RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 MT1LQ93083 61 aa5.55□□□□□ -1.52
SNX13-204ENST00000444712 MACF1Q9UPN3 7388 aaKnown RBP5.42□□□□□ -1.54
SNX13-204ENST00000444712 SYNE2Q8WXH0 6885 aaKnown RBP5.38□□□□□ -1.55
SNX13-204ENST00000444712 KRTAP19-3Q7Z4W3 81 aa5.37□□□□□ -1.55
SNX13-204ENST00000444712 MT1GP13640 62 aa5.36□□□□□ -1.55
SNX13-204ENST00000444712 SPRR2FQ96RM1 72 aa5.34□□□□□ -1.55
SNX13-204ENST00000444712 KRTAP4-7Q9BYR0 210 aa5.34□□□□□ -1.55
SNX13-204ENST00000444712 A0A0A0MQY5 61 aa5.3□□□□□ -1.56
SNX13-204ENST00000444712 KRTAP9-6A8MVA2 160 aa5.28□□□□□ -1.56
SNX13-204ENST00000444712 MT1MQ8N339 61 aa5.28□□□□□ -1.56
SNX13-204ENST00000444712 KRTAP6-3Q3LI67 103 aa5.25□□□□□ -1.57
SNX13-204ENST00000444712 LCE5AQ5TCM9 118 aa5.23□□□□□ -1.57
SNX13-204ENST00000444712 KRTAP5-9P26371 169 aa5.21□□□□□ -1.58
SNX13-204ENST00000444712 KRTAP4-3Q9BYR4 195 aa5.13□□□□□ -1.59
SNX13-204ENST00000444712 MUC12Q9UKN1 5478 aa5.09□□□□□ -1.59
SNX13-204ENST00000444712 NEBP20929 6669 aa5.06□□□□□ -1.6
SNX13-204ENST00000444712 LCE1AQ5T7P2 110 aa5.06□□□□□ -1.6
SNX13-204ENST00000444712 KRTAP2-3P0C7H8 128 aa5.04□□□□□ -1.6
SNX13-204ENST00000444712 KRTAP2-4Q9BYR9 128 aa5.04□□□□□ -1.6
SNX13-204ENST00000444712 KRTAP2-1Q9BYU5 128 aa5.04□□□□□ -1.6
SNX13-204ENST00000444712 SPRR2EP22531 72 aa5.01□□□□□ -1.61
SNX13-204ENST00000444712 SPRR2BP35325 72 aa5.01□□□□□ -1.61
SNX13-204ENST00000444712 SPRR2AP35326 72 aa5.01□□□□□ -1.61
SNX13-204ENST00000444712 LOC100996750A0A140TA64 210 aa5.01□□□□□ -1.61
SNX13-204ENST00000444712 INE1O15225 51 aa4.92□□□□□ -1.62
SNX13-204ENST00000444712 MDN1Q9NU22 5596 aa4.89□□□□□ -1.63
SNX13-204ENST00000444712 KRTAP20-1Q3LI63 56 aa4.85□□□□□ -1.63
SNX13-204ENST00000444712 SPRR2DP22532 72 aa4.83□□□□□ -1.64
SNX13-204ENST00000444712 MT1AP04731 61 aa4.73□□□□□ -1.65
SNX13-204ENST00000444712 KRTAP5-5Q701N2 237 aaPredicted RBP4.72□□□□□ -1.65
SNX13-204ENST00000444712 DSTQ03001 7570 aaKnown RBP4.71□□□□□ -1.65
SNX13-204ENST00000444712 KRTAP6-1Q3LI64 71 aa4.65□□□□□ -1.67
SNX13-204ENST00000444712 KRTAP4-6Q9BYQ5 205 aa4.62□□□□□ -1.67
SNX13-204ENST00000444712 LCE3BQ5TA77 95 aa4.61□□□□□ -1.67
SNX13-204ENST00000444712 KRTAP2-2Q9BYT5 123 aa4.58□□□□□ -1.68
SNX13-204ENST00000444712 KRTAP9-4Q9BYQ2 154 aa4.46□□□□□ -1.69
SNX13-204ENST00000444712 KRTAP5-4Q6L8H1 288 aa4.41□□□□□ -1.7
SNX13-204ENST00000444712 KRTAP12-4P60329 112 aa4.38□□□□□ -1.71
SNX13-204ENST00000444712 SYNE1Q8NF91 8797 aaKnown RBP4.35□□□□□ -1.71
SNX13-204ENST00000444712 LCE4AQ5TA78 99 aa4.31□□□□□ -1.72
SNX13-204ENST00000444712 KRTAP4-9Q9BYQ8 210 aa4.31□□□□□ -1.72
SNX13-204ENST00000444712 MT3P25713 68 aa4.29□□□□□ -1.72
SNX13-204ENST00000444712 LCE3DQ9BYE3 92 aa4.28□□□□□ -1.72
SNX13-204ENST00000444712 KRTAP6-2Q3LI66 62 aa4.24□□□□□ -1.73
SNX13-204ENST00000444712 LCE3EQ5T5B0 92 aa4.2□□□□□ -1.74
SNX13-204ENST00000444712 MT4P47944 62 aa4.16□□□□□ -1.74
SNX13-204ENST00000444712 KRTAP20-2Q3LI61 65 aa4.11□□□□□ -1.75
SNX13-204ENST00000444712 GPR98Q8WXG9 6306 aa4.11□□□□□ -1.75
SNX13-204ENST00000444712 KRTAP4-12Q9BQ66 201 aa4.09□□□□□ -1.76
SNX13-204ENST00000444712 LCE1DQ5T752 114 aa4.07□□□□□ -1.76
SNX13-204ENST00000444712 KRTAP5-2Q701N4 177 aa4.04□□□□□ -1.76
SNX13-204ENST00000444712 KRTAP9-9Q9BYP9 154 aa4.02□□□□□ -1.77
SNX13-204ENST00000444712 HMCN1Q96RW7 5635 aa4□□□□□ -1.77
SNX13-204ENST00000444712 KRTAP5-3Q6L8H2 238 aa3.94□□□□□ -1.78
SNX13-204ENST00000444712 AHNAK2Q8IVF2 5795 aa3.86□□□□□ -1.79
SNX13-204ENST00000444712 KRTAP5-10Q6L8G5 202 aa3.83□□□□□ -1.8
SNX13-204ENST00000444712 OBSCNQ5VST9 7968 aa3.76□□□□□ -1.81
SNX13-204ENST00000444712 PRM1P04553 51 aa3.75□□□□□ -1.81
SNX13-204ENST00000444712 KRTAP5-7Q6L8G8 165 aa3.7□□□□□ -1.82
SNX13-204ENST00000444712 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
SNX13-204ENST00000444712 KRTAP4-2Q9BYR5 136 aa3.64□□□□□ -1.83
SNX13-204ENST00000444712 KRTAP4-11Q9BYQ6 195 aa3.54□□□□□ -1.84
SNX13-204ENST00000444712 KRTAP5-1Q6L8H4 278 aa3.44□□□□□ -1.86
SNX13-204ENST00000444712 LCE1CQ5T751 118 aa3.41□□□□□ -1.86
SNX13-204ENST00000444712 LCE1BQ5T7P3 118 aa3.41□□□□□ -1.86
SNX13-204ENST00000444712 KRTAP5-8O75690 187 aa3.35□□□□□ -1.87
SNX13-204ENST00000444712 MUC5ACP98088 5654 aa3.34□□□□□ -1.88
SNX13-204ENST00000444712 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.22□□□□□ -1.89
SNX13-204ENST00000444712 MUC5BQ9HC84 5762 aaPredicted RBP3.2□□□□□ -1.9
SNX13-204ENST00000444712 AHNAKQ09666 5890 aaKnown RBP3.18□□□□□ -1.9
SNX13-204ENST00000444712 KRTAP21-2Q3LI59 83 aa3.03□□□□□ -1.92
SNX13-204ENST00000444712 KRTAP5-11Q6L8G4 156 aa2.99□□□□□ -1.93
SNX13-204ENST00000444712 LCE1FQ5T754 118 aa2.66□□□□□ -1.98
SNX13-204ENST00000444712 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.99
SNX13-204ENST00000444712 PHGR1C9JFL3 82 aa2.55□□□□□ -2
SNX13-204ENST00000444712 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
SNX13-204ENST00000444712 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
SNX13-204ENST00000444712 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 405.5 ms