RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 RPS29P62273 56 aaKnown RBP2.11□□□□□ -2.07
HMGB3P9-201ENST00000441799 KRTAP13-4Q3LI77 160 aa2.11□□□□□ -2.07
HMGB3P9-201ENST00000441799 LCE3DQ9BYE3 92 aa2.11□□□□□ -2.07
HMGB3P9-201ENST00000441799 SYNE2Q8WXH0 6885 aaKnown RBP2.09□□□□□ -2.07
HMGB3P9-201ENST00000441799 C9orf92A6NGG3 77 aa2.08□□□□□ -2.08
HMGB3P9-201ENST00000441799 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
HMGB3P9-201ENST00000441799 KRTAP12-1P59990 96 aa2.07□□□□□ -2.08
HMGB3P9-201ENST00000441799 LPAP08519 4548 aa2.04□□□□□ -2.08
HMGB3P9-201ENST00000441799 A0A0D9SG42 100 aa2.04□□□□□ -2.08
HMGB3P9-201ENST00000441799 CRCT1Q9UGL9 99 aa2.04□□□□□ -2.08
HMGB3P9-201ENST00000441799 SMR3BP02814 79 aaPredicted RBP2.03□□□□□ -2.08
HMGB3P9-201ENST00000441799 KRTAP5-7Q6L8G8 165 aa2.03□□□□□ -2.08
HMGB3P9-201ENST00000441799 HMCN1Q96RW7 5635 aa2.01□□□□□ -2.09
HMGB3P9-201ENST00000441799 NEBP20929 6669 aa2□□□□□ -2.09
HMGB3P9-201ENST00000441799 MACF1Q9UPN3 7388 aaKnown RBP2□□□□□ -2.09
HMGB3P9-201ENST00000441799 M0QZ58 72 aa1.97□□□□□ -2.09
HMGB3P9-201ENST00000441799 SSPOA2VEC9 5147 aa1.97□□□□□ -2.09
HMGB3P9-201ENST00000441799 MT1HL1P0DM35 61 aa1.94□□□□□ -2.1
HMGB3P9-201ENST00000441799 KRTAP10-10P60014 251 aa1.94□□□□□ -2.1
HMGB3P9-201ENST00000441799 USH2AO75445 5202 aa1.94□□□□□ -2.1
HMGB3P9-201ENST00000441799 KRTAP10-4P60372 401 aaPredicted RBP1.92□□□□□ -2.1
HMGB3P9-201ENST00000441799 MUC17Q685J3 4493 aa1.92□□□□□ -2.1
HMGB3P9-201ENST00000441799 GPR98Q8WXG9 6306 aa1.9□□□□□ -2.11
HMGB3P9-201ENST00000441799 FCGBPQ9Y6R7 5405 aaPredicted RBP1.88□□□□□ -2.11
HMGB3P9-201ENST00000441799 KRTAP6-3Q3LI67 103 aa1.83□□□□□ -2.12
HMGB3P9-201ENST00000441799 MUC12Q9UKN1 5478 aa1.81□□□□□ -2.12
HMGB3P9-201ENST00000441799 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
HMGB3P9-201ENST00000441799 KRTAP12-4P60329 112 aa1.77□□□□□ -2.13
HMGB3P9-201ENST00000441799 TNP1P09430 55 aa1.75□□□□□ -2.13
HMGB3P9-201ENST00000441799 MDN1Q9NU22 5596 aa1.74□□□□□ -2.13
HMGB3P9-201ENST00000441799 KMT2DO14686 5537 aa1.72□□□□□ -2.13
HMGB3P9-201ENST00000441799 FLGP20930 4061 aaPredicted RBP1.69□□□□□ -2.14
HMGB3P9-201ENST00000441799 KRTAP20-1Q3LI63 56 aa1.69□□□□□ -2.14
HMGB3P9-201ENST00000441799 MT1HP80294 61 aa1.67□□□□□ -2.14
HMGB3P9-201ENST00000441799 KRTAP4-1Q9BYQ7 146 aa1.67□□□□□ -2.14
HMGB3P9-201ENST00000441799 M0R2T5 61 aa1.66□□□□□ -2.14
HMGB3P9-201ENST00000441799 KRTAP2-3P0C7H8 128 aa1.64□□□□□ -2.15
HMGB3P9-201ENST00000441799 KRTAP19-2Q3LHN2 52 aa1.64□□□□□ -2.15
HMGB3P9-201ENST00000441799 KRTAP2-4Q9BYR9 128 aa1.64□□□□□ -2.15
HMGB3P9-201ENST00000441799 KRTAP2-1Q9BYU5 128 aa1.64□□□□□ -2.15
HMGB3P9-201ENST00000441799 DSTQ03001 7570 aaKnown RBP1.58□□□□□ -2.16
HMGB3P9-201ENST00000441799 KRTAP8-1Q8IUC2 63 aa1.57□□□□□ -2.16
HMGB3P9-201ENST00000441799 KRTAP19-6Q3LI70 58 aa1.56□□□□□ -2.16
HMGB3P9-201ENST00000441799 SPRR2GQ9BYE4 73 aa1.56□□□□□ -2.16
HMGB3P9-201ENST00000441799 AHNAK2Q8IVF2 5795 aa1.56□□□□□ -2.16
HMGB3P9-201ENST00000441799 KRTAP12-3P60328 96 aa1.55□□□□□ -2.16
HMGB3P9-201ENST00000441799 MT2AP02795 61 aa1.49□□□□□ -2.17
HMGB3P9-201ENST00000441799 MT1FP04733 61 aa1.48□□□□□ -2.17
HMGB3P9-201ENST00000441799 KRTAP19-8Q3LI54 63 aa1.48□□□□□ -2.17
HMGB3P9-201ENST00000441799 AHNAKQ09666 5890 aaKnown RBP1.45□□□□□ -2.18
HMGB3P9-201ENST00000441799 MT1XP80297 61 aa1.44□□□□□ -2.18
HMGB3P9-201ENST00000441799 MT1BP07438 61 aa1.42□□□□□ -2.18
HMGB3P9-201ENST00000441799 SPRR2EP22531 72 aa1.4□□□□□ -2.19
HMGB3P9-201ENST00000441799 SPRR2BP35325 72 aa1.4□□□□□ -2.19
HMGB3P9-201ENST00000441799 SPRR2AP35326 72 aa1.4□□□□□ -2.19
HMGB3P9-201ENST00000441799 KRTAP19-5Q3LI72 72 aa1.38□□□□□ -2.19
HMGB3P9-201ENST00000441799 PRM1P04553 51 aa1.37□□□□□ -2.19
HMGB3P9-201ENST00000441799 SPRR2DP22532 72 aa1.36□□□□□ -2.19
HMGB3P9-201ENST00000441799 MUC5BQ9HC84 5762 aaPredicted RBP1.36□□□□□ -2.19
HMGB3P9-201ENST00000441799 KRTAP5-10Q6L8G5 202 aa1.35□□□□□ -2.19
HMGB3P9-201ENST00000441799 SPRR2FQ96RM1 72 aa1.35□□□□□ -2.19
HMGB3P9-201ENST00000441799 MUC5ACP98088 5654 aa1.3□□□□□ -2.2
HMGB3P9-201ENST00000441799 MT1LQ93083 61 aa1.27□□□□□ -2.21
HMGB3P9-201ENST00000441799 SYNE1Q8NF91 8797 aaKnown RBP1.26□□□□□ -2.21
HMGB3P9-201ENST00000441799 MT1AP04731 61 aa1.26□□□□□ -2.21
HMGB3P9-201ENST00000441799 MT1EP04732 61 aa1.26□□□□□ -2.21
HMGB3P9-201ENST00000441799 KRTAP19-7Q3SYF9 63 aa1.25□□□□□ -2.21
HMGB3P9-201ENST00000441799 MT4P47944 62 aa1.22□□□□□ -2.21
HMGB3P9-201ENST00000441799 MT1GP13640 62 aa1.2□□□□□ -2.22
HMGB3P9-201ENST00000441799 KRTAP19-3Q7Z4W3 81 aa1.19□□□□□ -2.22
HMGB3P9-201ENST00000441799 MT1MQ8N339 61 aa1.18□□□□□ -2.22
HMGB3P9-201ENST00000441799 KRTAP6-2Q3LI66 62 aa1.14□□□□□ -2.23
HMGB3P9-201ENST00000441799 KRTAP20-2Q3LI61 65 aa1.07□□□□□ -2.24
HMGB3P9-201ENST00000441799 KRTAP6-1Q3LI64 71 aa1.05□□□□□ -2.24
HMGB3P9-201ENST00000441799 KRTAP21-1Q3LI58 79 aa1.04□□□□□ -2.24
HMGB3P9-201ENST00000441799 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
HMGB3P9-201ENST00000441799 PHGR1C9JFL3 82 aa0.79□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 175.4 ms