RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 COL7A1Q02388 2944 aa0.71□□□□□ -2.29
LINC00440-201ENST00000446579 FAT1Q14517 4588 aa0.71□□□□□ -2.3
LINC00440-201ENST00000446579 STAB2Q8WWQ8 2551 aa0.71□□□□□ -2.3
LINC00440-201ENST00000446579 LRP1Q07954 4544 aaKnown RBP0.7□□□□□ -2.3
LINC00440-201ENST00000446579 COL6A5A8TX70 2615 aa0.7□□□□□ -2.3
LINC00440-201ENST00000446579 DNHD1Q96M86 4753 aa0.69□□□□□ -2.3
LINC00440-201ENST00000446579 MGAM2Q2M2H8 2515 aa0.69□□□□□ -2.3
LINC00440-201ENST00000446579 TNXBP22105 4242 aa0.69□□□□□ -2.3
LINC00440-201ENST00000446579 STAB1Q9NY15 2570 aa0.68□□□□□ -2.3
LINC00440-201ENST00000446579 RYR2Q92736 4967 aa0.68□□□□□ -2.3
LINC00440-201ENST00000446579 AHNAKQ09666 5890 aaKnown RBP0.67□□□□□ -2.3
LINC00440-201ENST00000446579 RYR1P21817 5038 aa0.67□□□□□ -2.3
LINC00440-201ENST00000446579 MT1HL1P0DM35 61 aa0.66□□□□□ -2.3
LINC00440-201ENST00000446579 KRTAP21-1Q3LI58 79 aa0.66□□□□□ -2.3
LINC00440-201ENST00000446579 KMT2CQ8NEZ4 4911 aaKnown RBP0.65□□□□□ -2.3
LINC00440-201ENST00000446579 MUC5BQ9HC84 5762 aaPredicted RBP0.65□□□□□ -2.3
LINC00440-201ENST00000446579 LPAP08519 4548 aa0.65□□□□□ -2.31
LINC00440-201ENST00000446579 MUC17Q685J3 4493 aa0.65□□□□□ -2.31
LINC00440-201ENST00000446579 RYR3Q15413 4870 aa0.65□□□□□ -2.31
LINC00440-201ENST00000446579 HERC1Q15751 4861 aa0.65□□□□□ -2.31
LINC00440-201ENST00000446579 M0R2T5 61 aa0.64□□□□□ -2.31
LINC00440-201ENST00000446579 ABCA13Q86UQ4 5058 aa0.64□□□□□ -2.31
LINC00440-201ENST00000446579 DMBT1Q9UGM3 2413 aaPredicted RBP0.63□□□□□ -2.31
LINC00440-201ENST00000446579 KRTAP8-1Q8IUC2 63 aa0.62□□□□□ -2.31
LINC00440-201ENST00000446579 SPRR2GQ9BYE4 73 aa0.62□□□□□ -2.31
LINC00440-201ENST00000446579 KIAA1109Q2LD37 5005 aa0.62□□□□□ -2.31
LINC00440-201ENST00000446579 LRP2P98164 4655 aa0.61□□□□□ -2.31
LINC00440-201ENST00000446579 MUC2Q02817 5179 aa0.61□□□□□ -2.31
LINC00440-201ENST00000446579 BIRC6Q9NR09 4857 aa0.61□□□□□ -2.31
LINC00440-201ENST00000446579 PCLOQ9Y6V0 5065 aa0.6□□□□□ -2.31
LINC00440-201ENST00000446579 RNF213Q63HN8 5207 aa0.6□□□□□ -2.31
LINC00440-201ENST00000446579 EPPK1P58107 5090 aaKnown RBP0.6□□□□□ -2.31
LINC00440-201ENST00000446579 HMCN2Q8NDA2 5059 aa0.59□□□□□ -2.31
LINC00440-201ENST00000446579 FLGP20930 4061 aaPredicted RBP0.59□□□□□ -2.32
LINC00440-201ENST00000446579 UBR4Q5T4S7 5183 aa0.58□□□□□ -2.32
LINC00440-201ENST00000446579 HERC2O95714 4834 aa0.58□□□□□ -2.32
LINC00440-201ENST00000446579 KRTAP19-2Q3LHN2 52 aa0.58□□□□□ -2.32
LINC00440-201ENST00000446579 KRTAP19-8Q3LI54 63 aa0.57□□□□□ -2.32
LINC00440-201ENST00000446579 MT2AP02795 61 aa0.56□□□□□ -2.32
LINC00440-201ENST00000446579 FAT4Q6V0I7 4981 aa0.55□□□□□ -2.32
LINC00440-201ENST00000446579 PRM1P04553 51 aa0.55□□□□□ -2.32
LINC00440-201ENST00000446579 MT1FP04733 61 aa0.55□□□□□ -2.32
LINC00440-201ENST00000446579 MT1HP80294 61 aa0.55□□□□□ -2.32
LINC00440-201ENST00000446579 MT1XP80297 61 aa0.55□□□□□ -2.32
LINC00440-201ENST00000446579 KRTAP19-5Q3LI72 72 aa0.54□□□□□ -2.32
LINC00440-201ENST00000446579 MT1BP07438 61 aa0.53□□□□□ -2.32
LINC00440-201ENST00000446579 USH2AO75445 5202 aa0.51□□□□□ -2.33
LINC00440-201ENST00000446579 MT1EP04732 61 aa0.51□□□□□ -2.33
LINC00440-201ENST00000446579 PHGR1C9JFL3 82 aa0.5□□□□□ -2.33
LINC00440-201ENST00000446579 MT1LQ93083 61 aa0.5□□□□□ -2.33
LINC00440-201ENST00000446579 MDN1Q9NU22 5596 aa0.5□□□□□ -2.33
LINC00440-201ENST00000446579 KMT2DO14686 5537 aa0.49□□□□□ -2.33
LINC00440-201ENST00000446579 KRTAP19-7Q3SYF9 63 aa0.48□□□□□ -2.33
LINC00440-201ENST00000446579 SYNE1Q8NF91 8797 aaKnown RBP0.48□□□□□ -2.33
LINC00440-201ENST00000446579 MT1AP04731 61 aa0.47□□□□□ -2.33
LINC00440-201ENST00000446579 MT1GP13640 62 aa0.47□□□□□ -2.33
LINC00440-201ENST00000446579 SSPOA2VEC9 5147 aa0.46□□□□□ -2.34
LINC00440-201ENST00000446579 MUC5ACP98088 5654 aa0.46□□□□□ -2.34
LINC00440-201ENST00000446579 SPRR2DP22532 72 aa0.45□□□□□ -2.34
LINC00440-201ENST00000446579 MT1MQ8N339 61 aa0.45□□□□□ -2.34
LINC00440-201ENST00000446579 FSIP2Q5CZC0 6907 aa0.44□□□□□ -2.34
LINC00440-201ENST00000446579 KRTAP19-6Q3LI70 58 aa0.44□□□□□ -2.34
LINC00440-201ENST00000446579 GPR98Q8WXG9 6306 aa0.44□□□□□ -2.34
LINC00440-201ENST00000446579 MACF1Q9UPN3 7388 aaKnown RBP0.44□□□□□ -2.34
LINC00440-201ENST00000446579 SYNE2Q8WXH0 6885 aaKnown RBP0.43□□□□□ -2.34
LINC00440-201ENST00000446579 SPRR2AP35326 72 aa0.43□□□□□ -2.34
LINC00440-201ENST00000446579 SPRR2FQ96RM1 72 aa0.43□□□□□ -2.34
LINC00440-201ENST00000446579 DSTQ03001 7570 aaKnown RBP0.42□□□□□ -2.34
LINC00440-201ENST00000446579 MUC12Q9UKN1 5478 aa0.41□□□□□ -2.34
LINC00440-201ENST00000446579 SPRR2BP35325 72 aa0.4□□□□□ -2.35
LINC00440-201ENST00000446579 KRTAP6-1Q3LI64 71 aa0.4□□□□□ -2.35
LINC00440-201ENST00000446579 KRTAP6-2Q3LI66 62 aa0.4□□□□□ -2.35
LINC00440-201ENST00000446579 SPRR2EP22531 72 aa0.39□□□□□ -2.35
LINC00440-201ENST00000446579 NEBP20929 6669 aa0.38□□□□□ -2.35
LINC00440-201ENST00000446579 MT4P47944 62 aa0.31□□□□□ -2.36
LINC00440-201ENST00000446579 KRTAP20-2Q3LI61 65 aa0.3□□□□□ -2.36
LINC00440-201ENST00000446579 KRTAP20-1Q3LI63 56 aa0.3□□□□□ -2.36
Retrieved 77 of 20,778 RNA–protein pairs in 54.5 ms