -1.62
PKM-204ENST00000449901 KRTAP5-1Q6L8H4 278 aa4.91□□□□□ -1.62
PKM-204ENST00000449901 LCE1BQ5T7P3 118 aa4.82□□□□□ -1.64
PKM-204ENST00000449901 KRTAP5-8O75690 187 aa4.81□□□□□ -1.64
PKM-204ENST00000449901 KRTAP4-2Q9BYR5 136 aa4.77□□□□□ -1.65
PKM-204ENST00000449901 LCE1CQ5T751 118 aa4.72□□□□□ -1.65
PKM-204ENST00000449901 KRTAP5-7Q6L8G8 165 aa4.64□□□□□ -1.67
PKM-204ENST00000449901 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.41□□□□□ -1.7
PKM-204ENST00000449901 KRTAP21-2Q3LI59 83 aa4.38□□□□□ -1.71
PKM-204ENST00000449901 GPR98Q8WXG9 6306 aa4.32□□□□□ -1.72
PKM-204ENST00000449901 KRTAP21-1Q3LI58 79 aa4.26□□□□□ -1.73
PKM-204ENST00000449901 KRTAP9-9Q9BYP9 154 aa4.23□□□□□ -1.73
PKM-204ENST00000449901 MUC5BQ9HC84 5762 aaPredicted RBP4.22□□□□□ -1.73
PKM-204ENST00000449901 LCE1FQ5T754 118 aa4.22□□□□□ -1.73
PKM-204ENST00000449901 KRTAP5-11Q6L8G4 156 aa4.14□□□□□ -1.75
PKM-204ENST00000449901 MUC19Q7Z5P9 8384 aa4.11□□□□□ -1.75
PKM-204ENST00000449901 KRTAP4-4Q9BYR3 166 aa4.09□□□□□ -1.76
PKM-204ENST00000449901 KRTAP4-12Q9BQ66 201 aa3.97□□□□□ -1.77
PKM-204ENST00000449901 AHNAKQ09666 5890 aaKnown RBP3.62□□□□□ -1.83
PKM-204ENST00000449901 PHGR1C9JFL3 82 aa3.57□□□□□ -1.84
PKM-204ENST00000449901 MUC16Q8WXI7 14507 aa2.37□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 47.1 ms