RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 LCE1DQ5T752 114 aa6.17□□□□□ -1.42
DDX56-207ENST00000448192 KRTAP4-3Q9BYR4 195 aa6.16□□□□□ -1.42
DDX56-207ENST00000448192 LCE4AQ5TA78 99 aa6.14□□□□□ -1.43
DDX56-207ENST00000448192 MT4P47944 62 aa6.13□□□□□ -1.43
DDX56-207ENST00000448192 PCP4P48539 62 aa6.12□□□□□ -1.43
DDX56-207ENST00000448192 UQCR11O14957 56 aa6.11□□□□□ -1.43
DDX56-207ENST00000448192 TMEM258P61165 79 aa6.11□□□□□ -1.43
DDX56-207ENST00000448192 HMCN1Q96RW7 5635 aa6.1□□□□□ -1.43
DDX56-207ENST00000448192 KRTAP12-3P60328 96 aa6.06□□□□□ -1.44
DDX56-207ENST00000448192 KRTAP5-4Q6L8H1 288 aa6□□□□□ -1.45
DDX56-207ENST00000448192 KRTAP4-7Q9BYR0 210 aa6□□□□□ -1.45
DDX56-207ENST00000448192 MIR22HGQ0VDD5 57 aa5.97□□□□□ -1.45
DDX56-207ENST00000448192 KRTAP4-6Q9BYQ5 205 aa5.93□□□□□ -1.46
DDX56-207ENST00000448192 AHNAK2Q8IVF2 5795 aa5.93□□□□□ -1.46
DDX56-207ENST00000448192 KRTAP25-1Q3LHN0 102 aa5.92□□□□□ -1.46
DDX56-207ENST00000448192 K7ERS5 55 aa5.89□□□□□ -1.47
DDX56-207ENST00000448192 H3BS24 57 aa5.84□□□□□ -1.47
DDX56-207ENST00000448192 PSPHP1O15172 72 aa5.84□□□□□ -1.47
DDX56-207ENST00000448192 V9GYY9 64 aa5.81□□□□□ -1.48
DDX56-207ENST00000448192 Q1T7F1 81 aa5.76□□□□□ -1.49
DDX56-207ENST00000448192 KRTAP5-10Q6L8G5 202 aa5.74□□□□□ -1.49
DDX56-207ENST00000448192 KRTAP5-5Q701N2 237 aaPredicted RBP5.74□□□□□ -1.49
DDX56-207ENST00000448192 LOC100996750A0A140TA64 210 aa5.69□□□□□ -1.5
DDX56-207ENST00000448192 KRTAP20-2Q3LI61 65 aa5.69□□□□□ -1.5
DDX56-207ENST00000448192 KRTAP19-4Q3LI73 84 aa5.67□□□□□ -1.5
DDX56-207ENST00000448192 A0A0A0MQY5 61 aa5.66□□□□□ -1.5
DDX56-207ENST00000448192 KRTAP23-1A1A580 65 aa5.66□□□□□ -1.5
DDX56-207ENST00000448192 KRTAP12-4P60329 112 aa5.65□□□□□ -1.5
DDX56-207ENST00000448192 SPRR5A0A1B0GTR4 108 aa5.64□□□□□ -1.51
DDX56-207ENST00000448192 A6NED7 52 aa5.64□□□□□ -1.51
DDX56-207ENST00000448192 KRTAP15-1Q3LI76 137 aa5.64□□□□□ -1.51
DDX56-207ENST00000448192 KRTAP5-3Q6L8H2 238 aa5.61□□□□□ -1.51
DDX56-207ENST00000448192 SYNE1Q8NF91 8797 aaKnown RBP5.58□□□□□ -1.52
DDX56-207ENST00000448192 LCE3CQ5T5A8 94 aa5.57□□□□□ -1.52
DDX56-207ENST00000448192 CDC42SE1Q9NRR8 79 aa5.56□□□□□ -1.52
DDX56-207ENST00000448192 KRTAP5-7Q6L8G8 165 aa5.52□□□□□ -1.53
DDX56-207ENST00000448192 ROMO1P60602 79 aa5.46□□□□□ -1.54
DDX56-207ENST00000448192 RPS28P62857 69 aaKnown RBP5.41□□□□□ -1.54
DDX56-207ENST00000448192 MT1AP04731 61 aa5.34□□□□□ -1.55
DDX56-207ENST00000448192 KRTAP6-1Q3LI64 71 aa5.33□□□□□ -1.56
DDX56-207ENST00000448192 KRTAP9-6A8MVA2 160 aa5.25□□□□□ -1.57
DDX56-207ENST00000448192 KRTAP5-2Q701N4 177 aa5.25□□□□□ -1.57
DDX56-207ENST00000448192 KRTAP4-11Q9BYQ6 195 aa5.2□□□□□ -1.58
DDX56-207ENST00000448192 KRTAP9-4Q9BYQ2 154 aa5.18□□□□□ -1.58
DDX56-207ENST00000448192 PRO0628Q9UI54 55 aa5.17□□□□□ -1.58
DDX56-207ENST00000448192 KRTAP6-2Q3LI66 62 aa5.12□□□□□ -1.59
DDX56-207ENST00000448192 KRTAP5-8O75690 187 aa5.03□□□□□ -1.6
DDX56-207ENST00000448192 OBSCNQ5VST9 7968 aa5.02□□□□□ -1.61
DDX56-207ENST00000448192 PMAIP1Q13794 54 aa4.94□□□□□ -1.62
DDX56-207ENST00000448192 AHNAKQ09666 5890 aaKnown RBP4.9□□□□□ -1.62
DDX56-207ENST00000448192 MT3P25713 68 aa4.9□□□□□ -1.63
DDX56-207ENST00000448192 MUC5ACP98088 5654 aa4.86□□□□□ -1.63
DDX56-207ENST00000448192 MUC5BQ9HC84 5762 aaPredicted RBP4.85□□□□□ -1.63
DDX56-207ENST00000448192 KRTAP9-9Q9BYP9 154 aa4.8□□□□□ -1.64
DDX56-207ENST00000448192 BRK1Q8WUW1 75 aa4.73□□□□□ -1.65
DDX56-207ENST00000448192 KRTAP5-1Q6L8H4 278 aa4.72□□□□□ -1.65
DDX56-207ENST00000448192 PRAC1Q96KF2 57 aa4.69□□□□□ -1.66
DDX56-207ENST00000448192 KTN1-AS1Q86SY8 53 aa4.6□□□□□ -1.67
DDX56-207ENST00000448192 LCE1EQ5T753 118 aa4.49□□□□□ -1.69
DDX56-207ENST00000448192 LUZP6Q538Z0 58 aa4.34□□□□□ -1.71
DDX56-207ENST00000448192 LCE1BQ5T7P3 118 aa4.29□□□□□ -1.72
DDX56-207ENST00000448192 KRTAP4-2Q9BYR5 136 aa4.26□□□□□ -1.73
DDX56-207ENST00000448192 LCE1CQ5T751 118 aa4.17□□□□□ -1.74
DDX56-207ENST00000448192 NDUFAF8A1L188 74 aa4.07□□□□□ -1.76
DDX56-207ENST00000448192 LCE3DQ9BYE3 92 aa4.01□□□□□ -1.77
DDX56-207ENST00000448192 KRTAP4-12Q9BQ66 201 aa3.93□□□□□ -1.78
DDX56-207ENST00000448192 KRTAP5-11Q6L8G4 156 aa3.78□□□□□ -1.8
DDX56-207ENST00000448192 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.77□□□□□ -1.81
DDX56-207ENST00000448192 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
DDX56-207ENST00000448192 LCE1FQ5T754 118 aa3.69□□□□□ -1.82
DDX56-207ENST00000448192 KRTAP21-2Q3LI59 83 aa3.5□□□□□ -1.85
DDX56-207ENST00000448192 PHGR1C9JFL3 82 aa3.37□□□□□ -1.87
DDX56-207ENST00000448192 INE1O15225 51 aa3.33□□□□□ -1.88
DDX56-207ENST00000448192 KRTAP4-4Q9BYR3 166 aa3.26□□□□□ -1.89
DDX56-207ENST00000448192 MUC19Q7Z5P9 8384 aa3.13□□□□□ -1.91
DDX56-207ENST00000448192 PRM1P04553 51 aa2.8□□□□□ -1.96
DDX56-207ENST00000448192 KRTAP21-1Q3LI58 79 aa2.54□□□□□ -2
DDX56-207ENST00000448192 MUC16Q8WXI7 14507 aa2.17□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 147.6 ms