RNA–Protein interactions for RNA: ENST00000447421.5

CHEK2-218, Transcript of checkpoint kinase 2, humanhuman

TSL 5

Gene CHEK2, Length 900 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-218ENST00000447421 CRCT1Q9UGL9 99 aa1.92□□□□□ -2.1
CHEK2-218ENST00000447421 PLAC4Q8WY50 150 aa1.91□□□□□ -2.1
CHEK2-218ENST00000447421 FAT1Q14517 4588 aa1.91□□□□□ -2.1
CHEK2-218ENST00000447421 KRTAP12-4P60329 112 aa1.9□□□□□ -2.11
CHEK2-218ENST00000447421 LRP1Q07954 4544 aaKnown RBP1.87□□□□□ -2.11
CHEK2-218ENST00000447421 M0R2T5 61 aa1.87□□□□□ -2.11
CHEK2-218ENST00000447421 RPS29P62273 56 aaKnown RBP1.86□□□□□ -2.11
CHEK2-218ENST00000447421 KRTAP6-3Q3LI67 103 aa1.86□□□□□ -2.11
CHEK2-218ENST00000447421 HMCN1Q96RW7 5635 aa1.86□□□□□ -2.11
CHEK2-218ENST00000447421 LRP2P98164 4655 aa1.85□□□□□ -2.11
CHEK2-218ENST00000447421 KRTAP12-1P59990 96 aa1.84□□□□□ -2.11
CHEK2-218ENST00000447421 S4R3F8 94 aa1.84□□□□□ -2.11
CHEK2-218ENST00000447421 FAT3Q8TDW7 4589 aa1.84□□□□□ -2.11
CHEK2-218ENST00000447421 A0A0D9SG42 100 aa1.83□□□□□ -2.12
CHEK2-218ENST00000447421 M0QZ58 72 aa1.83□□□□□ -2.12
CHEK2-218ENST00000447421 LPAP08519 4548 aa1.82□□□□□ -2.12
CHEK2-218ENST00000447421 C10orf95Q9H7T3 257 aa1.81□□□□□ -2.12
CHEK2-218ENST00000447421 PKHD1L1Q86WI1 4243 aa1.8□□□□□ -2.12
CHEK2-218ENST00000447421 C9orf92A6NGG3 77 aa1.78□□□□□ -2.12
CHEK2-218ENST00000447421 DNAH8Q96JB1 4490 aa1.76□□□□□ -2.13
CHEK2-218ENST00000447421 TNXBP22105 4242 aa1.76□□□□□ -2.13
CHEK2-218ENST00000447421 KRTAP4-1Q9BYQ7 146 aa1.72□□□□□ -2.13
CHEK2-218ENST00000447421 MT1HP80294 61 aa1.71□□□□□ -2.14
CHEK2-218ENST00000447421 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
CHEK2-218ENST00000447421 SYNE2Q8WXH0 6885 aaKnown RBP1.67□□□□□ -2.14
CHEK2-218ENST00000447421 SSPOA2VEC9 5147 aa1.66□□□□□ -2.14
CHEK2-218ENST00000447421 NEBP20929 6669 aa1.66□□□□□ -2.14
CHEK2-218ENST00000447421 TNP1P09430 55 aa1.65□□□□□ -2.15
CHEK2-218ENST00000447421 KRTAP20-1Q3LI63 56 aa1.64□□□□□ -2.15
CHEK2-218ENST00000447421 GPR98Q8WXG9 6306 aa1.63□□□□□ -2.15
CHEK2-218ENST00000447421 USH2AO75445 5202 aa1.62□□□□□ -2.15
CHEK2-218ENST00000447421 MACF1Q9UPN3 7388 aaKnown RBP1.61□□□□□ -2.15
CHEK2-218ENST00000447421 FCGBPQ9Y6R7 5405 aaPredicted RBP1.6□□□□□ -2.15
CHEK2-218ENST00000447421 MUC17Q685J3 4493 aa1.59□□□□□ -2.15
CHEK2-218ENST00000447421 KRTAP19-2Q3LHN2 52 aa1.59□□□□□ -2.15
CHEK2-218ENST00000447421 MT2AP02795 61 aa1.56□□□□□ -2.16
CHEK2-218ENST00000447421 MT1FP04733 61 aa1.55□□□□□ -2.16
CHEK2-218ENST00000447421 MUC12Q9UKN1 5478 aa1.54□□□□□ -2.16
CHEK2-218ENST00000447421 KMT2DO14686 5537 aa1.52□□□□□ -2.17
CHEK2-218ENST00000447421 KRTAP19-6Q3LI70 58 aa1.48□□□□□ -2.17
CHEK2-218ENST00000447421 FLGP20930 4061 aaPredicted RBP1.45□□□□□ -2.18
CHEK2-218ENST00000447421 SPRR2EP22531 72 aa1.45□□□□□ -2.18
CHEK2-218ENST00000447421 SPRR2BP35325 72 aa1.45□□□□□ -2.18
CHEK2-218ENST00000447421 SPRR2AP35326 72 aa1.45□□□□□ -2.18
CHEK2-218ENST00000447421 SPRR2FQ96RM1 72 aa1.44□□□□□ -2.18
CHEK2-218ENST00000447421 KRTAP2-3P0C7H8 128 aa1.43□□□□□ -2.18
CHEK2-218ENST00000447421 KRTAP2-4Q9BYR9 128 aa1.43□□□□□ -2.18
CHEK2-218ENST00000447421 SPRR2DP22532 72 aa1.41□□□□□ -2.18
CHEK2-218ENST00000447421 MDN1Q9NU22 5596 aa1.4□□□□□ -2.19
CHEK2-218ENST00000447421 KRTAP8-1Q8IUC2 63 aa1.39□□□□□ -2.19
CHEK2-218ENST00000447421 AHNAK2Q8IVF2 5795 aa1.38□□□□□ -2.19
CHEK2-218ENST00000447421 KRTAP2-1Q9BYU5 128 aa1.37□□□□□ -2.19
CHEK2-218ENST00000447421 MT1BP07438 61 aa1.34□□□□□ -2.19
CHEK2-218ENST00000447421 KRTAP5-10Q6L8G5 202 aa1.31□□□□□ -2.2
CHEK2-218ENST00000447421 SPRR2GQ9BYE4 73 aa1.3□□□□□ -2.2
CHEK2-218ENST00000447421 KRTAP19-8Q3LI54 63 aa1.29□□□□□ -2.2
CHEK2-218ENST00000447421 DSTQ03001 7570 aaKnown RBP1.29□□□□□ -2.2
CHEK2-218ENST00000447421 MT4P47944 62 aa1.28□□□□□ -2.2
CHEK2-218ENST00000447421 AHNAKQ09666 5890 aaKnown RBP1.26□□□□□ -2.21
CHEK2-218ENST00000447421 MT1XP80297 61 aa1.24□□□□□ -2.21
CHEK2-218ENST00000447421 MUC5BQ9HC84 5762 aaPredicted RBP1.21□□□□□ -2.22
CHEK2-218ENST00000447421 MUC5ACP98088 5654 aa1.16□□□□□ -2.22
CHEK2-218ENST00000447421 KRTAP19-5Q3LI72 72 aa1.14□□□□□ -2.23
CHEK2-218ENST00000447421 KRTAP19-3Q7Z4W3 81 aa1.14□□□□□ -2.23
CHEK2-218ENST00000447421 MT1EP04732 61 aa1.11□□□□□ -2.23
CHEK2-218ENST00000447421 MT1AP04731 61 aa1.09□□□□□ -2.23
CHEK2-218ENST00000447421 MT1LQ93083 61 aa1.09□□□□□ -2.23
CHEK2-218ENST00000447421 MT1GP13640 62 aa1.08□□□□□ -2.24
CHEK2-218ENST00000447421 KRTAP19-7Q3SYF9 63 aa1.08□□□□□ -2.24
CHEK2-218ENST00000447421 MT1MQ8N339 61 aa1.08□□□□□ -2.24
CHEK2-218ENST00000447421 PRM1P04553 51 aa1.05□□□□□ -2.24
CHEK2-218ENST00000447421 KRTAP20-2Q3LI61 65 aa1.04□□□□□ -2.24
CHEK2-218ENST00000447421 KRTAP6-2Q3LI66 62 aa0.93□□□□□ -2.26
CHEK2-218ENST00000447421 SYNE1Q8NF91 8797 aaKnown RBP0.92□□□□□ -2.26
CHEK2-218ENST00000447421 KRTAP6-1Q3LI64 71 aa0.9□□□□□ -2.27
CHEK2-218ENST00000447421 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
CHEK2-218ENST00000447421 PHGR1C9JFL3 82 aa0.8□□□□□ -2.28
CHEK2-218ENST00000447421 KRTAP21-1Q3LI58 79 aa0.7□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 6 ms