RNA–Protein interactions for RNA: ENST00000443927.5

ITSN2-208, Transcript of intersectin 2, humanhuman

TSL 3

Gene ITSN2, Length 902 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-208ENST00000443927 LCE3AQ5TA76 89 aa6.93□□□□□ -1.3
ITSN2-208ENST00000443927 MT1MQ8N339 61 aa6.93□□□□□ -1.3
ITSN2-208ENST00000443927 MT1LQ93083 61 aa6.91□□□□□ -1.3
ITSN2-208ENST00000443927 LCE1DQ5T752 114 aa6.9□□□□□ -1.3
ITSN2-208ENST00000443927 HMCN1Q96RW7 5635 aa6.84□□□□□ -1.32
ITSN2-208ENST00000443927 LCE4AQ5TA78 99 aa6.82□□□□□ -1.32
ITSN2-208ENST00000443927 MT4P47944 62 aa6.81□□□□□ -1.32
ITSN2-208ENST00000443927 MIR22HGQ0VDD5 57 aa6.79□□□□□ -1.32
ITSN2-208ENST00000443927 KRTAP4-3Q9BYR4 195 aa6.78□□□□□ -1.32
ITSN2-208ENST00000443927 V9GYY9 64 aa6.72□□□□□ -1.33
ITSN2-208ENST00000443927 PSPHP1O15172 72 aa6.7□□□□□ -1.34
ITSN2-208ENST00000443927 AHNAK2Q8IVF2 5795 aa6.67□□□□□ -1.34
ITSN2-208ENST00000443927 KRTAP12-3P60328 96 aa6.67□□□□□ -1.34
ITSN2-208ENST00000443927 Q1T7F1 81 aa6.67□□□□□ -1.34
ITSN2-208ENST00000443927 K7ERS5 55 aa6.66□□□□□ -1.34
ITSN2-208ENST00000443927 KRTAP5-4Q6L8H1 288 aa6.66□□□□□ -1.34
ITSN2-208ENST00000443927 KRTAP25-1Q3LHN0 102 aa6.62□□□□□ -1.35
ITSN2-208ENST00000443927 KRTAP4-6Q9BYQ5 205 aa6.57□□□□□ -1.36
ITSN2-208ENST00000443927 KRTAP4-7Q9BYR0 210 aa6.57□□□□□ -1.36
ITSN2-208ENST00000443927 KRTAP5-10Q6L8G5 202 aa6.53□□□□□ -1.36
ITSN2-208ENST00000443927 A6NED7 52 aa6.47□□□□□ -1.37
ITSN2-208ENST00000443927 KRTAP23-1A1A580 65 aa6.38□□□□□ -1.39
ITSN2-208ENST00000443927 PCP4P48539 62 aa6.38□□□□□ -1.39
ITSN2-208ENST00000443927 LOC100996750A0A140TA64 210 aa6.36□□□□□ -1.39
ITSN2-208ENST00000443927 RPS28P62857 69 aaKnown RBP6.36□□□□□ -1.39
ITSN2-208ENST00000443927 KRTAP5-5Q701N2 237 aaPredicted RBP6.35□□□□□ -1.39
ITSN2-208ENST00000443927 KRTAP20-2Q3LI61 65 aa6.32□□□□□ -1.4
ITSN2-208ENST00000443927 KRTAP5-7Q6L8G8 165 aa6.32□□□□□ -1.4
ITSN2-208ENST00000443927 KRTAP5-3Q6L8H2 238 aa6.31□□□□□ -1.4
ITSN2-208ENST00000443927 CDC42SE1Q9NRR8 79 aa6.3□□□□□ -1.4
ITSN2-208ENST00000443927 KRTAP19-4Q3LI73 84 aa6.29□□□□□ -1.4
ITSN2-208ENST00000443927 KRTAP15-1Q3LI76 137 aa6.26□□□□□ -1.41
ITSN2-208ENST00000443927 SPRR5A0A1B0GTR4 108 aa6.25□□□□□ -1.41
ITSN2-208ENST00000443927 KRTAP12-4P60329 112 aa6.22□□□□□ -1.41
ITSN2-208ENST00000443927 ROMO1P60602 79 aa6.21□□□□□ -1.42
ITSN2-208ENST00000443927 LCE3CQ5T5A8 94 aa6.15□□□□□ -1.42
ITSN2-208ENST00000443927 SYNE1Q8NF91 8797 aaKnown RBP6.08□□□□□ -1.44
ITSN2-208ENST00000443927 A0A0A0MQY5 61 aa6.03□□□□□ -1.44
ITSN2-208ENST00000443927 MT1AP04731 61 aa5.87□□□□□ -1.47
ITSN2-208ENST00000443927 KRTAP6-1Q3LI64 71 aa5.85□□□□□ -1.47
ITSN2-208ENST00000443927 KRTAP5-2Q701N4 177 aa5.82□□□□□ -1.48
ITSN2-208ENST00000443927 KRTAP9-6A8MVA2 160 aa5.79□□□□□ -1.48
ITSN2-208ENST00000443927 KRTAP4-11Q9BYQ6 195 aa5.79□□□□□ -1.48
ITSN2-208ENST00000443927 KRTAP9-4Q9BYQ2 154 aa5.66□□□□□ -1.5
ITSN2-208ENST00000443927 KRTAP6-2Q3LI66 62 aa5.63□□□□□ -1.51
ITSN2-208ENST00000443927 KRTAP5-8O75690 187 aa5.6□□□□□ -1.51
ITSN2-208ENST00000443927 BRK1Q8WUW1 75 aa5.58□□□□□ -1.52
ITSN2-208ENST00000443927 OBSCNQ5VST9 7968 aa5.57□□□□□ -1.52
ITSN2-208ENST00000443927 KRTAP4-12Q9BQ66 201 aa5.55□□□□□ -1.52
ITSN2-208ENST00000443927 AHNAKQ09666 5890 aaKnown RBP5.53□□□□□ -1.52
ITSN2-208ENST00000443927 MUC5ACP98088 5654 aa5.52□□□□□ -1.53
ITSN2-208ENST00000443927 MUC5BQ9HC84 5762 aaPredicted RBP5.51□□□□□ -1.53
ITSN2-208ENST00000443927 KRTAP9-9Q9BYP9 154 aa5.44□□□□□ -1.54
ITSN2-208ENST00000443927 MT3P25713 68 aa5.37□□□□□ -1.55
ITSN2-208ENST00000443927 PMAIP1Q13794 54 aa5.26□□□□□ -1.57
ITSN2-208ENST00000443927 KRTAP5-1Q6L8H4 278 aa5.24□□□□□ -1.57
ITSN2-208ENST00000443927 PRAC1Q96KF2 57 aa5.06□□□□□ -1.6
ITSN2-208ENST00000443927 LCE1EQ5T753 118 aa4.95□□□□□ -1.62
ITSN2-208ENST00000443927 KRTAP4-2Q9BYR5 136 aa4.95□□□□□ -1.62
ITSN2-208ENST00000443927 PRO0628Q9UI54 55 aa4.84□□□□□ -1.63
ITSN2-208ENST00000443927 LCE1BQ5T7P3 118 aa4.72□□□□□ -1.65
ITSN2-208ENST00000443927 KTN1-AS1Q86SY8 53 aa4.63□□□□□ -1.67
ITSN2-208ENST00000443927 LCE1CQ5T751 118 aa4.59□□□□□ -1.67
ITSN2-208ENST00000443927 LCE3DQ9BYE3 92 aa4.45□□□□□ -1.7
ITSN2-208ENST00000443927 NDUFAF8A1L188 74 aa4.44□□□□□ -1.7
ITSN2-208ENST00000443927 LUZP6Q538Z0 58 aa4.28□□□□□ -1.72
ITSN2-208ENST00000443927 LCE3EQ5T5B0 92 aa4.2□□□□□ -1.74
ITSN2-208ENST00000443927 KRTAP5-11Q6L8G4 156 aa4.2□□□□□ -1.74
ITSN2-208ENST00000443927 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.16□□□□□ -1.74
ITSN2-208ENST00000443927 LCE1FQ5T754 118 aa4.08□□□□□ -1.76
ITSN2-208ENST00000443927 PHGR1C9JFL3 82 aa3.85□□□□□ -1.79
ITSN2-208ENST00000443927 KRTAP21-2Q3LI59 83 aa3.84□□□□□ -1.79
ITSN2-208ENST00000443927 KRTAP4-4Q9BYR3 166 aa3.58□□□□□ -1.84
ITSN2-208ENST00000443927 MUC19Q7Z5P9 8384 aa3.45□□□□□ -1.86
ITSN2-208ENST00000443927 PRM1P04553 51 aa3.18□□□□□ -1.9
ITSN2-208ENST00000443927 KRTAP21-1Q3LI58 79 aa2.91□□□□□ -1.94
ITSN2-208ENST00000443927 INE1O15225 51 aa2.72□□□□□ -1.97
ITSN2-208ENST00000443927 MUC16Q8WXI7 14507 aa2.37□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 69.6 ms