RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 LCE4AQ5TA78 99 aa6.87□□□□□ -1.31
VCP-203ENST00000448530 UQCR11O14957 56 aa6.83□□□□□ -1.32
VCP-203ENST00000448530 MT4P47944 62 aa6.81□□□□□ -1.32
VCP-203ENST00000448530 TMEM258P61165 79 aa6.81□□□□□ -1.32
VCP-203ENST00000448530 KRTAP4-3Q9BYR4 195 aa6.81□□□□□ -1.32
VCP-203ENST00000448530 KRTAP12-3P60328 96 aa6.76□□□□□ -1.33
VCP-203ENST00000448530 HMCN1Q96RW7 5635 aa6.75□□□□□ -1.33
VCP-203ENST00000448530 KRTAP5-4Q6L8H1 288 aa6.69□□□□□ -1.34
VCP-203ENST00000448530 MIR22HGQ0VDD5 57 aa6.66□□□□□ -1.34
VCP-203ENST00000448530 KRTAP4-7Q9BYR0 210 aa6.63□□□□□ -1.35
VCP-203ENST00000448530 K7ERS5 55 aa6.62□□□□□ -1.35
VCP-203ENST00000448530 KRTAP25-1Q3LHN0 102 aa6.62□□□□□ -1.35
VCP-203ENST00000448530 KRTAP4-6Q9BYQ5 205 aa6.57□□□□□ -1.36
VCP-203ENST00000448530 AHNAK2Q8IVF2 5795 aa6.53□□□□□ -1.36
VCP-203ENST00000448530 V9GYY9 64 aa6.51□□□□□ -1.37
VCP-203ENST00000448530 PSPHP1O15172 72 aa6.48□□□□□ -1.37
VCP-203ENST00000448530 Q1T7F1 81 aa6.4□□□□□ -1.38
VCP-203ENST00000448530 KRTAP5-10Q6L8G5 202 aa6.4□□□□□ -1.38
VCP-203ENST00000448530 KRTAP19-4Q3LI73 84 aa6.38□□□□□ -1.39
VCP-203ENST00000448530 KRTAP5-5Q701N2 237 aaPredicted RBP6.38□□□□□ -1.39
VCP-203ENST00000448530 KRTAP23-1A1A580 65 aa6.34□□□□□ -1.39
VCP-203ENST00000448530 KRTAP20-2Q3LI61 65 aa6.34□□□□□ -1.39
VCP-203ENST00000448530 KRTAP12-4P60329 112 aa6.33□□□□□ -1.4
VCP-203ENST00000448530 SPRR5A0A1B0GTR4 108 aa6.31□□□□□ -1.4
VCP-203ENST00000448530 LOC100996750A0A140TA64 210 aa6.29□□□□□ -1.4
VCP-203ENST00000448530 KRTAP15-1Q3LI76 137 aa6.29□□□□□ -1.4
VCP-203ENST00000448530 A6NED7 52 aa6.28□□□□□ -1.4
VCP-203ENST00000448530 KRTAP5-3Q6L8H2 238 aa6.26□□□□□ -1.41
VCP-203ENST00000448530 LCE3CQ5T5A8 94 aa6.21□□□□□ -1.42
VCP-203ENST00000448530 CDC42SE1Q9NRR8 79 aa6.21□□□□□ -1.42
VCP-203ENST00000448530 KRTAP5-7Q6L8G8 165 aa6.18□□□□□ -1.42
VCP-203ENST00000448530 SYNE1Q8NF91 8797 aaKnown RBP6.1□□□□□ -1.43
VCP-203ENST00000448530 ROMO1P60602 79 aa6.09□□□□□ -1.43
VCP-203ENST00000448530 RPS28P62857 69 aaKnown RBP6.06□□□□□ -1.44
VCP-203ENST00000448530 MT1AP04731 61 aa5.96□□□□□ -1.46
VCP-203ENST00000448530 KRTAP6-1Q3LI64 71 aa5.91□□□□□ -1.46
VCP-203ENST00000448530 KRTAP5-2Q701N4 177 aa5.84□□□□□ -1.47
VCP-203ENST00000448530 KRTAP4-11Q9BYQ6 195 aa5.81□□□□□ -1.48
VCP-203ENST00000448530 KRTAP9-6A8MVA2 160 aa5.8□□□□□ -1.48
VCP-203ENST00000448530 KRTAP9-4Q9BYQ2 154 aa5.77□□□□□ -1.49
VCP-203ENST00000448530 PCP4P48539 62 aa5.75□□□□□ -1.49
VCP-203ENST00000448530 KRTAP6-2Q3LI66 62 aa5.68□□□□□ -1.5
VCP-203ENST00000448530 KRTAP5-8O75690 187 aa5.59□□□□□ -1.51
VCP-203ENST00000448530 OBSCNQ5VST9 7968 aa5.53□□□□□ -1.52
VCP-203ENST00000448530 MT3P25713 68 aa5.48□□□□□ -1.53
VCP-203ENST00000448530 AHNAKQ09666 5890 aaKnown RBP5.41□□□□□ -1.54
VCP-203ENST00000448530 MUC5ACP98088 5654 aa5.4□□□□□ -1.54
VCP-203ENST00000448530 KRTAP9-9Q9BYP9 154 aa5.38□□□□□ -1.55
VCP-203ENST00000448530 MUC5BQ9HC84 5762 aaPredicted RBP5.36□□□□□ -1.55
VCP-203ENST00000448530 BRK1Q8WUW1 75 aa5.26□□□□□ -1.57
VCP-203ENST00000448530 KRTAP5-1Q6L8H4 278 aa5.25□□□□□ -1.57
VCP-203ENST00000448530 LCE1EQ5T753 118 aa5.03□□□□□ -1.6
VCP-203ENST00000448530 PMAIP1Q13794 54 aa4.93□□□□□ -1.62
VCP-203ENST00000448530 LCE1BQ5T7P3 118 aa4.78□□□□□ -1.64
VCP-203ENST00000448530 PRAC1Q96KF2 57 aa4.75□□□□□ -1.65
VCP-203ENST00000448530 KRTAP4-2Q9BYR5 136 aa4.73□□□□□ -1.65
VCP-203ENST00000448530 LCE1CQ5T751 118 aa4.66□□□□□ -1.66
VCP-203ENST00000448530 LCE3DQ9BYE3 92 aa4.48□□□□□ -1.69
VCP-203ENST00000448530 PRO0628Q9UI54 55 aa4.4□□□□□ -1.71
VCP-203ENST00000448530 KRTAP4-12Q9BQ66 201 aa4.34□□□□□ -1.71
VCP-203ENST00000448530 KTN1-AS1Q86SY8 53 aa4.26□□□□□ -1.73
VCP-203ENST00000448530 KRTAP5-11Q6L8G4 156 aa4.23□□□□□ -1.73
VCP-203ENST00000448530 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.22□□□□□ -1.73
VCP-203ENST00000448530 LCE3EQ5T5B0 92 aa4.2□□□□□ -1.74
VCP-203ENST00000448530 SVIPQ8NHG7 77 aa4.19□□□□□ -1.74
VCP-203ENST00000448530 LCE1FQ5T754 118 aa4.15□□□□□ -1.75
VCP-203ENST00000448530 LUZP6Q538Z0 58 aa4.13□□□□□ -1.75
VCP-203ENST00000448530 KRTAP21-2Q3LI59 83 aa3.88□□□□□ -1.79
VCP-203ENST00000448530 PHGR1C9JFL3 82 aa3.77□□□□□ -1.81
VCP-203ENST00000448530 KRTAP4-4Q9BYR3 166 aa3.59□□□□□ -1.83
VCP-203ENST00000448530 H3BS24 57 aa3.49□□□□□ -1.85
VCP-203ENST00000448530 MUC19Q7Z5P9 8384 aa3.39□□□□□ -1.87
VCP-203ENST00000448530 PRM1P04553 51 aa3.09□□□□□ -1.91
VCP-203ENST00000448530 NDUFAF8A1L188 74 aa3.08□□□□□ -1.92
VCP-203ENST00000448530 KRTAP21-1Q3LI58 79 aa2.87□□□□□ -1.95
VCP-203ENST00000448530 A0A0A0MQY5 61 aa2.46□□□□□ -2.02
VCP-203ENST00000448530 INE1O15225 51 aa2.46□□□□□ -2.02
VCP-203ENST00000448530 MUC16Q8WXI7 14507 aa2.42□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 7.6 ms