RNA–Protein interactions for RNA: ENST00000441679.1

EPHA4-208, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 565 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-208ENST00000441679 A0A0D9SG42 100 aa3.24□□□□□ -1.89
EPHA4-208ENST00000441679 KRTAP5-9P26371 169 aa3.24□□□□□ -1.89
EPHA4-208ENST00000441679 CDC42SE1Q9NRR8 79 aa3.24□□□□□ -1.89
EPHA4-208ENST00000441679 KRTAP13-4Q3LI77 160 aa3.21□□□□□ -1.9
EPHA4-208ENST00000441679 LCE3DQ9BYE3 92 aa3.18□□□□□ -1.9
EPHA4-208ENST00000441679 KRTAP12-1P59990 96 aa3.17□□□□□ -1.9
EPHA4-208ENST00000441679 MT1BP07438 61 aa3.16□□□□□ -1.9
EPHA4-208ENST00000441679 LCE3AQ5TA76 89 aa3.16□□□□□ -1.9
EPHA4-208ENST00000441679 BRK1Q8WUW1 75 aa3.16□□□□□ -1.9
EPHA4-208ENST00000441679 OBSCNQ5VST9 7968 aa3.16□□□□□ -1.9
EPHA4-208ENST00000441679 KRTAP19-6Q3LI70 58 aa3.14□□□□□ -1.91
EPHA4-208ENST00000441679 CRCT1Q9UGL9 99 aa3.13□□□□□ -1.91
EPHA4-208ENST00000441679 TNP1P09430 55 aa3.07□□□□□ -1.92
EPHA4-208ENST00000441679 ROMO1P60602 79 aa3.05□□□□□ -1.92
EPHA4-208ENST00000441679 PMAIP1Q13794 54 aa3.05□□□□□ -1.92
EPHA4-208ENST00000441679 KRTAP25-1Q3LHN0 102 aa3.05□□□□□ -1.92
EPHA4-208ENST00000441679 MT1XP80297 61 aa3.04□□□□□ -1.92
EPHA4-208ENST00000441679 PP632Q6XCG6 107 aa3.03□□□□□ -1.92
EPHA4-208ENST00000441679 KRTAP4-3Q9BYR4 195 aa3.01□□□□□ -1.93
EPHA4-208ENST00000441679 C10orf95Q9H7T3 257 aa2.98□□□□□ -1.93
EPHA4-208ENST00000441679 USH2AO75445 5202 aa2.93□□□□□ -1.94
EPHA4-208ENST00000441679 FSIP2Q5CZC0 6907 aa2.93□□□□□ -1.94
EPHA4-208ENST00000441679 KRTAP8-1Q8IUC2 63 aa2.88□□□□□ -1.95
EPHA4-208ENST00000441679 KRTAP5-5Q701N2 237 aaPredicted RBP2.87□□□□□ -1.95
EPHA4-208ENST00000441679 SSPOA2VEC9 5147 aa2.86□□□□□ -1.95
EPHA4-208ENST00000441679 KTN1-AS1Q86SY8 53 aa2.84□□□□□ -1.95
EPHA4-208ENST00000441679 KRTAP6-3Q3LI67 103 aa2.83□□□□□ -1.96
EPHA4-208ENST00000441679 FCGBPQ9Y6R7 5405 aaPredicted RBP2.81□□□□□ -1.96
EPHA4-208ENST00000441679 KRTAP12-3P60328 96 aa2.77□□□□□ -1.97
EPHA4-208ENST00000441679 SPRR2FQ96RM1 72 aa2.76□□□□□ -1.97
EPHA4-208ENST00000441679 KRTAP5-2Q701N4 177 aa2.75□□□□□ -1.97
EPHA4-208ENST00000441679 KRTAP19-5Q3LI72 72 aa2.73□□□□□ -1.97
EPHA4-208ENST00000441679 KRTAP19-7Q3SYF9 63 aa2.7□□□□□ -1.98
EPHA4-208ENST00000441679 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
EPHA4-208ENST00000441679 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
EPHA4-208ENST00000441679 MT1EP04732 61 aa2.69□□□□□ -1.98
EPHA4-208ENST00000441679 MT1GP13640 62 aa2.69□□□□□ -1.98
EPHA4-208ENST00000441679 MACF1Q9UPN3 7388 aaKnown RBP2.67□□□□□ -1.98
EPHA4-208ENST00000441679 SPRR2EP22531 72 aa2.66□□□□□ -1.98
EPHA4-208ENST00000441679 SPRR2BP35325 72 aa2.66□□□□□ -1.98
EPHA4-208ENST00000441679 SPRR2AP35326 72 aa2.66□□□□□ -1.98
EPHA4-208ENST00000441679 KRTAP19-3Q7Z4W3 81 aa2.66□□□□□ -1.98
EPHA4-208ENST00000441679 MT1LQ93083 61 aa2.63□□□□□ -1.99
EPHA4-208ENST00000441679 SPRR2DP22532 72 aa2.58□□□□□ -2
EPHA4-208ENST00000441679 KMT2DO14686 5537 aa2.57□□□□□ -2
EPHA4-208ENST00000441679 SYNE2Q8WXH0 6885 aaKnown RBP2.55□□□□□ -2
EPHA4-208ENST00000441679 KRTAP2-3P0C7H8 128 aa2.54□□□□□ -2
EPHA4-208ENST00000441679 MT1MQ8N339 61 aa2.54□□□□□ -2
EPHA4-208ENST00000441679 KRTAP2-4Q9BYR9 128 aa2.54□□□□□ -2
EPHA4-208ENST00000441679 KRTAP20-1Q3LI63 56 aa2.48□□□□□ -2.01
EPHA4-208ENST00000441679 KRTAP2-1Q9BYU5 128 aa2.48□□□□□ -2.01
EPHA4-208ENST00000441679 MUC12Q9UKN1 5478 aa2.43□□□□□ -2.02
EPHA4-208ENST00000441679 KRTAP12-4P60329 112 aa2.41□□□□□ -2.02
EPHA4-208ENST00000441679 MDN1Q9NU22 5596 aa2.39□□□□□ -2.03
EPHA4-208ENST00000441679 NEBP20929 6669 aa2.35□□□□□ -2.03
EPHA4-208ENST00000441679 DSTQ03001 7570 aaKnown RBP2.27□□□□□ -2.05
EPHA4-208ENST00000441679 MT1AP04731 61 aa2.26□□□□□ -2.05
EPHA4-208ENST00000441679 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
EPHA4-208ENST00000441679 KRTAP5-7Q6L8G8 165 aa2.24□□□□□ -2.05
EPHA4-208ENST00000441679 KRTAP5-8O75690 187 aa2.23□□□□□ -2.05
EPHA4-208ENST00000441679 GPR98Q8WXG9 6306 aa2.2□□□□□ -2.06
EPHA4-208ENST00000441679 MT4P47944 62 aa2.18□□□□□ -2.06
EPHA4-208ENST00000441679 KRTAP6-1Q3LI64 71 aa2.17□□□□□ -2.06
EPHA4-208ENST00000441679 KRTAP20-2Q3LI61 65 aa2.12□□□□□ -2.07
EPHA4-208ENST00000441679 KRTAP6-2Q3LI66 62 aa2.05□□□□□ -2.08
EPHA4-208ENST00000441679 HMCN1Q96RW7 5635 aa1.95□□□□□ -2.1
EPHA4-208ENST00000441679 SYNE1Q8NF91 8797 aaKnown RBP1.94□□□□□ -2.1
EPHA4-208ENST00000441679 INE1O15225 51 aa1.92□□□□□ -2.1
EPHA4-208ENST00000441679 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
EPHA4-208ENST00000441679 KRTAP5-10Q6L8G5 202 aa1.87□□□□□ -2.11
EPHA4-208ENST00000441679 AHNAK2Q8IVF2 5795 aa1.86□□□□□ -2.11
EPHA4-208ENST00000441679 AHNAKQ09666 5890 aaKnown RBP1.7□□□□□ -2.14
EPHA4-208ENST00000441679 MUC5BQ9HC84 5762 aaPredicted RBP1.62□□□□□ -2.15
EPHA4-208ENST00000441679 MUC5ACP98088 5654 aa1.53□□□□□ -2.16
EPHA4-208ENST00000441679 PRM1P04553 51 aa1.51□□□□□ -2.17
EPHA4-208ENST00000441679 PHGR1C9JFL3 82 aa1.3□□□□□ -2.2
EPHA4-208ENST00000441679 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
EPHA4-208ENST00000441679 KRTAP21-1Q3LI58 79 aa0.92□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 153.4 ms