RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 PRAC1Q96KF2 57 aa2.93□□□□□ -1.94
TOP3B-209ENST00000442653 SMIM20Q8N5G0 67 aa2.92□□□□□ -1.94
TOP3B-209ENST00000442653 SPATA8Q6RVD6 105 aa2.91□□□□□ -1.94
TOP3B-209ENST00000442653 SPANXA2-OT1Q8N9U9 137 aa2.91□□□□□ -1.94
TOP3B-209ENST00000442653 SPINT4Q6UDR6 99 aa2.9□□□□□ -1.95
TOP3B-209ENST00000442653 KRTAP12-1P59990 96 aa2.89□□□□□ -1.95
TOP3B-209ENST00000442653 LCE1FQ5T754 118 aa2.89□□□□□ -1.95
TOP3B-209ENST00000442653 C10orf95Q9H7T3 257 aa2.87□□□□□ -1.95
TOP3B-209ENST00000442653 KRTAP5-7Q6L8G8 165 aa2.86□□□□□ -1.95
TOP3B-209ENST00000442653 COA5Q86WW8 74 aa2.86□□□□□ -1.95
TOP3B-209ENST00000442653 LCE3AQ5TA76 89 aa2.85□□□□□ -1.95
TOP3B-209ENST00000442653 A0A1B0GU33 70 aa2.84□□□□□ -1.95
TOP3B-209ENST00000442653 SERP1Q9Y6X1 66 aa2.84□□□□□ -1.95
TOP3B-209ENST00000442653 SEC61GP60059 68 aa2.83□□□□□ -1.96
TOP3B-209ENST00000442653 LCE1EQ5T753 118 aa2.83□□□□□ -1.96
TOP3B-209ENST00000442653 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
TOP3B-209ENST00000442653 KRTAP20-2Q3LI61 65 aa2.8□□□□□ -1.96
TOP3B-209ENST00000442653 SERP2Q8N6R1 65 aa2.79□□□□□ -1.96
TOP3B-209ENST00000442653 A8MU10 97 aa2.78□□□□□ -1.96
TOP3B-209ENST00000442653 K7ERU9 68 aa2.77□□□□□ -1.97
TOP3B-209ENST00000442653 TNP1P09430 55 aa2.77□□□□□ -1.97
TOP3B-209ENST00000442653 KRTAP5-5Q701N2 237 aaPredicted RBP2.77□□□□□ -1.97
TOP3B-209ENST00000442653 NDUFAF8A1L188 74 aa2.75□□□□□ -1.97
TOP3B-209ENST00000442653 SMIM26A0A096LP01 95 aa2.74□□□□□ -1.97
TOP3B-209ENST00000442653 SPRR5A0A1B0GTR4 108 aa2.74□□□□□ -1.97
TOP3B-209ENST00000442653 KRTAP12-3P60328 96 aa2.74□□□□□ -1.97
TOP3B-209ENST00000442653 SYNE1Q8NF91 8797 aaKnown RBP2.72□□□□□ -1.97
TOP3B-209ENST00000442653 KRTAP12-4P60329 112 aa2.7□□□□□ -1.98
TOP3B-209ENST00000442653 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.7□□□□□ -1.98
TOP3B-209ENST00000442653 A0A1B0GU69 56 aa2.69□□□□□ -1.98
TOP3B-209ENST00000442653 H7BZZ5 65 aa2.68□□□□□ -1.98
TOP3B-209ENST00000442653 LCE3CQ5T5A8 94 aa2.67□□□□□ -1.98
TOP3B-209ENST00000442653 COX7CP15954 63 aa2.64□□□□□ -1.99
TOP3B-209ENST00000442653 ANAPC13Q9BS18 74 aa2.57□□□□□ -2
TOP3B-209ENST00000442653 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
TOP3B-209ENST00000442653 KRTAP9-6A8MVA2 160 aa2.56□□□□□ -2
TOP3B-209ENST00000442653 KRTAP5-2Q701N4 177 aa2.56□□□□□ -2
TOP3B-209ENST00000442653 PRR15LQ9BU68 103 aa2.54□□□□□ -2
TOP3B-209ENST00000442653 MUC5ACP98088 5654 aa2.54□□□□□ -2
TOP3B-209ENST00000442653 OBSCNQ5VST9 7968 aa2.52□□□□□ -2.01
TOP3B-209ENST00000442653 CCDC179H3BU77 68 aa2.52□□□□□ -2.01
TOP3B-209ENST00000442653 KRTAP5-8O75690 187 aa2.52□□□□□ -2.01
TOP3B-209ENST00000442653 KRTAP25-1Q3LHN0 102 aa2.52□□□□□ -2.01
TOP3B-209ENST00000442653 MUC5BQ9HC84 5762 aaPredicted RBP2.51□□□□□ -2.01
TOP3B-209ENST00000442653 KRTAP6-1Q3LI64 71 aa2.51□□□□□ -2.01
TOP3B-209ENST00000442653 MT1AP04731 61 aa2.5□□□□□ -2.01
TOP3B-209ENST00000442653 LINC01558Q9Y6Z2 57 aa2.49□□□□□ -2.01
TOP3B-209ENST00000442653 UQCR11O14957 56 aa2.46□□□□□ -2.02
TOP3B-209ENST00000442653 KRTAP6-2Q3LI66 62 aa2.44□□□□□ -2.02
TOP3B-209ENST00000442653 TMEM258P61165 79 aa2.43□□□□□ -2.02
TOP3B-209ENST00000442653 LCE3EQ5T5B0 92 aa2.43□□□□□ -2.02
TOP3B-209ENST00000442653 ATP5EP56381 51 aaPredicted RBP2.41□□□□□ -2.02
TOP3B-209ENST00000442653 RPS28P62857 69 aaKnown RBP2.4□□□□□ -2.03
TOP3B-209ENST00000442653 V9GYY9 64 aa2.4□□□□□ -2.03
TOP3B-209ENST00000442653 MIR22HGQ0VDD5 57 aa2.39□□□□□ -2.03
TOP3B-209ENST00000442653 K7ERS5 55 aa2.35□□□□□ -2.03
TOP3B-209ENST00000442653 KRTAP5-1Q6L8H4 278 aa2.34□□□□□ -2.03
TOP3B-209ENST00000442653 PSPHP1O15172 72 aa2.32□□□□□ -2.04
TOP3B-209ENST00000442653 PRO0628Q9UI54 55 aa2.26□□□□□ -2.05
TOP3B-209ENST00000442653 KRTAP4-4Q9BYR3 166 aa2.24□□□□□ -2.05
TOP3B-209ENST00000442653 Q1T7F1 81 aa2.23□□□□□ -2.05
TOP3B-209ENST00000442653 CDC42SE1Q9NRR8 79 aa2.23□□□□□ -2.05
TOP3B-209ENST00000442653 BRK1Q8WUW1 75 aa2.21□□□□□ -2.06
TOP3B-209ENST00000442653 ROMO1P60602 79 aa2.19□□□□□ -2.06
TOP3B-209ENST00000442653 A6NED7 52 aa2.16□□□□□ -2.06
TOP3B-209ENST00000442653 LUZP6Q538Z0 58 aa2.14□□□□□ -2.07
TOP3B-209ENST00000442653 PMAIP1Q13794 54 aa2.1□□□□□ -2.07
TOP3B-209ENST00000442653 KTN1-AS1Q86SY8 53 aa2.07□□□□□ -2.08
TOP3B-209ENST00000442653 LCE1BQ5T7P3 118 aa2.04□□□□□ -2.08
TOP3B-209ENST00000442653 LCE3DQ9BYE3 92 aa2□□□□□ -2.09
TOP3B-209ENST00000442653 LCE1CQ5T751 118 aa1.99□□□□□ -2.09
TOP3B-209ENST00000442653 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
TOP3B-209ENST00000442653 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
TOP3B-209ENST00000442653 MUC19Q7Z5P9 8384 aa1.57□□□□□ -2.16
TOP3B-209ENST00000442653 INE1O15225 51 aa1.36□□□□□ -2.19
TOP3B-209ENST00000442653 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
TOP3B-209ENST00000442653 PRM1P04553 51 aa1.13□□□□□ -2.23
TOP3B-209ENST00000442653 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 41.7 ms