RNA–Protein interactions for RNA: ENST00000447421.5

CHEK2-218, Transcript of checkpoint kinase 2, humanhuman

TSL 5

Gene CHEK2, Length 900 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-218ENST00000447421 AEBP2Q6ZN18 517 aaPredicted RBP22.73■■□□□ 1.23
CHEK2-218ENST00000447421 CHIC1Q5VXU3 224 aa22.32■■□□□ 1.16
CHEK2-218ENST00000447421 PHF23Q9BUL5 403 aaPredicted RBP19.61■□□□□ 0.73
CHEK2-218ENST00000447421 SENP3Q9H4L4 574 aaPredicted RBP19.34■□□□□ 0.69
CHEK2-218ENST00000447421 PLPPR3Q6T4P5 718 aa18.2■□□□□ 0.5
CHEK2-218ENST00000447421 FOXD1Q16676 465 aa17.91■□□□□ 0.46
CHEK2-218ENST00000447421 ADRA2BP18089 450 aa17.3■□□□□ 0.36
CHEK2-218ENST00000447421 PPP6R1Q9UPN7 881 aa17.29■□□□□ 0.36
CHEK2-218ENST00000447421 PIAS4Q8N2W9 510 aaPredicted RBP16.95■□□□□ 0.3
CHEK2-218ENST00000447421 POTEDQ86YR6 584 aa16.77■□□□□ 0.28
CHEK2-218ENST00000447421 MSH5O43196 834 aa16.52■□□□□ 0.24
CHEK2-218ENST00000447421 PPP4R3CPQ6ZMV5 832 aa16.04■□□□□ 0.16
CHEK2-218ENST00000447421 SCAF1Q9H7N4 1312 aaKnown RBP15.9■□□□□ 0.14
CHEK2-218ENST00000447421 KCNA4P22459 653 aa15.75■□□□□ 0.11
CHEK2-218ENST00000447421 NCBP3Q53F19 620 aaKnown RBP15.69■□□□□ 0.1
CHEK2-218ENST00000447421 MAPK8IP2Q13387 824 aaPredicted RBP15.67■□□□□ 0.1
CHEK2-218ENST00000447421 CNKSR2Q8WXI2 1034 aa15.57■□□□□ 0.08
CHEK2-218ENST00000447421 DMRT2Q9Y5R5 561 aa15.43■□□□□ 0.06
CHEK2-218ENST00000447421 NPM3O75607 178 aaKnown RBP15.4■□□□□ 0.06
CHEK2-218ENST00000447421 RNF216Q9NWF9 866 aaPredicted RBP15.24■□□□□ 0.03
CHEK2-218ENST00000447421 HOXD11P31277 338 aaPredicted RBP15.13■□□□□ 0.01
CHEK2-218ENST00000447421 SLC4A1APQ9BWU0 796 aaKnown RBP15.05■□□□□ -0
CHEK2-218ENST00000447421 DNAJC5BQ9UF47 199 aa14.89□□□□□ -0.03
CHEK2-218ENST00000447421 DCAF8L1A6NGE4 600 aa14.85□□□□□ -0.03
CHEK2-218ENST00000447421 EHMT2Q96KQ7 1210 aa14.75□□□□□ -0.05
CHEK2-218ENST00000447421 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.5□□□□□ -0.092e-6■□□□□ 8.5
CHEK2-218ENST00000447421 SLC4A2P04920 1241 aa14.49□□□□□ -0.09
CHEK2-218ENST00000447421 FOXD4L1Q9NU39 408 aa14.49□□□□□ -0.09
CHEK2-218ENST00000447421 CSRNP3Q8WYN3 585 aa14.47□□□□□ -0.09
CHEK2-218ENST00000447421 ZBTB22O15209 634 aa14.46□□□□□ -0.09
CHEK2-218ENST00000447421 MYCNP04198 464 aaPredicted RBP14.25□□□□□ -0.13
CHEK2-218ENST00000447421 U3KPZ7 1027 aaPredicted RBP14.2□□□□□ -0.14
CHEK2-218ENST00000447421 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.13□□□□□ -0.15
CHEK2-218ENST00000447421 HNRNPUL2Q1KMD3 747 aaKnown RBP14.13□□□□□ -0.15
CHEK2-218ENST00000447421 RNF39Q9H2S5 420 aa14.13□□□□□ -0.15
CHEK2-218ENST00000447421 SAMD1Q6SPF0 538 aaPredicted RBP14.07□□□□□ -0.16
CHEK2-218ENST00000447421 C1QBPQ07021 282 aaKnown RBP14□□□□□ -0.17
CHEK2-218ENST00000447421 ATXN8OSP0DMR3 200 aa13.98□□□□□ -0.17
CHEK2-218ENST00000447421 APLP2Q06481 763 aa13.98□□□□□ -0.17
CHEK2-218ENST00000447421 CACNB1Q02641 598 aaPredicted RBP13.85□□□□□ -0.19
CHEK2-218ENST00000447421 ATF5Q9Y2D1 282 aaPredicted RBP13.82□□□□□ -0.2
CHEK2-218ENST00000447421 CAPN15O75808 1086 aa13.79□□□□□ -0.2
CHEK2-218ENST00000447421 SPINK5Q9NQ38 1064 aaPredicted RBP13.79□□□□□ -0.2
CHEK2-218ENST00000447421 TRHP20396 242 aaPredicted RBP13.75□□□□□ -0.21
CHEK2-218ENST00000447421 ZNF219Q9P2Y4 722 aaPredicted RBP13.73□□□□□ -0.21
CHEK2-218ENST00000447421 POLA2Q14181 598 aa13.52□□□□□ -0.25
CHEK2-218ENST00000447421 ABCB7O75027 752 aa13.51□□□□□ -0.25
CHEK2-218ENST00000447421 DSG3P32926 999 aa13.48□□□□□ -0.25
CHEK2-218ENST00000447421 ZBTB12Q9Y330 459 aaPredicted RBP13.33□□□□□ -0.28
CHEK2-218ENST00000447421 FBLN2P98095 1184 aa13.32□□□□□ -0.28
CHEK2-218ENST00000447421 MKRN4PQ13434 485 aaPredicted RBP13.22□□□□□ -0.29
CHEK2-218ENST00000447421 FKBP8Q14318 412 aa13.13□□□□□ -0.31
CHEK2-218ENST00000447421 OSCARQ8IYS5 282 aa13.05□□□□□ -0.32
CHEK2-218ENST00000447421 SPDYE4A6NLX3 237 aa13.03□□□□□ -0.32
CHEK2-218ENST00000447421 SPDYE2BA6NHP3 402 aa12.95□□□□□ -0.34
CHEK2-218ENST00000447421 SPDYE6P0CI01 402 aa12.95□□□□□ -0.34
CHEK2-218ENST00000447421 SPDYE2Q495Y8 402 aa12.95□□□□□ -0.34
CHEK2-218ENST00000447421 ZNF692Q9BU19 519 aaPredicted RBP12.94□□□□□ -0.34
CHEK2-218ENST00000447421 POTEHQ6S545 545 aa12.91□□□□□ -0.34
CHEK2-218ENST00000447421 RBM42Q9BTD8 480 aaKnown RBP12.9□□□□□ -0.34
CHEK2-218ENST00000447421 SSUH2Q9Y2M2 353 aa12.82□□□□□ -0.36
CHEK2-218ENST00000447421 PABPN1Q86U42 306 aaKnown RBP eCLIP12.76□□□□□ -0.37
CHEK2-218ENST00000447421 PROM2Q8N271 834 aa12.75□□□□□ -0.37
CHEK2-218ENST00000447421 AKT1S1Q96B36 256 aa12.73□□□□□ -0.37
CHEK2-218ENST00000447421 FBXO3Q9UK99 471 aa12.67□□□□□ -0.38
CHEK2-218ENST00000447421 REM2Q8IYK8 340 aaPredicted RBP12.6□□□□□ -0.39
CHEK2-218ENST00000447421 STAG3Q9UJ98 1225 aa12.58□□□□□ -0.4
CHEK2-218ENST00000447421 SPDYE1Q8NFV5 336 aaPredicted RBP12.56□□□□□ -0.4
CHEK2-218ENST00000447421 CLEC11AQ9Y240 323 aa12.53□□□□□ -0.4
CHEK2-218ENST00000447421 PITPNM1O00562 1244 aa12.45□□□□□ -0.42
CHEK2-218ENST00000447421 VASPP50552 380 aaPredicted RBP12.45□□□□□ -0.42
CHEK2-218ENST00000447421 PRR29P0C7W0 189 aa12.42□□□□□ -0.42
CHEK2-218ENST00000447421 MIER1Q8N108 512 aa12.38□□□□□ -0.43
CHEK2-218ENST00000447421 PLCD3Q8N3E9 789 aa12.38□□□□□ -0.43
CHEK2-218ENST00000447421 PLEKHG5O94827 1062 aa12.35□□□□□ -0.43
CHEK2-218ENST00000447421 CHRDL2Q6WN34 429 aa12.3□□□□□ -0.44
CHEK2-218ENST00000447421 KLHL34Q8N239 644 aa12.29□□□□□ -0.44
CHEK2-218ENST00000447421 IFNLR1Q8IU57 520 aaPredicted RBP12.27□□□□□ -0.45
CHEK2-218ENST00000447421 ZBTB47Q9UFB7 747 aaPredicted RBP12.24□□□□□ -0.45
CHEK2-218ENST00000447421 CREBZFQ9NS37 354 aa12.22□□□□□ -0.45
CHEK2-218ENST00000447421 FXR2P51116 673 aaKnown RBP eCLIP12.18□□□□□ -0.46
CHEK2-218ENST00000447421 CHADLQ6NUI6 762 aa12.17□□□□□ -0.46
CHEK2-218ENST00000447421 PRKAR2AP13861 404 aaKnown RBP12.16□□□□□ -0.46
CHEK2-218ENST00000447421 PIP4P2Q8N4L2 257 aa12.15□□□□□ -0.46
CHEK2-218ENST00000447421 SPOCK2Q92563 424 aa12.15□□□□□ -0.46
CHEK2-218ENST00000447421 AMER1Q5JTC6 1135 aaPredicted RBP12.12□□□□□ -0.47
CHEK2-218ENST00000447421 NPM1P06748 294 aaKnown RBP eCLIP12.09□□□□□ -0.47
CHEK2-218ENST00000447421 MNX1P50219 401 aaPredicted RBP12.08□□□□□ -0.48
CHEK2-218ENST00000447421 FARP1Q9Y4F1 1045 aaPredicted RBP12.07□□□□□ -0.48
CHEK2-218ENST00000447421 RTN4Q9NQC3 1192 aaKnown RBP12.06□□□□□ -0.48
CHEK2-218ENST00000447421 NUBP1P53384 320 aa11.98□□□□□ -0.49
CHEK2-218ENST00000447421 CIZ1Q9ULV3 898 aaPredicted RBP11.97□□□□□ -0.49
CHEK2-218ENST00000447421 FAM212AQ96EL1 285 aa11.95□□□□□ -0.5
CHEK2-218ENST00000447421 DCAF8Q5TAQ9 597 aa11.94□□□□□ -0.5
CHEK2-218ENST00000447421 GSE1Q14687 1217 aa11.93□□□□□ -0.5
CHEK2-218ENST00000447421 RASEFQ8IZ41 740 aa11.93□□□□□ -0.5
CHEK2-218ENST00000447421 PAK3O75914 559 aaPredicted RBP11.88□□□□□ -0.51
CHEK2-218ENST00000447421 PKD2Q13563 968 aa11.88□□□□□ -0.51
CHEK2-218ENST00000447421 TSPYL2Q9H2G4 693 aaPredicted RBP11.88□□□□□ -0.51
CHEK2-218ENST00000447421 ECM2O94769 699 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms