RNA–Protein interactions for RNA: ENST00000443700.5

AP1S3-206, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best) BASIC

Gene AP1S3, Length 1,785 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-206ENST00000443700 KRTAP19-5Q3LI72 72 aa5.7□□□□□ -1.5
AP1S3-206ENST00000443700 KRTAP4-11Q9BYQ6 195 aa5.54□□□□□ -1.52
AP1S3-206ENST00000443700 KRTAP19-4Q3LI73 84 aa5.52□□□□□ -1.53
AP1S3-206ENST00000443700 KRTAP9-6A8MVA2 160 aa5.43□□□□□ -1.54
AP1S3-206ENST00000443700 KRTAP2-3P0C7H8 128 aa5.42□□□□□ -1.54
AP1S3-206ENST00000443700 KRTAP2-4Q9BYR9 128 aa5.42□□□□□ -1.54
AP1S3-206ENST00000443700 KRTAP2-1Q9BYU5 128 aa5.42□□□□□ -1.54
AP1S3-206ENST00000443700 KRTAP19-7Q3SYF9 63 aa5.4□□□□□ -1.54
AP1S3-206ENST00000443700 MT1LQ93083 61 aa5.29□□□□□ -1.56
AP1S3-206ENST00000443700 MT1EP04732 61 aa5.27□□□□□ -1.57
AP1S3-206ENST00000443700 KMT2DO14686 5537 aa5.19□□□□□ -1.58
AP1S3-206ENST00000443700 USH2AO75445 5202 aa5.11□□□□□ -1.59
AP1S3-206ENST00000443700 KRTAP19-6Q3LI70 58 aa5.02□□□□□ -1.61
AP1S3-206ENST00000443700 SSPOA2VEC9 5147 aa4.97□□□□□ -1.61
AP1S3-206ENST00000443700 MT1MQ8N339 61 aa4.91□□□□□ -1.62
AP1S3-206ENST00000443700 MT1GP13640 62 aa4.91□□□□□ -1.62
AP1S3-206ENST00000443700 KRTAP19-3Q7Z4W3 81 aa4.9□□□□□ -1.63
AP1S3-206ENST00000443700 KRTAP4-3Q9BYR4 195 aa4.87□□□□□ -1.63
AP1S3-206ENST00000443700 LCE5AQ5TCM9 118 aa4.8□□□□□ -1.64
AP1S3-206ENST00000443700 KRTAP12-4P60329 112 aa4.78□□□□□ -1.64
AP1S3-206ENST00000443700 CRCT1Q9UGL9 99 aa4.76□□□□□ -1.65
AP1S3-206ENST00000443700 LCE4AQ5TA78 99 aa4.65□□□□□ -1.66
AP1S3-206ENST00000443700 MT1AP04731 61 aa4.6□□□□□ -1.67
AP1S3-206ENST00000443700 SPRR2FQ96RM1 72 aa4.58□□□□□ -1.68
AP1S3-206ENST00000443700 FCGBPQ9Y6R7 5405 aaPredicted RBP4.57□□□□□ -1.68
AP1S3-206ENST00000443700 MUC12Q9UKN1 5478 aa4.49□□□□□ -1.69
AP1S3-206ENST00000443700 KRTAP6-1Q3LI64 71 aa4.45□□□□□ -1.7
AP1S3-206ENST00000443700 LCE3DQ9BYE3 92 aa4.44□□□□□ -1.7
AP1S3-206ENST00000443700 LCE3EQ5T5B0 92 aa4.42□□□□□ -1.7
AP1S3-206ENST00000443700 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.4□□□□□ -1.71
AP1S3-206ENST00000443700 KRTAP9-7A8MTY7 169 aa4.35□□□□□ -1.71
AP1S3-206ENST00000443700 KRTAP5-5Q701N2 237 aaPredicted RBP4.31□□□□□ -1.72
AP1S3-206ENST00000443700 FSIP2Q5CZC0 6907 aa4.3□□□□□ -1.72
AP1S3-206ENST00000443700 PRM1P04553 51 aa4.27□□□□□ -1.73
AP1S3-206ENST00000443700 SYNE1Q8NF91 8797 aaKnown RBP4.25□□□□□ -1.73
AP1S3-206ENST00000443700 LCE1AQ5T7P2 110 aa4.24□□□□□ -1.73
AP1S3-206ENST00000443700 KRTAP5-9P26371 169 aa4.21□□□□□ -1.74
AP1S3-206ENST00000443700 DSTQ03001 7570 aaKnown RBP4.2□□□□□ -1.74
AP1S3-206ENST00000443700 SPRR2EP22531 72 aa4.13□□□□□ -1.75
AP1S3-206ENST00000443700 SPRR2BP35325 72 aa4.13□□□□□ -1.75
AP1S3-206ENST00000443700 SPRR2AP35326 72 aa4.13□□□□□ -1.75
AP1S3-206ENST00000443700 MACF1Q9UPN3 7388 aaKnown RBP4.11□□□□□ -1.75
AP1S3-206ENST00000443700 KRTAP6-2Q3LI66 62 aa4.09□□□□□ -1.76
AP1S3-206ENST00000443700 MT3P25713 68 aa4.02□□□□□ -1.77
AP1S3-206ENST00000443700 SPRR2DP22532 72 aa3.96□□□□□ -1.78
AP1S3-206ENST00000443700 MDN1Q9NU22 5596 aa3.94□□□□□ -1.78
AP1S3-206ENST00000443700 KRTAP6-3Q3LI67 103 aa3.94□□□□□ -1.78
AP1S3-206ENST00000443700 SYNE2Q8WXH0 6885 aaKnown RBP3.9□□□□□ -1.79
AP1S3-206ENST00000443700 KRTAP2-2Q9BYT5 123 aa3.79□□□□□ -1.8
AP1S3-206ENST00000443700 KRTAP5-4Q6L8H1 288 aa3.76□□□□□ -1.81
AP1S3-206ENST00000443700 KRTAP5-11Q6L8G4 156 aa3.65□□□□□ -1.83
AP1S3-206ENST00000443700 KRTAP5-1Q6L8H4 278 aa3.6□□□□□ -1.83
AP1S3-206ENST00000443700 KRTAP4-4Q9BYR3 166 aa3.56□□□□□ -1.84
AP1S3-206ENST00000443700 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
AP1S3-206ENST00000443700 KRTAP5-2Q701N4 177 aa3.52□□□□□ -1.85
AP1S3-206ENST00000443700 KRTAP20-2Q3LI61 65 aa3.47□□□□□ -1.85
AP1S3-206ENST00000443700 MT4P47944 62 aa3.43□□□□□ -1.86
AP1S3-206ENST00000443700 HMCN1Q96RW7 5635 aa3.35□□□□□ -1.87
AP1S3-206ENST00000443700 LCE1EQ5T753 118 aa3.25□□□□□ -1.89
AP1S3-206ENST00000443700 MUC5ACP98088 5654 aa3.25□□□□□ -1.89
AP1S3-206ENST00000443700 KRTAP20-1Q3LI63 56 aa3.25□□□□□ -1.89
AP1S3-206ENST00000443700 NEBP20929 6669 aa3.24□□□□□ -1.89
AP1S3-206ENST00000443700 KRTAP5-10Q6L8G5 202 aa3.22□□□□□ -1.89
AP1S3-206ENST00000443700 LCE1BQ5T7P3 118 aa3.14□□□□□ -1.91
AP1S3-206ENST00000443700 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
AP1S3-206ENST00000443700 KRTAP5-8O75690 187 aa3.02□□□□□ -1.93
AP1S3-206ENST00000443700 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
AP1S3-206ENST00000443700 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
AP1S3-206ENST00000443700 GPR98Q8WXG9 6306 aa2.8□□□□□ -1.96
AP1S3-206ENST00000443700 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
AP1S3-206ENST00000443700 KRTAP5-7Q6L8G8 165 aa2.72□□□□□ -1.97
AP1S3-206ENST00000443700 MUC5BQ9HC84 5762 aaPredicted RBP2.42□□□□□ -2.02
AP1S3-206ENST00000443700 AHNAK2Q8IVF2 5795 aa2.39□□□□□ -2.03
AP1S3-206ENST00000443700 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.04
AP1S3-206ENST00000443700 PHGR1C9JFL3 82 aa2.23□□□□□ -2.05
AP1S3-206ENST00000443700 AHNAKQ09666 5890 aaKnown RBP2.17□□□□□ -2.06
AP1S3-206ENST00000443700 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 172.9 ms