RNA–Protein interactions for RNA: ENST00000449389.1

SRRT-205, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-205ENST00000449389 KRTAP4-3Q9BYR4 195 aa3.74□□□□□ -1.81
SRRT-205ENST00000449389 AHNAK2Q8IVF2 5795 aa3.74□□□□□ -1.81
SRRT-205ENST00000449389 KRTAP5-4Q6L8H1 288 aa3.73□□□□□ -1.81
SRRT-205ENST00000449389 ATP5EP56381 51 aaPredicted RBP3.7□□□□□ -1.82
SRRT-205ENST00000449389 CCDC179H3BU77 68 aa3.67□□□□□ -1.82
SRRT-205ENST00000449389 LINC01558Q9Y6Z2 57 aa3.67□□□□□ -1.82
SRRT-205ENST00000449389 KRTAP12-3P60328 96 aa3.66□□□□□ -1.82
SRRT-205ENST00000449389 KRTAP4-6Q9BYQ5 205 aa3.65□□□□□ -1.83
SRRT-205ENST00000449389 KRTAP4-7Q9BYR0 210 aa3.63□□□□□ -1.83
SRRT-205ENST00000449389 UQCR11O14957 56 aa3.61□□□□□ -1.83
SRRT-205ENST00000449389 KRTAP5-10Q6L8G5 202 aa3.61□□□□□ -1.83
SRRT-205ENST00000449389 KRTAP25-1Q3LHN0 102 aa3.56□□□□□ -1.84
SRRT-205ENST00000449389 TMEM258P61165 79 aa3.55□□□□□ -1.84
SRRT-205ENST00000449389 KRTAP5-5Q701N2 237 aaPredicted RBP3.53□□□□□ -1.84
SRRT-205ENST00000449389 KRTAP20-2Q3LI61 65 aa3.52□□□□□ -1.85
SRRT-205ENST00000449389 SPRR5A0A1B0GTR4 108 aa3.51□□□□□ -1.85
SRRT-205ENST00000449389 MIR22HGQ0VDD5 57 aa3.51□□□□□ -1.85
SRRT-205ENST00000449389 KRTAP5-3Q6L8H2 238 aa3.51□□□□□ -1.85
SRRT-205ENST00000449389 K7ERS5 55 aa3.49□□□□□ -1.85
SRRT-205ENST00000449389 KRTAP19-4Q3LI73 84 aa3.49□□□□□ -1.85
SRRT-205ENST00000449389 KRTAP5-7Q6L8G8 165 aa3.49□□□□□ -1.85
SRRT-205ENST00000449389 KRTAP12-4P60329 112 aa3.48□□□□□ -1.85
SRRT-205ENST00000449389 LOC100996750A0A140TA64 210 aa3.44□□□□□ -1.86
SRRT-205ENST00000449389 SYNE1Q8NF91 8797 aaKnown RBP3.43□□□□□ -1.86
SRRT-205ENST00000449389 KRTAP23-1A1A580 65 aa3.42□□□□□ -1.86
SRRT-205ENST00000449389 V9GYY9 64 aa3.4□□□□□ -1.87
SRRT-205ENST00000449389 KRTAP15-1Q3LI76 137 aa3.39□□□□□ -1.87
SRRT-205ENST00000449389 PSPHP1O15172 72 aa3.38□□□□□ -1.87
SRRT-205ENST00000449389 LCE3CQ5T5A8 94 aa3.36□□□□□ -1.87
SRRT-205ENST00000449389 Q1T7F1 81 aa3.35□□□□□ -1.87
SRRT-205ENST00000449389 PCP4P48539 62 aa3.33□□□□□ -1.88
SRRT-205ENST00000449389 MT1AP04731 61 aa3.28□□□□□ -1.88
SRRT-205ENST00000449389 CDC42SE1Q9NRR8 79 aa3.28□□□□□ -1.88
SRRT-205ENST00000449389 A6NED7 52 aa3.27□□□□□ -1.89
SRRT-205ENST00000449389 KRTAP6-1Q3LI64 71 aa3.25□□□□□ -1.89
SRRT-205ENST00000449389 KRTAP5-2Q701N4 177 aa3.25□□□□□ -1.89
SRRT-205ENST00000449389 KRTAP4-11Q9BYQ6 195 aa3.24□□□□□ -1.89
SRRT-205ENST00000449389 ROMO1P60602 79 aa3.22□□□□□ -1.89
SRRT-205ENST00000449389 RPS28P62857 69 aaKnown RBP3.22□□□□□ -1.89
SRRT-205ENST00000449389 KRTAP9-4Q9BYQ2 154 aa3.17□□□□□ -1.9
SRRT-205ENST00000449389 KRTAP9-6A8MVA2 160 aa3.16□□□□□ -1.9
SRRT-205ENST00000449389 AHNAKQ09666 5890 aaKnown RBP3.14□□□□□ -1.91
SRRT-205ENST00000449389 KRTAP5-8O75690 187 aa3.13□□□□□ -1.91
SRRT-205ENST00000449389 KRTAP6-2Q3LI66 62 aa3.12□□□□□ -1.91
SRRT-205ENST00000449389 MUC5BQ9HC84 5762 aaPredicted RBP3.11□□□□□ -1.91
SRRT-205ENST00000449389 MUC5ACP98088 5654 aa3.09□□□□□ -1.91
SRRT-205ENST00000449389 OBSCNQ5VST9 7968 aa3.03□□□□□ -1.92
SRRT-205ENST00000449389 MT3P25713 68 aa3□□□□□ -1.93
SRRT-205ENST00000449389 KRTAP9-9Q9BYP9 154 aa2.99□□□□□ -1.93
SRRT-205ENST00000449389 KRTAP5-1Q6L8H4 278 aa2.92□□□□□ -1.94
SRRT-205ENST00000449389 SVIPQ8NHG7 77 aa2.84□□□□□ -1.95
SRRT-205ENST00000449389 BRK1Q8WUW1 75 aa2.82□□□□□ -1.96
SRRT-205ENST00000449389 LCE1EQ5T753 118 aa2.78□□□□□ -1.96
SRRT-205ENST00000449389 PMAIP1Q13794 54 aa2.67□□□□□ -1.98
SRRT-205ENST00000449389 KRTAP4-2Q9BYR5 136 aa2.62□□□□□ -1.99
SRRT-205ENST00000449389 LCE1BQ5T7P3 118 aa2.61□□□□□ -1.99
SRRT-205ENST00000449389 PRO0628Q9UI54 55 aa2.61□□□□□ -1.99
SRRT-205ENST00000449389 LCE1CQ5T751 118 aa2.58□□□□□ -2
SRRT-205ENST00000449389 KRTAP4-12Q9BQ66 201 aa2.55□□□□□ -2
SRRT-205ENST00000449389 PRAC1Q96KF2 57 aa2.52□□□□□ -2.01
SRRT-205ENST00000449389 H3BS24 57 aa2.5□□□□□ -2.01
SRRT-205ENST00000449389 KTN1-AS1Q86SY8 53 aa2.45□□□□□ -2.02
SRRT-205ENST00000449389 LCE3DQ9BYE3 92 aa2.41□□□□□ -2.02
SRRT-205ENST00000449389 KRTAP5-11Q6L8G4 156 aa2.35□□□□□ -2.03
SRRT-205ENST00000449389 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.34□□□□□ -2.03
SRRT-205ENST00000449389 LCE1FQ5T754 118 aa2.31□□□□□ -2.04
SRRT-205ENST00000449389 LCE3EQ5T5B0 92 aa2.25□□□□□ -2.05
SRRT-205ENST00000449389 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
SRRT-205ENST00000449389 A0A0A0MQY5 61 aa2.13□□□□□ -2.07
SRRT-205ENST00000449389 PHGR1C9JFL3 82 aa2.11□□□□□ -2.07
SRRT-205ENST00000449389 LUZP6Q538Z0 58 aa2.11□□□□□ -2.07
SRRT-205ENST00000449389 KRTAP4-4Q9BYR3 166 aa1.96□□□□□ -2.1
SRRT-205ENST00000449389 NDUFAF8A1L188 74 aa1.88□□□□□ -2.11
SRRT-205ENST00000449389 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
SRRT-205ENST00000449389 PRM1P04553 51 aa1.63□□□□□ -2.15
SRRT-205ENST00000449389 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
SRRT-205ENST00000449389 INE1O15225 51 aa1.52□□□□□ -2.17
SRRT-205ENST00000449389 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 169 ms