RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 LOC100996750A0A140TA64 210 aa5.25□□□□□ -1.57
CNOT3-204ENST00000447684 LCE2DQ5TA82 110 aaPredicted RBP5.24□□□□□ -1.57
CNOT3-204ENST00000447684 CRCT1Q9UGL9 99 aa5.21□□□□□ -1.58
CNOT3-204ENST00000447684 KRTAP4-3Q9BYR4 195 aa5.16□□□□□ -1.58
CNOT3-204ENST00000447684 MT1GP13640 62 aa5.14□□□□□ -1.59
CNOT3-204ENST00000447684 DSTQ03001 7570 aaKnown RBP5.01□□□□□ -1.61
CNOT3-204ENST00000447684 FCGBPQ9Y6R7 5405 aaPredicted RBP5□□□□□ -1.61
CNOT3-204ENST00000447684 MUC12Q9UKN1 5478 aa4.99□□□□□ -1.61
CNOT3-204ENST00000447684 SSPOA2VEC9 5147 aa4.97□□□□□ -1.61
CNOT3-204ENST00000447684 KRTAP9-7A8MTY7 169 aa4.94□□□□□ -1.62
CNOT3-204ENST00000447684 FSIP2Q5CZC0 6907 aa4.94□□□□□ -1.62
CNOT3-204ENST00000447684 KRTAP4-9Q9BYQ8 210 aa4.93□□□□□ -1.62
CNOT3-204ENST00000447684 SYNE1Q8NF91 8797 aaKnown RBP4.93□□□□□ -1.62
CNOT3-204ENST00000447684 LCE3BQ5TA77 95 aa4.93□□□□□ -1.62
CNOT3-204ENST00000447684 MT1MQ8N339 61 aa4.88□□□□□ -1.63
CNOT3-204ENST00000447684 KRTAP19-3Q7Z4W3 81 aa4.83□□□□□ -1.64
CNOT3-204ENST00000447684 KRTAP19-6Q3LI70 58 aa4.81□□□□□ -1.64
CNOT3-204ENST00000447684 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.78□□□□□ -1.64
CNOT3-204ENST00000447684 PRM1P04553 51 aa4.73□□□□□ -1.65
CNOT3-204ENST00000447684 LCE3DQ9BYE3 92 aa4.68□□□□□ -1.66
CNOT3-204ENST00000447684 MT1AP04731 61 aa4.65□□□□□ -1.67
CNOT3-204ENST00000447684 LCE3EQ5T5B0 92 aa4.64□□□□□ -1.67
CNOT3-204ENST00000447684 LCE5AQ5TCM9 118 aa4.62□□□□□ -1.67
CNOT3-204ENST00000447684 KRTAP5-5Q701N2 237 aaPredicted RBP4.6□□□□□ -1.67
CNOT3-204ENST00000447684 OBSCNQ5VST9 7968 aa4.58□□□□□ -1.68
CNOT3-204ENST00000447684 KRTAP6-1Q3LI64 71 aa4.58□□□□□ -1.68
CNOT3-204ENST00000447684 SPRR2FQ96RM1 72 aa4.52□□□□□ -1.69
CNOT3-204ENST00000447684 SYNE2Q8WXH0 6885 aaKnown RBP4.49□□□□□ -1.69
CNOT3-204ENST00000447684 KRTAP6-3Q3LI67 103 aa4.46□□□□□ -1.7
CNOT3-204ENST00000447684 KRTAP6-2Q3LI66 62 aa4.41□□□□□ -1.7
CNOT3-204ENST00000447684 MACF1Q9UPN3 7388 aaKnown RBP4.39□□□□□ -1.71
CNOT3-204ENST00000447684 GPR98Q8WXG9 6306 aa4.34□□□□□ -1.71
CNOT3-204ENST00000447684 KRTAP20-1Q3LI63 56 aa4.34□□□□□ -1.71
CNOT3-204ENST00000447684 MDN1Q9NU22 5596 aa4.29□□□□□ -1.72
CNOT3-204ENST00000447684 LCE1AQ5T7P2 110 aa4.25□□□□□ -1.73
CNOT3-204ENST00000447684 KRTAP2-2Q9BYT5 123 aa4.17□□□□□ -1.74
CNOT3-204ENST00000447684 KRTAP9-4Q9BYQ2 154 aa4.15□□□□□ -1.75
CNOT3-204ENST00000447684 NEBP20929 6669 aa4.11□□□□□ -1.75
CNOT3-204ENST00000447684 KRTAP5-9P26371 169 aa4.08□□□□□ -1.76
CNOT3-204ENST00000447684 MT3P25713 68 aa3.97□□□□□ -1.77
CNOT3-204ENST00000447684 SPRR2EP22531 72 aa3.94□□□□□ -1.78
CNOT3-204ENST00000447684 SPRR2BP35325 72 aa3.94□□□□□ -1.78
CNOT3-204ENST00000447684 SPRR2AP35326 72 aa3.94□□□□□ -1.78
CNOT3-204ENST00000447684 LCE1EQ5T753 118 aa3.94□□□□□ -1.78
CNOT3-204ENST00000447684 LCE1DQ5T752 114 aa3.78□□□□□ -1.8
CNOT3-204ENST00000447684 SPRR2DP22532 72 aa3.75□□□□□ -1.81
CNOT3-204ENST00000447684 MUC5BQ9HC84 5762 aaPredicted RBP3.73□□□□□ -1.81
CNOT3-204ENST00000447684 KRTAP5-7Q6L8G8 165 aa3.69□□□□□ -1.82
CNOT3-204ENST00000447684 AHNAKQ09666 5890 aaKnown RBP3.64□□□□□ -1.83
CNOT3-204ENST00000447684 KRTAP4-11Q9BYQ6 195 aa3.57□□□□□ -1.84
CNOT3-204ENST00000447684 KRTAP5-4Q6L8H1 288 aa3.56□□□□□ -1.84
CNOT3-204ENST00000447684 MUC5ACP98088 5654 aa3.52□□□□□ -1.85
CNOT3-204ENST00000447684 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
CNOT3-204ENST00000447684 AHNAK2Q8IVF2 5795 aa3.45□□□□□ -1.86
CNOT3-204ENST00000447684 KRTAP5-10Q6L8G5 202 aa3.44□□□□□ -1.86
CNOT3-204ENST00000447684 KRTAP4-6Q9BYQ5 205 aa3.42□□□□□ -1.86
CNOT3-204ENST00000447684 MT4P47944 62 aa3.41□□□□□ -1.86
CNOT3-204ENST00000447684 KRTAP5-2Q701N4 177 aa3.41□□□□□ -1.86
CNOT3-204ENST00000447684 KRTAP9-9Q9BYP9 154 aa3.36□□□□□ -1.87
CNOT3-204ENST00000447684 KRTAP20-2Q3LI61 65 aa3.34□□□□□ -1.87
CNOT3-204ENST00000447684 LCE4AQ5TA78 99 aa3.33□□□□□ -1.88
CNOT3-204ENST00000447684 LCE1BQ5T7P3 118 aa3.32□□□□□ -1.88
CNOT3-204ENST00000447684 HMCN1Q96RW7 5635 aa3.27□□□□□ -1.89
CNOT3-204ENST00000447684 KRTAP5-1Q6L8H4 278 aa3.19□□□□□ -1.9
CNOT3-204ENST00000447684 MUC19Q7Z5P9 8384 aa3.18□□□□□ -1.9
CNOT3-204ENST00000447684 KRTAP5-3Q6L8H2 238 aa3.16□□□□□ -1.9
CNOT3-204ENST00000447684 KRTAP4-2Q9BYR5 136 aa2.99□□□□□ -1.93
CNOT3-204ENST00000447684 LCE1CQ5T751 118 aa2.98□□□□□ -1.93
CNOT3-204ENST00000447684 KRTAP21-2Q3LI59 83 aa2.9□□□□□ -1.95
CNOT3-204ENST00000447684 KRTAP21-1Q3LI58 79 aa2.89□□□□□ -1.95
CNOT3-204ENST00000447684 KRTAP4-4Q9BYR3 166 aa2.86□□□□□ -1.95
CNOT3-204ENST00000447684 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.85□□□□□ -1.95
CNOT3-204ENST00000447684 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
CNOT3-204ENST00000447684 KRTAP5-11Q6L8G4 156 aa2.52□□□□□ -2.01
CNOT3-204ENST00000447684 KRTAP4-12Q9BQ66 201 aa2.5□□□□□ -2.01
CNOT3-204ENST00000447684 PHGR1C9JFL3 82 aa2.18□□□□□ -2.06
CNOT3-204ENST00000447684 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 58.7 ms