RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 KRTAP2-2Q9BYT5 123 aa3.41□□□□□ -1.86
FXR1-203ENST00000445140 MT3P25713 68 aa3.38□□□□□ -1.87
FXR1-203ENST00000445140 MACF1Q9UPN3 7388 aaKnown RBP3.36□□□□□ -1.87
FXR1-203ENST00000445140 SPRR5A0A1B0GTR4 108 aa3.34□□□□□ -1.87
FXR1-203ENST00000445140 KRTAP8-1Q8IUC2 63 aa3.34□□□□□ -1.87
FXR1-203ENST00000445140 PP632Q6XCG6 107 aa3.33□□□□□ -1.88
FXR1-203ENST00000445140 KRTAP4-8A0A0G2JLE6 195 aa3.31□□□□□ -1.88
FXR1-203ENST00000445140 KRTAP19-7Q3SYF9 63 aa3.29□□□□□ -1.88
FXR1-203ENST00000445140 LCE3AQ5TA76 89 aa3.29□□□□□ -1.88
FXR1-203ENST00000445140 KRTAP20-1Q3LI63 56 aa3.28□□□□□ -1.88
FXR1-203ENST00000445140 INE1O15225 51 aa3.26□□□□□ -1.89
FXR1-203ENST00000445140 LCE3BQ5TA77 95 aa3.26□□□□□ -1.89
FXR1-203ENST00000445140 MT1EP04732 61 aa3.25□□□□□ -1.89
FXR1-203ENST00000445140 KRTAP4-7Q9BYR0 210 aa3.25□□□□□ -1.89
FXR1-203ENST00000445140 KRTAP19-5Q3LI72 72 aa3.23□□□□□ -1.89
FXR1-203ENST00000445140 SPRR2FQ96RM1 72 aa3.22□□□□□ -1.89
FXR1-203ENST00000445140 KRTAP12-3P60328 96 aa3.2□□□□□ -1.9
FXR1-203ENST00000445140 SYNE2Q8WXH0 6885 aaKnown RBP3.2□□□□□ -1.9
FXR1-203ENST00000445140 LCE3CQ5T5A8 94 aa3.19□□□□□ -1.9
FXR1-203ENST00000445140 NEBP20929 6669 aa3.18□□□□□ -1.9
FXR1-203ENST00000445140 KRTAP19-3Q7Z4W3 81 aa3.16□□□□□ -1.9
FXR1-203ENST00000445140 KMT2DO14686 5537 aa3.16□□□□□ -1.9
FXR1-203ENST00000445140 MT1LQ93083 61 aa3.16□□□□□ -1.9
FXR1-203ENST00000445140 MT1GP13640 62 aa3.15□□□□□ -1.91
FXR1-203ENST00000445140 SPRR2EP22531 72 aa3.13□□□□□ -1.91
FXR1-203ENST00000445140 SPRR2BP35325 72 aa3.13□□□□□ -1.91
FXR1-203ENST00000445140 SPRR2AP35326 72 aa3.13□□□□□ -1.91
FXR1-203ENST00000445140 LCE1DQ5T752 114 aa3.13□□□□□ -1.91
FXR1-203ENST00000445140 KRTAP2-3P0C7H8 128 aa3.11□□□□□ -1.91
FXR1-203ENST00000445140 KRTAP2-4Q9BYR9 128 aa3.11□□□□□ -1.91
FXR1-203ENST00000445140 KRTAP4-9Q9BYQ8 210 aa3.1□□□□□ -1.91
FXR1-203ENST00000445140 MT1MQ8N339 61 aa3.06□□□□□ -1.92
FXR1-203ENST00000445140 MUC12Q9UKN1 5478 aa3.06□□□□□ -1.92
FXR1-203ENST00000445140 SPRR2DP22532 72 aa3.04□□□□□ -1.92
FXR1-203ENST00000445140 MDN1Q9NU22 5596 aa3.03□□□□□ -1.92
FXR1-203ENST00000445140 KRTAP4-2Q9BYR5 136 aa3.02□□□□□ -1.93
FXR1-203ENST00000445140 KRTAP5-3Q6L8H2 238 aa3.01□□□□□ -1.93
FXR1-203ENST00000445140 KRTAP2-1Q9BYU5 128 aa2.97□□□□□ -1.93
FXR1-203ENST00000445140 LCE3EQ5T5B0 92 aa2.95□□□□□ -1.94
FXR1-203ENST00000445140 LCE1EQ5T753 118 aa2.89□□□□□ -1.95
FXR1-203ENST00000445140 KRTAP4-11Q9BYQ6 195 aa2.86□□□□□ -1.95
FXR1-203ENST00000445140 KRTAP5-5Q701N2 237 aaPredicted RBP2.86□□□□□ -1.95
FXR1-203ENST00000445140 KRTAP4-3Q9BYR4 195 aa2.85□□□□□ -1.95
FXR1-203ENST00000445140 GPR98Q8WXG9 6306 aa2.84□□□□□ -1.95
FXR1-203ENST00000445140 KRTAP5-4Q6L8H1 288 aa2.84□□□□□ -1.95
FXR1-203ENST00000445140 KRTAP9-6A8MVA2 160 aa2.78□□□□□ -1.96
FXR1-203ENST00000445140 MT1AP04731 61 aa2.73□□□□□ -1.97
FXR1-203ENST00000445140 LCE3DQ9BYE3 92 aa2.67□□□□□ -1.98
FXR1-203ENST00000445140 DSTQ03001 7570 aaKnown RBP2.65□□□□□ -1.98
FXR1-203ENST00000445140 KRTAP12-4P60329 112 aa2.63□□□□□ -1.99
FXR1-203ENST00000445140 KRTAP6-1Q3LI64 71 aa2.61□□□□□ -1.99
FXR1-203ENST00000445140 KRTAP20-2Q3LI61 65 aa2.58□□□□□ -2
FXR1-203ENST00000445140 KRTAP5-7Q6L8G8 165 aa2.58□□□□□ -2
FXR1-203ENST00000445140 KRTAP5-10Q6L8G5 202 aa2.56□□□□□ -2
FXR1-203ENST00000445140 KRTAP5-2Q701N4 177 aa2.56□□□□□ -2
FXR1-203ENST00000445140 MT4P47944 62 aa2.55□□□□□ -2
FXR1-203ENST00000445140 HMCN1Q96RW7 5635 aa2.54□□□□□ -2
FXR1-203ENST00000445140 SYNE1Q8NF91 8797 aaKnown RBP2.5□□□□□ -2.01
FXR1-203ENST00000445140 AHNAK2Q8IVF2 5795 aa2.47□□□□□ -2.01
FXR1-203ENST00000445140 KRTAP6-2Q3LI66 62 aa2.42□□□□□ -2.02
FXR1-203ENST00000445140 AHNAKQ09666 5890 aaKnown RBP2.31□□□□□ -2.04
FXR1-203ENST00000445140 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.28□□□□□ -2.04
FXR1-203ENST00000445140 PRM1P04553 51 aa2.28□□□□□ -2.04
FXR1-203ENST00000445140 MUC5BQ9HC84 5762 aaPredicted RBP2.25□□□□□ -2.05
FXR1-203ENST00000445140 KRTAP5-8O75690 187 aa2.22□□□□□ -2.05
FXR1-203ENST00000445140 KRTAP5-1Q6L8H4 278 aa2.18□□□□□ -2.06
FXR1-203ENST00000445140 OBSCNQ5VST9 7968 aa2.16□□□□□ -2.06
FXR1-203ENST00000445140 MUC5ACP98088 5654 aa2.12□□□□□ -2.07
FXR1-203ENST00000445140 LCE1CQ5T751 118 aa2.08□□□□□ -2.08
FXR1-203ENST00000445140 LCE1BQ5T7P3 118 aa2.08□□□□□ -2.08
FXR1-203ENST00000445140 KRTAP5-11Q6L8G4 156 aa1.93□□□□□ -2.1
FXR1-203ENST00000445140 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
FXR1-203ENST00000445140 KRTAP21-2Q3LI59 83 aa1.76□□□□□ -2.13
FXR1-203ENST00000445140 KRTAP4-4Q9BYR3 166 aa1.72□□□□□ -2.13
FXR1-203ENST00000445140 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
FXR1-203ENST00000445140 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
FXR1-203ENST00000445140 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 11.7 ms