RNA–Protein interactions for RNA: ENST00000444772.3

SKIDA1-201, Transcript of SKI/DACH domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SKIDA1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-201ENST00000444772 KRTAP4-7Q9BYR0 210 aa7.45□□□□□ -1.22
SKIDA1-201ENST00000444772 KRTAP9-2Q9BYQ4 174 aa7.33□□□□□ -1.24
SKIDA1-201ENST00000444772 FCGBPQ9Y6R7 5405 aaPredicted RBP7.32□□□□□ -1.24
SKIDA1-201ENST00000444772 CRCT1Q9UGL9 99 aa7.07□□□□□ -1.28
SKIDA1-201ENST00000444772 MT1GP13640 62 aa7.03□□□□□ -1.28
SKIDA1-201ENST00000444772 KRTAP19-3Q7Z4W3 81 aa7.01□□□□□ -1.29
SKIDA1-201ENST00000444772 MT1MQ8N339 61 aa7□□□□□ -1.29
SKIDA1-201ENST00000444772 MACF1Q9UPN3 7388 aaKnown RBP6.99□□□□□ -1.29
SKIDA1-201ENST00000444772 KRTAP4-3Q9BYR4 195 aa6.96□□□□□ -1.3
SKIDA1-201ENST00000444772 LOC100996750A0A140TA64 210 aa6.95□□□□□ -1.3
SKIDA1-201ENST00000444772 MUC12Q9UKN1 5478 aa6.87□□□□□ -1.31
SKIDA1-201ENST00000444772 SYNE2Q8WXH0 6885 aaKnown RBP6.81□□□□□ -1.32
SKIDA1-201ENST00000444772 LCE5AQ5TCM9 118 aa6.76□□□□□ -1.33
SKIDA1-201ENST00000444772 SPRR2FQ96RM1 72 aa6.75□□□□□ -1.33
SKIDA1-201ENST00000444772 KRTAP9-6A0A140TA67 174 aa6.66□□□□□ -1.34
SKIDA1-201ENST00000444772 KRTAP12-4P60329 112 aa6.6□□□□□ -1.35
SKIDA1-201ENST00000444772 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.54□□□□□ -1.36
SKIDA1-201ENST00000444772 KRTAP5-9P26371 169 aa6.54□□□□□ -1.36
SKIDA1-201ENST00000444772 MDN1Q9NU22 5596 aa6.54□□□□□ -1.36
SKIDA1-201ENST00000444772 MT1AP04731 61 aa6.43□□□□□ -1.38
SKIDA1-201ENST00000444772 LCE3BQ5TA77 95 aa6.43□□□□□ -1.38
SKIDA1-201ENST00000444772 LCE1AQ5T7P2 110 aa6.42□□□□□ -1.38
SKIDA1-201ENST00000444772 DSTQ03001 7570 aaKnown RBP6.41□□□□□ -1.38
SKIDA1-201ENST00000444772 KRTAP6-3Q3LI67 103 aa6.36□□□□□ -1.39
SKIDA1-201ENST00000444772 SPRR2EP22531 72 aa6.35□□□□□ -1.39
SKIDA1-201ENST00000444772 SPRR2BP35325 72 aa6.35□□□□□ -1.39
SKIDA1-201ENST00000444772 SPRR2AP35326 72 aa6.35□□□□□ -1.39
SKIDA1-201ENST00000444772 KRTAP6-1Q3LI64 71 aa6.32□□□□□ -1.4
SKIDA1-201ENST00000444772 KRTAP4-9Q9BYQ8 210 aa6.23□□□□□ -1.41
SKIDA1-201ENST00000444772 KRTAP5-5Q701N2 237 aaPredicted RBP6.2□□□□□ -1.42
SKIDA1-201ENST00000444772 LCE3DQ9BYE3 92 aa6.19□□□□□ -1.42
SKIDA1-201ENST00000444772 KRTAP9-7A8MTY7 169 aa6.14□□□□□ -1.43
SKIDA1-201ENST00000444772 LCE3EQ5T5B0 92 aa6.12□□□□□ -1.43
SKIDA1-201ENST00000444772 SPRR2DP22532 72 aa6.1□□□□□ -1.43
SKIDA1-201ENST00000444772 SYNE1Q8NF91 8797 aaKnown RBP6.07□□□□□ -1.44
SKIDA1-201ENST00000444772 NEBP20929 6669 aa5.99□□□□□ -1.45
SKIDA1-201ENST00000444772 KRTAP9-4Q9BYQ2 154 aa5.96□□□□□ -1.46
SKIDA1-201ENST00000444772 PRM1P04553 51 aa5.82□□□□□ -1.48
SKIDA1-201ENST00000444772 MT3P25713 68 aa5.71□□□□□ -1.5
SKIDA1-201ENST00000444772 KRTAP6-2Q3LI66 62 aa5.66□□□□□ -1.5
SKIDA1-201ENST00000444772 KRTAP2-2Q9BYT5 123 aa5.54□□□□□ -1.52
SKIDA1-201ENST00000444772 KRTAP5-4Q6L8H1 288 aa5.49□□□□□ -1.53
SKIDA1-201ENST00000444772 KRTAP20-1Q3LI63 56 aa5.42□□□□□ -1.54
SKIDA1-201ENST00000444772 MT4P47944 62 aa5.37□□□□□ -1.55
SKIDA1-201ENST00000444772 KRTAP4-6Q9BYQ5 205 aa5.35□□□□□ -1.55
SKIDA1-201ENST00000444772 LCE4AQ5TA78 99 aa5.32□□□□□ -1.56
SKIDA1-201ENST00000444772 LCE1EQ5T753 118 aa5.29□□□□□ -1.56
SKIDA1-201ENST00000444772 OBSCNQ5VST9 7968 aa5.23□□□□□ -1.57
SKIDA1-201ENST00000444772 HMCN1Q96RW7 5635 aa5.21□□□□□ -1.58
SKIDA1-201ENST00000444772 LCE1DQ5T752 114 aa5.21□□□□□ -1.58
SKIDA1-201ENST00000444772 KRTAP20-2Q3LI61 65 aa5.17□□□□□ -1.58
SKIDA1-201ENST00000444772 KRTAP5-2Q701N4 177 aa5.1□□□□□ -1.59
SKIDA1-201ENST00000444772 LCE1FQ5T754 118 aa5□□□□□ -1.61
SKIDA1-201ENST00000444772 KRTAP5-3Q6L8H2 238 aa4.97□□□□□ -1.61
SKIDA1-201ENST00000444772 MUC5ACP98088 5654 aa4.69□□□□□ -1.66
SKIDA1-201ENST00000444772 GPR98Q8WXG9 6306 aa4.68□□□□□ -1.66
SKIDA1-201ENST00000444772 AHNAK2Q8IVF2 5795 aa4.51□□□□□ -1.69
SKIDA1-201ENST00000444772 KRTAP5-10Q6L8G5 202 aa4.5□□□□□ -1.69
SKIDA1-201ENST00000444772 LCE1BQ5T7P3 118 aa4.49□□□□□ -1.69
SKIDA1-201ENST00000444772 KRTAP5-1Q6L8H4 278 aa4.48□□□□□ -1.69
SKIDA1-201ENST00000444772 KRTAP4-11Q9BYQ6 195 aa4.46□□□□□ -1.7
SKIDA1-201ENST00000444772 LCE1CQ5T751 118 aa4.41□□□□□ -1.7
SKIDA1-201ENST00000444772 KRTAP4-2Q9BYR5 136 aa4.36□□□□□ -1.71
SKIDA1-201ENST00000444772 KRTAP5-8O75690 187 aa4.29□□□□□ -1.72
SKIDA1-201ENST00000444772 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.2□□□□□ -1.74
SKIDA1-201ENST00000444772 KRTAP5-7Q6L8G8 165 aa4.14□□□□□ -1.75
SKIDA1-201ENST00000444772 KRTAP21-2Q3LI59 83 aa4.11□□□□□ -1.75
SKIDA1-201ENST00000444772 KRTAP4-12Q9BQ66 201 aa4.1□□□□□ -1.75
SKIDA1-201ENST00000444772 KRTAP9-9Q9BYP9 154 aa4.06□□□□□ -1.76
SKIDA1-201ENST00000444772 MUC19Q7Z5P9 8384 aa4.06□□□□□ -1.76
SKIDA1-201ENST00000444772 AHNAKQ09666 5890 aaKnown RBP3.83□□□□□ -1.8
SKIDA1-201ENST00000444772 MUC5BQ9HC84 5762 aaPredicted RBP3.81□□□□□ -1.8
SKIDA1-201ENST00000444772 KRTAP5-11Q6L8G4 156 aa3.78□□□□□ -1.8
SKIDA1-201ENST00000444772 KRTAP21-1Q3LI58 79 aa3.72□□□□□ -1.81
SKIDA1-201ENST00000444772 KRTAP4-4Q9BYR3 166 aa3.63□□□□□ -1.83
SKIDA1-201ENST00000444772 PHGR1C9JFL3 82 aa3.25□□□□□ -1.89
SKIDA1-201ENST00000444772 MUC16Q8WXI7 14507 aa2.16□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 102.7 ms