RNA–Protein interactions for RNA: ENST00000446548.1

LINC00578-204, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 519 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-204ENST00000446548 CAMK2N1Q7Z7J9 78 aa3.71□□□□□ -1.82
LINC00578-204ENST00000446548 PLAC4Q8WY50 150 aa3.69□□□□□ -1.82
LINC00578-204ENST00000446548 KRTAP25-1Q3LHN0 102 aa3.66□□□□□ -1.82
LINC00578-204ENST00000446548 MT1XP80297 61 aa3.62□□□□□ -1.83
LINC00578-204ENST00000446548 KRTAP5-1Q6L8H4 278 aa3.62□□□□□ -1.83
LINC00578-204ENST00000446548 USH2AO75445 5202 aa3.59□□□□□ -1.83
LINC00578-204ENST00000446548 TNP1P09430 55 aa3.55□□□□□ -1.84
LINC00578-204ENST00000446548 SSPOA2VEC9 5147 aa3.53□□□□□ -1.85
LINC00578-204ENST00000446548 PRO2289Q9P1D8 64 aa3.49□□□□□ -1.85
LINC00578-204ENST00000446548 PP632Q6XCG6 107 aa3.47□□□□□ -1.85
LINC00578-204ENST00000446548 LCE3EQ5T5B0 92 aa3.46□□□□□ -1.86
LINC00578-204ENST00000446548 LCE3AQ5TA76 89 aa3.45□□□□□ -1.86
LINC00578-204ENST00000446548 KRTAP19-6Q3LI70 58 aa3.44□□□□□ -1.86
LINC00578-204ENST00000446548 KRTAP5-4Q6L8H1 288 aa3.44□□□□□ -1.86
LINC00578-204ENST00000446548 KRTAP4-4Q9BYR3 166 aa3.44□□□□□ -1.86
LINC00578-204ENST00000446548 KRTAP8-1Q8IUC2 63 aa3.37□□□□□ -1.87
LINC00578-204ENST00000446548 KRTAP5-9P26371 169 aa3.32□□□□□ -1.88
LINC00578-204ENST00000446548 KMT2DO14686 5537 aa3.29□□□□□ -1.88
LINC00578-204ENST00000446548 FCGBPQ9Y6R7 5405 aaPredicted RBP3.29□□□□□ -1.88
LINC00578-204ENST00000446548 KRTAP12-3P60328 96 aa3.28□□□□□ -1.88
LINC00578-204ENST00000446548 KRTAP19-5Q3LI72 72 aa3.27□□□□□ -1.89
LINC00578-204ENST00000446548 FSIP2Q5CZC0 6907 aa3.25□□□□□ -1.89
LINC00578-204ENST00000446548 KRTAP19-7Q3SYF9 63 aa3.23□□□□□ -1.89
LINC00578-204ENST00000446548 CRCT1Q9UGL9 99 aa3.2□□□□□ -1.9
LINC00578-204ENST00000446548 SPRR5A0A1B0GTR4 108 aa3.17□□□□□ -1.9
LINC00578-204ENST00000446548 MT1EP04732 61 aa3.16□□□□□ -1.9
LINC00578-204ENST00000446548 KRTAP4-3Q9BYR4 195 aa3.12□□□□□ -1.91
LINC00578-204ENST00000446548 MT1LQ93083 61 aa3.11□□□□□ -1.91
LINC00578-204ENST00000446548 OBSCNQ5VST9 7968 aa3.08□□□□□ -1.92
LINC00578-204ENST00000446548 MACF1Q9UPN3 7388 aaKnown RBP3.05□□□□□ -1.92
LINC00578-204ENST00000446548 MUC12Q9UKN1 5478 aa3.04□□□□□ -1.92
LINC00578-204ENST00000446548 SPRR2FQ96RM1 72 aa3.03□□□□□ -1.92
LINC00578-204ENST00000446548 KRTAP19-3Q7Z4W3 81 aa3.01□□□□□ -1.93
LINC00578-204ENST00000446548 MT1MQ8N339 61 aa2.98□□□□□ -1.93
LINC00578-204ENST00000446548 MT1GP13640 62 aa2.97□□□□□ -1.93
LINC00578-204ENST00000446548 LUZP6Q538Z0 58 aa2.97□□□□□ -1.93
LINC00578-204ENST00000446548 KRTAP5-5Q701N2 237 aaPredicted RBP2.96□□□□□ -1.94
LINC00578-204ENST00000446548 KRTAP6-3Q3LI67 103 aa2.92□□□□□ -1.94
LINC00578-204ENST00000446548 SYNE2Q8WXH0 6885 aaKnown RBP2.89□□□□□ -1.95
LINC00578-204ENST00000446548 SPRR2EP22531 72 aa2.87□□□□□ -1.95
LINC00578-204ENST00000446548 SPRR2BP35325 72 aa2.87□□□□□ -1.95
LINC00578-204ENST00000446548 SPRR2AP35326 72 aa2.87□□□□□ -1.95
LINC00578-204ENST00000446548 MDN1Q9NU22 5596 aa2.87□□□□□ -1.95
LINC00578-204ENST00000446548 LCE1CQ5T751 118 aa2.84□□□□□ -1.95
LINC00578-204ENST00000446548 LCE1BQ5T7P3 118 aa2.84□□□□□ -1.95
LINC00578-204ENST00000446548 KRTAP5-2Q701N4 177 aa2.83□□□□□ -1.96
LINC00578-204ENST00000446548 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
LINC00578-204ENST00000446548 SPRR2DP22532 72 aa2.77□□□□□ -1.97
LINC00578-204ENST00000446548 KRTAP2-3P0C7H8 128 aa2.74□□□□□ -1.97
LINC00578-204ENST00000446548 KRTAP2-4Q9BYR9 128 aa2.74□□□□□ -1.97
LINC00578-204ENST00000446548 KRTAP2-1Q9BYU5 128 aa2.74□□□□□ -1.97
LINC00578-204ENST00000446548 NEBP20929 6669 aa2.69□□□□□ -1.98
LINC00578-204ENST00000446548 DSTQ03001 7570 aaKnown RBP2.66□□□□□ -1.98
LINC00578-204ENST00000446548 MT1AP04731 61 aa2.63□□□□□ -1.99
LINC00578-204ENST00000446548 KRTAP6-1Q3LI64 71 aa2.62□□□□□ -1.99
LINC00578-204ENST00000446548 SYNE1Q8NF91 8797 aaKnown RBP2.49□□□□□ -2.01
LINC00578-204ENST00000446548 KRTAP20-1Q3LI63 56 aa2.47□□□□□ -2.01
LINC00578-204ENST00000446548 INE1O15225 51 aa2.46□□□□□ -2.02
LINC00578-204ENST00000446548 KRTAP12-4P60329 112 aa2.42□□□□□ -2.02
LINC00578-204ENST00000446548 MT4P47944 62 aa2.39□□□□□ -2.03
LINC00578-204ENST00000446548 KRTAP6-2Q3LI66 62 aa2.39□□□□□ -2.03
LINC00578-204ENST00000446548 KRTAP20-2Q3LI61 65 aa2.37□□□□□ -2.03
LINC00578-204ENST00000446548 HMCN1Q96RW7 5635 aa2.34□□□□□ -2.03
LINC00578-204ENST00000446548 KRTAP5-8O75690 187 aa2.33□□□□□ -2.04
LINC00578-204ENST00000446548 KRTAP5-7Q6L8G8 165 aa2.32□□□□□ -2.04
LINC00578-204ENST00000446548 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
LINC00578-204ENST00000446548 AHNAK2Q8IVF2 5795 aa2.1□□□□□ -2.07
LINC00578-204ENST00000446548 PRM1P04553 51 aa2□□□□□ -2.09
LINC00578-204ENST00000446548 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
LINC00578-204ENST00000446548 MUC5ACP98088 5654 aa1.97□□□□□ -2.09
LINC00578-204ENST00000446548 KRTAP5-10Q6L8G5 202 aa1.96□□□□□ -2.1
LINC00578-204ENST00000446548 GPR98Q8WXG9 6306 aa1.78□□□□□ -2.12
LINC00578-204ENST00000446548 MUC5BQ9HC84 5762 aaPredicted RBP1.72□□□□□ -2.13
LINC00578-204ENST00000446548 AHNAKQ09666 5890 aaKnown RBP1.54□□□□□ -2.16
LINC00578-204ENST00000446548 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
LINC00578-204ENST00000446548 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
LINC00578-204ENST00000446548 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 33.7 ms