RNA–Protein interactions for RNA: ENST00000449415.5

RFTN1-205, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 3

Gene RFTN1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-205ENST00000449415 PP632Q6XCG6 107 aa6.39□□□□□ -1.39
RFTN1-205ENST00000449415 Q1T7F1 81 aa6.38□□□□□ -1.39
RFTN1-205ENST00000449415 MT1MQ8N339 61 aa6.36□□□□□ -1.39
RFTN1-205ENST00000449415 K7ERS5 55 aa6.32□□□□□ -1.4
RFTN1-205ENST00000449415 KRTAP12-3P60328 96 aa6.26□□□□□ -1.41
RFTN1-205ENST00000449415 KRTAP4-3Q9BYR4 195 aa6.26□□□□□ -1.41
RFTN1-205ENST00000449415 KRTAP25-1Q3LHN0 102 aa6.24□□□□□ -1.41
RFTN1-205ENST00000449415 KRTAP4-9Q9BYQ8 210 aa6.23□□□□□ -1.41
RFTN1-205ENST00000449415 A6NED7 52 aa6.21□□□□□ -1.42
RFTN1-205ENST00000449415 PCP4P48539 62 aa6.16□□□□□ -1.42
RFTN1-205ENST00000449415 KRTAP4-7Q9BYR0 210 aa6.15□□□□□ -1.42
RFTN1-205ENST00000449415 RPS28P62857 69 aaKnown RBP6.1□□□□□ -1.43
RFTN1-205ENST00000449415 LCE1DQ5T752 114 aa6.06□□□□□ -1.44
RFTN1-205ENST00000449415 LCE4AQ5TA78 99 aa6.06□□□□□ -1.44
RFTN1-205ENST00000449415 MT4P47944 62 aa6.05□□□□□ -1.44
RFTN1-205ENST00000449415 CDC42SE1Q9NRR8 79 aa6□□□□□ -1.45
RFTN1-205ENST00000449415 KRTAP23-1A1A580 65 aa5.96□□□□□ -1.46
RFTN1-205ENST00000449415 KRTAP5-4Q6L8H1 288 aa5.96□□□□□ -1.46
RFTN1-205ENST00000449415 ROMO1P60602 79 aa5.92□□□□□ -1.46
RFTN1-205ENST00000449415 KRTAP15-1Q3LI76 137 aa5.89□□□□□ -1.47
RFTN1-205ENST00000449415 KRTAP4-6Q9BYQ5 205 aa5.87□□□□□ -1.47
RFTN1-205ENST00000449415 HMCN1Q96RW7 5635 aa5.86□□□□□ -1.47
RFTN1-205ENST00000449415 GPR98Q8WXG9 6306 aa5.84□□□□□ -1.47
RFTN1-205ENST00000449415 LOC100996750A0A140TA64 210 aa5.82□□□□□ -1.48
RFTN1-205ENST00000449415 KRTAP19-4Q3LI73 84 aa5.81□□□□□ -1.48
RFTN1-205ENST00000449415 KRTAP5-5Q701N2 237 aaPredicted RBP5.78□□□□□ -1.48
RFTN1-205ENST00000449415 LCE3CQ5T5A8 94 aa5.77□□□□□ -1.49
RFTN1-205ENST00000449415 KRTAP20-2Q3LI61 65 aa5.64□□□□□ -1.51
RFTN1-205ENST00000449415 AHNAK2Q8IVF2 5795 aa5.63□□□□□ -1.51
RFTN1-205ENST00000449415 KRTAP12-4P60329 112 aa5.62□□□□□ -1.51
RFTN1-205ENST00000449415 SPRR5A0A1B0GTR4 108 aa5.59□□□□□ -1.51
RFTN1-205ENST00000449415 KRTAP5-10Q6L8G5 202 aa5.55□□□□□ -1.52
RFTN1-205ENST00000449415 SYNE1Q8NF91 8797 aaKnown RBP5.54□□□□□ -1.52
RFTN1-205ENST00000449415 KRTAP5-3Q6L8H2 238 aa5.47□□□□□ -1.53
RFTN1-205ENST00000449415 KRTAP9-6A8MVA2 160 aa5.46□□□□□ -1.54
RFTN1-205ENST00000449415 MT1AP04731 61 aa5.44□□□□□ -1.54
RFTN1-205ENST00000449415 BRK1Q8WUW1 75 aa5.44□□□□□ -1.54
RFTN1-205ENST00000449415 KRTAP6-1Q3LI64 71 aa5.43□□□□□ -1.54
RFTN1-205ENST00000449415 KRTAP5-7Q6L8G8 165 aa5.3□□□□□ -1.56
RFTN1-205ENST00000449415 KRTAP9-4Q9BYQ2 154 aa5.25□□□□□ -1.57
RFTN1-205ENST00000449415 KRTAP5-2Q701N4 177 aa5.24□□□□□ -1.57
RFTN1-205ENST00000449415 KRTAP6-2Q3LI66 62 aa5.16□□□□□ -1.58
RFTN1-205ENST00000449415 KRTAP4-11Q9BYQ6 195 aa5.12□□□□□ -1.59
RFTN1-205ENST00000449415 PMAIP1Q13794 54 aa5.1□□□□□ -1.59
RFTN1-205ENST00000449415 MT3P25713 68 aa4.97□□□□□ -1.61
RFTN1-205ENST00000449415 KRTAP5-8O75690 187 aa4.95□□□□□ -1.62
RFTN1-205ENST00000449415 SVIPQ8NHG7 77 aa4.95□□□□□ -1.62
RFTN1-205ENST00000449415 PRAC1Q96KF2 57 aa4.95□□□□□ -1.62
RFTN1-205ENST00000449415 OBSCNQ5VST9 7968 aa4.88□□□□□ -1.63
RFTN1-205ENST00000449415 PRO0628Q9UI54 55 aa4.74□□□□□ -1.65
RFTN1-205ENST00000449415 KRTAP5-1Q6L8H4 278 aa4.68□□□□□ -1.66
RFTN1-205ENST00000449415 KRTAP9-9Q9BYP9 154 aa4.68□□□□□ -1.66
RFTN1-205ENST00000449415 MUC5BQ9HC84 5762 aaPredicted RBP4.59□□□□□ -1.67
RFTN1-205ENST00000449415 MUC5ACP98088 5654 aa4.57□□□□□ -1.68
RFTN1-205ENST00000449415 AHNAKQ09666 5890 aaKnown RBP4.56□□□□□ -1.68
RFTN1-205ENST00000449415 KTN1-AS1Q86SY8 53 aa4.54□□□□□ -1.68
RFTN1-205ENST00000449415 LCE1EQ5T753 118 aa4.5□□□□□ -1.69
RFTN1-205ENST00000449415 LCE1BQ5T7P3 118 aa4.32□□□□□ -1.72
RFTN1-205ENST00000449415 KRTAP4-2Q9BYR5 136 aa4.27□□□□□ -1.73
RFTN1-205ENST00000449415 KRTAP4-12Q9BQ66 201 aa4.2□□□□□ -1.74
RFTN1-205ENST00000449415 LCE1CQ5T751 118 aa4.18□□□□□ -1.74
RFTN1-205ENST00000449415 LCE3DQ9BYE3 92 aa4.18□□□□□ -1.74
RFTN1-205ENST00000449415 LUZP6Q538Z0 58 aa4.12□□□□□ -1.75
RFTN1-205ENST00000449415 LCE3EQ5T5B0 92 aa3.95□□□□□ -1.78
RFTN1-205ENST00000449415 H3BS24 57 aa3.83□□□□□ -1.8
RFTN1-205ENST00000449415 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.8□□□□□ -1.8
RFTN1-205ENST00000449415 KRTAP5-11Q6L8G4 156 aa3.78□□□□□ -1.8
RFTN1-205ENST00000449415 LCE1FQ5T754 118 aa3.63□□□□□ -1.83
RFTN1-205ENST00000449415 KRTAP21-2Q3LI59 83 aa3.55□□□□□ -1.84
RFTN1-205ENST00000449415 NDUFAF8A1L188 74 aa3.38□□□□□ -1.87
RFTN1-205ENST00000449415 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
RFTN1-205ENST00000449415 PHGR1C9JFL3 82 aa3.27□□□□□ -1.89
RFTN1-205ENST00000449415 PRM1P04553 51 aa3.06□□□□□ -1.92
RFTN1-205ENST00000449415 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
RFTN1-205ENST00000449415 A0A0A0MQY5 61 aa2.95□□□□□ -1.94
RFTN1-205ENST00000449415 INE1O15225 51 aa2.66□□□□□ -1.98
RFTN1-205ENST00000449415 KRTAP21-1Q3LI58 79 aa2.43□□□□□ -2.02
RFTN1-205ENST00000449415 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 53.5 ms