RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 KRTAP4-3Q9BYR4 195 aa4.89□□□□□ -1.63
RTFDC1-204ENST00000449062 MIR22HGQ0VDD5 57 aa4.87□□□□□ -1.63
RTFDC1-204ENST00000449062 KRTAP12-3P60328 96 aa4.85□□□□□ -1.63
RTFDC1-204ENST00000449062 Q1T7F1 81 aa4.83□□□□□ -1.64
RTFDC1-204ENST00000449062 GPR98Q8WXG9 6306 aa4.83□□□□□ -1.64
RTFDC1-204ENST00000449062 PSPHP1O15172 72 aa4.8□□□□□ -1.64
RTFDC1-204ENST00000449062 LCE4AQ5TA78 99 aa4.8□□□□□ -1.64
RTFDC1-204ENST00000449062 HMCN1Q96RW7 5635 aa4.79□□□□□ -1.64
RTFDC1-204ENST00000449062 KRTAP25-1Q3LHN0 102 aa4.79□□□□□ -1.64
RTFDC1-204ENST00000449062 LCE1DQ5T752 114 aa4.79□□□□□ -1.64
RTFDC1-204ENST00000449062 KRTAP4-7Q9BYR0 210 aa4.79□□□□□ -1.64
RTFDC1-204ENST00000449062 V9GYY9 64 aa4.79□□□□□ -1.64
RTFDC1-204ENST00000449062 KRTAP5-4Q6L8H1 288 aa4.78□□□□□ -1.64
RTFDC1-204ENST00000449062 K7ERS5 55 aa4.7□□□□□ -1.66
RTFDC1-204ENST00000449062 MT4P47944 62 aa4.7□□□□□ -1.66
RTFDC1-204ENST00000449062 KRTAP23-1A1A580 65 aa4.66□□□□□ -1.66
RTFDC1-204ENST00000449062 KRTAP4-6Q9BYQ5 205 aa4.65□□□□□ -1.67
RTFDC1-204ENST00000449062 RPS28P62857 69 aaKnown RBP4.62□□□□□ -1.67
RTFDC1-204ENST00000449062 KRTAP19-4Q3LI73 84 aa4.61□□□□□ -1.67
RTFDC1-204ENST00000449062 KRTAP5-5Q701N2 237 aaPredicted RBP4.61□□□□□ -1.67
RTFDC1-204ENST00000449062 AHNAK2Q8IVF2 5795 aa4.61□□□□□ -1.67
RTFDC1-204ENST00000449062 A6NED7 52 aa4.6□□□□□ -1.67
RTFDC1-204ENST00000449062 KRTAP15-1Q3LI76 137 aa4.55□□□□□ -1.68
RTFDC1-204ENST00000449062 LOC100996750A0A140TA64 210 aa4.53□□□□□ -1.68
RTFDC1-204ENST00000449062 PCP4P48539 62 aa4.5□□□□□ -1.69
RTFDC1-204ENST00000449062 LCE3CQ5T5A8 94 aa4.49□□□□□ -1.69
RTFDC1-204ENST00000449062 CDC42SE1Q9NRR8 79 aa4.49□□□□□ -1.69
RTFDC1-204ENST00000449062 KRTAP20-2Q3LI61 65 aa4.47□□□□□ -1.69
RTFDC1-204ENST00000449062 SYNE1Q8NF91 8797 aaKnown RBP4.47□□□□□ -1.69
RTFDC1-204ENST00000449062 SPRR5A0A1B0GTR4 108 aa4.46□□□□□ -1.7
RTFDC1-204ENST00000449062 ROMO1P60602 79 aa4.46□□□□□ -1.7
RTFDC1-204ENST00000449062 KRTAP5-10Q6L8G5 202 aa4.46□□□□□ -1.7
RTFDC1-204ENST00000449062 KRTAP12-4P60329 112 aa4.4□□□□□ -1.71
RTFDC1-204ENST00000449062 H3BS24 57 aa4.38□□□□□ -1.71
RTFDC1-204ENST00000449062 KRTAP5-3Q6L8H2 238 aa4.38□□□□□ -1.71
RTFDC1-204ENST00000449062 KRTAP9-6A8MVA2 160 aa4.29□□□□□ -1.72
RTFDC1-204ENST00000449062 KRTAP5-7Q6L8G8 165 aa4.28□□□□□ -1.72
RTFDC1-204ENST00000449062 MT1AP04731 61 aa4.27□□□□□ -1.73
RTFDC1-204ENST00000449062 KRTAP6-1Q3LI64 71 aa4.25□□□□□ -1.73
RTFDC1-204ENST00000449062 KRTAP5-2Q701N4 177 aa4.19□□□□□ -1.74
RTFDC1-204ENST00000449062 KRTAP9-4Q9BYQ2 154 aa4.13□□□□□ -1.75
RTFDC1-204ENST00000449062 KRTAP4-11Q9BYQ6 195 aa4.08□□□□□ -1.76
RTFDC1-204ENST00000449062 KRTAP6-2Q3LI66 62 aa4.04□□□□□ -1.76
RTFDC1-204ENST00000449062 BRK1Q8WUW1 75 aa3.98□□□□□ -1.77
RTFDC1-204ENST00000449062 KRTAP4-12Q9BQ66 201 aa3.98□□□□□ -1.77
RTFDC1-204ENST00000449062 KRTAP5-8O75690 187 aa3.96□□□□□ -1.78
RTFDC1-204ENST00000449062 OBSCNQ5VST9 7968 aa3.92□□□□□ -1.78
RTFDC1-204ENST00000449062 MT3P25713 68 aa3.89□□□□□ -1.79
RTFDC1-204ENST00000449062 KRTAP9-9Q9BYP9 154 aa3.86□□□□□ -1.79
RTFDC1-204ENST00000449062 AHNAKQ09666 5890 aaKnown RBP3.84□□□□□ -1.79
RTFDC1-204ENST00000449062 MUC5BQ9HC84 5762 aaPredicted RBP3.82□□□□□ -1.8
RTFDC1-204ENST00000449062 MUC5ACP98088 5654 aa3.79□□□□□ -1.8
RTFDC1-204ENST00000449062 KRTAP5-1Q6L8H4 278 aa3.75□□□□□ -1.81
RTFDC1-204ENST00000449062 PMAIP1Q13794 54 aa3.73□□□□□ -1.81
RTFDC1-204ENST00000449062 SVIPQ8NHG7 77 aa3.67□□□□□ -1.82
RTFDC1-204ENST00000449062 PRAC1Q96KF2 57 aa3.62□□□□□ -1.83
RTFDC1-204ENST00000449062 LCE1EQ5T753 118 aa3.6□□□□□ -1.83
RTFDC1-204ENST00000449062 KRTAP4-2Q9BYR5 136 aa3.49□□□□□ -1.85
RTFDC1-204ENST00000449062 PRO0628Q9UI54 55 aa3.47□□□□□ -1.85
RTFDC1-204ENST00000449062 LCE1CQ5T751 118 aa3.34□□□□□ -1.87
RTFDC1-204ENST00000449062 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.87
RTFDC1-204ENST00000449062 KTN1-AS1Q86SY8 53 aa3.33□□□□□ -1.88
RTFDC1-204ENST00000449062 LCE3DQ9BYE3 92 aa3.22□□□□□ -1.89
RTFDC1-204ENST00000449062 A0A0A0MQY5 61 aa3.16□□□□□ -1.9
RTFDC1-204ENST00000449062 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.06□□□□□ -1.92
RTFDC1-204ENST00000449062 LCE3EQ5T5B0 92 aa3.04□□□□□ -1.92
RTFDC1-204ENST00000449062 LUZP6Q538Z0 58 aa3.03□□□□□ -1.92
RTFDC1-204ENST00000449062 KRTAP5-11Q6L8G4 156 aa3.01□□□□□ -1.93
RTFDC1-204ENST00000449062 LCE1FQ5T754 118 aa2.92□□□□□ -1.94
RTFDC1-204ENST00000449062 KRTAP21-2Q3LI59 83 aa2.83□□□□□ -1.96
RTFDC1-204ENST00000449062 PHGR1C9JFL3 82 aa2.61□□□□□ -1.99
RTFDC1-204ENST00000449062 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
RTFDC1-204ENST00000449062 NDUFAF8A1L188 74 aa2.5□□□□□ -2.01
RTFDC1-204ENST00000449062 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
RTFDC1-204ENST00000449062 PRM1P04553 51 aa2.27□□□□□ -2.05
RTFDC1-204ENST00000449062 INE1O15225 51 aa1.96□□□□□ -2.1
RTFDC1-204ENST00000449062 KRTAP21-1Q3LI58 79 aa1.94□□□□□ -2.1
RTFDC1-204ENST00000449062 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 9.9 ms