RNA–Protein interactions for RNA: ENST00000441883.5

MRPL28-204, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 800 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-204ENST00000441883 CCDC179H3BU77 68 aa9.35□□□□□ -0.91
MRPL28-204ENST00000441883 KRTAP5-4Q6L8H1 288 aa9.31□□□□□ -0.92
MRPL28-204ENST00000441883 PRR15LQ9BU68 103 aa9.3□□□□□ -0.92
MRPL28-204ENST00000441883 LINC01558Q9Y6Z2 57 aa9.25□□□□□ -0.93
MRPL28-204ENST00000441883 ATP5EP56381 51 aaPredicted RBP9.23□□□□□ -0.93
MRPL28-204ENST00000441883 KRTAP4-7Q9BYR0 210 aa9.17□□□□□ -0.94
MRPL28-204ENST00000441883 KRTAP12-3P60328 96 aa9.16□□□□□ -0.94
MRPL28-204ENST00000441883 KRTAP4-6Q9BYQ5 205 aa9.16□□□□□ -0.94
MRPL28-204ENST00000441883 AHNAK2Q8IVF2 5795 aa9.14□□□□□ -0.95
MRPL28-204ENST00000441883 UQCR11O14957 56 aa9.02□□□□□ -0.97
MRPL28-204ENST00000441883 KRTAP5-10Q6L8G5 202 aa8.97□□□□□ -0.97
MRPL28-204ENST00000441883 TMEM258P61165 79 aa8.92□□□□□ -0.98
MRPL28-204ENST00000441883 KRTAP5-5Q701N2 237 aaPredicted RBP8.87□□□□□ -0.99
MRPL28-204ENST00000441883 KRTAP25-1Q3LHN0 102 aa8.85□□□□□ -0.99
MRPL28-204ENST00000441883 MIR22HGQ0VDD5 57 aa8.81□□□□□ -1
MRPL28-204ENST00000441883 KRTAP20-2Q3LI61 65 aa8.78□□□□□ -1
MRPL28-204ENST00000441883 KRTAP5-3Q6L8H2 238 aa8.73□□□□□ -1.01
MRPL28-204ENST00000441883 LOC100996750A0A140TA64 210 aa8.7□□□□□ -1.02
MRPL28-204ENST00000441883 SPRR5A0A1B0GTR4 108 aa8.7□□□□□ -1.02
MRPL28-204ENST00000441883 SYNE1Q8NF91 8797 aaKnown RBP8.65□□□□□ -1.02
MRPL28-204ENST00000441883 KRTAP5-7Q6L8G8 165 aa8.64□□□□□ -1.03
MRPL28-204ENST00000441883 K7ERS5 55 aa8.62□□□□□ -1.03
MRPL28-204ENST00000441883 KRTAP12-4P60329 112 aa8.62□□□□□ -1.03
MRPL28-204ENST00000441883 KRTAP19-4Q3LI73 84 aa8.62□□□□□ -1.03
MRPL28-204ENST00000441883 PSPHP1O15172 72 aa8.54□□□□□ -1.04
MRPL28-204ENST00000441883 KRTAP23-1A1A580 65 aa8.52□□□□□ -1.05
MRPL28-204ENST00000441883 KRTAP15-1Q3LI76 137 aa8.5□□□□□ -1.05
MRPL28-204ENST00000441883 V9GYY9 64 aa8.48□□□□□ -1.05
MRPL28-204ENST00000441883 Q1T7F1 81 aa8.46□□□□□ -1.06
MRPL28-204ENST00000441883 LCE3CQ5T5A8 94 aa8.43□□□□□ -1.06
MRPL28-204ENST00000441883 A6NED7 52 aa8.2□□□□□ -1.1
MRPL28-204ENST00000441883 MT1AP04731 61 aa8.18□□□□□ -1.1
MRPL28-204ENST00000441883 CDC42SE1Q9NRR8 79 aa8.16□□□□□ -1.1
MRPL28-204ENST00000441883 KRTAP6-1Q3LI64 71 aa8.15□□□□□ -1.1
MRPL28-204ENST00000441883 KRTAP5-2Q701N4 177 aa8.13□□□□□ -1.11
MRPL28-204ENST00000441883 ROMO1P60602 79 aa8.06□□□□□ -1.12
MRPL28-204ENST00000441883 KRTAP4-11Q9BYQ6 195 aa8.06□□□□□ -1.12
MRPL28-204ENST00000441883 KRTAP9-6A8MVA2 160 aa8.03□□□□□ -1.12
MRPL28-204ENST00000441883 RPS28P62857 69 aaKnown RBP7.97□□□□□ -1.13
MRPL28-204ENST00000441883 KRTAP9-4Q9BYQ2 154 aa7.93□□□□□ -1.14
MRPL28-204ENST00000441883 KRTAP6-2Q3LI66 62 aa7.82□□□□□ -1.16
MRPL28-204ENST00000441883 KRTAP5-8O75690 187 aa7.81□□□□□ -1.16
MRPL28-204ENST00000441883 OBSCNQ5VST9 7968 aa7.72□□□□□ -1.17
MRPL28-204ENST00000441883 AHNAKQ09666 5890 aaKnown RBP7.56□□□□□ -1.2
MRPL28-204ENST00000441883 MUC5ACP98088 5654 aa7.54□□□□□ -1.2
MRPL28-204ENST00000441883 MUC5BQ9HC84 5762 aaPredicted RBP7.53□□□□□ -1.2
MRPL28-204ENST00000441883 MT3P25713 68 aa7.47□□□□□ -1.21
MRPL28-204ENST00000441883 PCP4P48539 62 aa7.39□□□□□ -1.23
MRPL28-204ENST00000441883 KRTAP9-9Q9BYP9 154 aa7.38□□□□□ -1.23
MRPL28-204ENST00000441883 KRTAP5-1Q6L8H4 278 aa7.32□□□□□ -1.24
MRPL28-204ENST00000441883 SVIPQ8NHG7 77 aa7.02□□□□□ -1.29
MRPL28-204ENST00000441883 LCE1EQ5T753 118 aa6.92□□□□□ -1.3
MRPL28-204ENST00000441883 BRK1Q8WUW1 75 aa6.74□□□□□ -1.33
MRPL28-204ENST00000441883 KRTAP4-2Q9BYR5 136 aa6.59□□□□□ -1.35
MRPL28-204ENST00000441883 LCE1BQ5T7P3 118 aa6.52□□□□□ -1.37
MRPL28-204ENST00000441883 LCE1CQ5T751 118 aa6.42□□□□□ -1.38
MRPL28-204ENST00000441883 PMAIP1Q13794 54 aa6.33□□□□□ -1.4
MRPL28-204ENST00000441883 PRAC1Q96KF2 57 aa6.22□□□□□ -1.41
MRPL28-204ENST00000441883 KRTAP4-12Q9BQ66 201 aa6.03□□□□□ -1.44
MRPL28-204ENST00000441883 LCE3DQ9BYE3 92 aa6.02□□□□□ -1.45
MRPL28-204ENST00000441883 PRO0628Q9UI54 55 aa5.87□□□□□ -1.47
MRPL28-204ENST00000441883 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.84□□□□□ -1.47
MRPL28-204ENST00000441883 KRTAP5-11Q6L8G4 156 aa5.83□□□□□ -1.48
MRPL28-204ENST00000441883 LCE1FQ5T754 118 aa5.71□□□□□ -1.5
MRPL28-204ENST00000441883 LCE3EQ5T5B0 92 aa5.63□□□□□ -1.51
MRPL28-204ENST00000441883 KTN1-AS1Q86SY8 53 aa5.41□□□□□ -1.54
MRPL28-204ENST00000441883 KRTAP21-2Q3LI59 83 aa5.4□□□□□ -1.54
MRPL28-204ENST00000441883 PHGR1C9JFL3 82 aa5.2□□□□□ -1.58
MRPL28-204ENST00000441883 LUZP6Q538Z0 58 aa5.2□□□□□ -1.58
MRPL28-204ENST00000441883 KRTAP4-4Q9BYR3 166 aa4.96□□□□□ -1.62
MRPL28-204ENST00000441883 H3BS24 57 aa4.9□□□□□ -1.63
MRPL28-204ENST00000441883 MUC19Q7Z5P9 8384 aa4.79□□□□□ -1.64
MRPL28-204ENST00000441883 A0A0A0MQY5 61 aa4.23□□□□□ -1.73
MRPL28-204ENST00000441883 NDUFAF8A1L188 74 aa4.22□□□□□ -1.73
MRPL28-204ENST00000441883 PRM1P04553 51 aa4.12□□□□□ -1.75
MRPL28-204ENST00000441883 KRTAP21-1Q3LI58 79 aa3.94□□□□□ -1.78
MRPL28-204ENST00000441883 INE1O15225 51 aa3.65□□□□□ -1.83
MRPL28-204ENST00000441883 MUC16Q8WXI7 14507 aa3.35□□□□□ -1.87
Retrieved 78 of 20,778 RNA–protein pairs in 144.7 ms