RNA–Protein interactions for RNA: ENST00000441439.6

LMO3-208, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-208ENST00000441439 M0R2T5 61 aa2.81□□□□□ -1.96
LMO3-208ENST00000441439 LCE1DQ5T752 114 aa2.81□□□□□ -1.96
LMO3-208ENST00000441439 KRTAP9-6A8MVA2 160 aa2.8□□□□□ -1.96
LMO3-208ENST00000441439 KRTAP4-9Q9BYQ8 210 aa2.75□□□□□ -1.97
LMO3-208ENST00000441439 KRTAP4-2Q9BYR5 136 aa2.73□□□□□ -1.97
LMO3-208ENST00000441439 KRTAP5-3Q6L8H2 238 aa2.71□□□□□ -1.98
LMO3-208ENST00000441439 KRTAP19-6Q3LI70 58 aa2.7□□□□□ -1.98
LMO3-208ENST00000441439 KRTAP19-7Q3SYF9 63 aa2.69□□□□□ -1.98
LMO3-208ENST00000441439 USH2AO75445 5202 aa2.69□□□□□ -1.98
LMO3-208ENST00000441439 SSPOA2VEC9 5147 aa2.68□□□□□ -1.98
LMO3-208ENST00000441439 MT1LQ93083 61 aa2.63□□□□□ -1.99
LMO3-208ENST00000441439 MT1EP04732 61 aa2.62□□□□□ -1.99
LMO3-208ENST00000441439 KRTAP4-11Q9BYQ6 195 aa2.6□□□□□ -1.99
LMO3-208ENST00000441439 KRTAP12-4P60329 112 aa2.49□□□□□ -2.01
LMO3-208ENST00000441439 HMCN1Q96RW7 5635 aa2.46□□□□□ -2.02
LMO3-208ENST00000441439 MT1AP04731 61 aa2.45□□□□□ -2.02
LMO3-208ENST00000441439 KMT2DO14686 5537 aa2.43□□□□□ -2.02
LMO3-208ENST00000441439 KRTAP5-9P26371 169 aa2.41□□□□□ -2.02
LMO3-208ENST00000441439 MT1MQ8N339 61 aa2.4□□□□□ -2.02
LMO3-208ENST00000441439 LCE5AQ5TCM9 118 aa2.4□□□□□ -2.03
LMO3-208ENST00000441439 MT1GP13640 62 aa2.39□□□□□ -2.03
LMO3-208ENST00000441439 LCE4AQ5TA78 99 aa2.37□□□□□ -2.03
LMO3-208ENST00000441439 KRTAP19-3Q7Z4W3 81 aa2.37□□□□□ -2.03
LMO3-208ENST00000441439 KRTAP5-5Q701N2 237 aaPredicted RBP2.33□□□□□ -2.04
LMO3-208ENST00000441439 KRTAP4-3Q9BYR4 195 aa2.33□□□□□ -2.04
LMO3-208ENST00000441439 KRTAP9-7A8MTY7 169 aa2.27□□□□□ -2.05
LMO3-208ENST00000441439 LCE3EQ5T5B0 92 aa2.27□□□□□ -2.05
LMO3-208ENST00000441439 FCGBPQ9Y6R7 5405 aaPredicted RBP2.27□□□□□ -2.05
LMO3-208ENST00000441439 LCE1AQ5T7P2 110 aa2.26□□□□□ -2.05
LMO3-208ENST00000441439 LCE3DQ9BYE3 92 aa2.25□□□□□ -2.05
LMO3-208ENST00000441439 PRM1P04553 51 aa2.23□□□□□ -2.05
LMO3-208ENST00000441439 KRTAP6-1Q3LI64 71 aa2.19□□□□□ -2.06
LMO3-208ENST00000441439 KRTAP6-3Q3LI67 103 aa2.19□□□□□ -2.06
LMO3-208ENST00000441439 SPRR2FQ96RM1 72 aa2.19□□□□□ -2.06
LMO3-208ENST00000441439 KRTAP2-2Q9BYT5 123 aa2.16□□□□□ -2.06
LMO3-208ENST00000441439 CRCT1Q9UGL9 99 aa2.16□□□□□ -2.06
LMO3-208ENST00000441439 KRTAP5-4Q6L8H1 288 aa2.13□□□□□ -2.07
LMO3-208ENST00000441439 MUC12Q9UKN1 5478 aa2.12□□□□□ -2.07
LMO3-208ENST00000441439 KRTAP6-2Q3LI66 62 aa2.11□□□□□ -2.07
LMO3-208ENST00000441439 SPRR2AP35326 72 aa2.05□□□□□ -2.08
LMO3-208ENST00000441439 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.04□□□□□ -2.08
LMO3-208ENST00000441439 KRTAP5-2Q701N4 177 aa2.01□□□□□ -2.09
LMO3-208ENST00000441439 SYNE1Q8NF91 8797 aaKnown RBP2□□□□□ -2.09
LMO3-208ENST00000441439 MUC5BQ9HC84 5762 aaPredicted RBP1.99□□□□□ -2.09
LMO3-208ENST00000441439 SPRR2EP22531 72 aa1.98□□□□□ -2.09
LMO3-208ENST00000441439 MACF1Q9UPN3 7388 aaKnown RBP1.97□□□□□ -2.09
LMO3-208ENST00000441439 MT3P25713 68 aa1.96□□□□□ -2.1
LMO3-208ENST00000441439 SPRR2BP35325 72 aa1.95□□□□□ -2.1
LMO3-208ENST00000441439 FSIP2Q5CZC0 6907 aa1.92□□□□□ -2.1
LMO3-208ENST00000441439 MDN1Q9NU22 5596 aa1.92□□□□□ -2.1
LMO3-208ENST00000441439 SPRR2DP22532 72 aa1.87□□□□□ -2.11
LMO3-208ENST00000441439 NEBP20929 6669 aa1.84□□□□□ -2.11
LMO3-208ENST00000441439 DSTQ03001 7570 aaKnown RBP1.84□□□□□ -2.12
LMO3-208ENST00000441439 KRTAP20-1Q3LI63 56 aa1.79□□□□□ -2.12
LMO3-208ENST00000441439 KRTAP20-2Q3LI61 65 aa1.79□□□□□ -2.12
LMO3-208ENST00000441439 OBSCNQ5VST9 7968 aa1.78□□□□□ -2.12
LMO3-208ENST00000441439 LCE1EQ5T753 118 aa1.78□□□□□ -2.13
LMO3-208ENST00000441439 KRTAP5-10Q6L8G5 202 aa1.74□□□□□ -2.13
LMO3-208ENST00000441439 SYNE2Q8WXH0 6885 aaKnown RBP1.74□□□□□ -2.13
LMO3-208ENST00000441439 KRTAP5-7Q6L8G8 165 aa1.74□□□□□ -2.13
LMO3-208ENST00000441439 LCE1FQ5T754 118 aa1.73□□□□□ -2.13
LMO3-208ENST00000441439 KRTAP5-11Q6L8G4 156 aa1.73□□□□□ -2.13
LMO3-208ENST00000441439 KRTAP5-1Q6L8H4 278 aa1.7□□□□□ -2.14
LMO3-208ENST00000441439 KRTAP5-8O75690 187 aa1.66□□□□□ -2.14
LMO3-208ENST00000441439 MUC5ACP98088 5654 aa1.64□□□□□ -2.15
LMO3-208ENST00000441439 LCE1CQ5T751 118 aa1.63□□□□□ -2.15
LMO3-208ENST00000441439 LCE1BQ5T7P3 118 aa1.63□□□□□ -2.15
LMO3-208ENST00000441439 KRTAP4-4Q9BYR3 166 aa1.57□□□□□ -2.16
LMO3-208ENST00000441439 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
LMO3-208ENST00000441439 MT4P47944 62 aa1.47□□□□□ -2.17
LMO3-208ENST00000441439 KRTAP21-2Q3LI59 83 aa1.46□□□□□ -2.18
LMO3-208ENST00000441439 AHNAK2Q8IVF2 5795 aa1.4□□□□□ -2.19
LMO3-208ENST00000441439 MUC19Q7Z5P9 8384 aa1.27□□□□□ -2.21
LMO3-208ENST00000441439 GPR98Q8WXG9 6306 aa1.23□□□□□ -2.21
LMO3-208ENST00000441439 PHGR1C9JFL3 82 aa1.21□□□□□ -2.22
LMO3-208ENST00000441439 AHNAKQ09666 5890 aaKnown RBP1.06□□□□□ -2.24
LMO3-208ENST00000441439 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 176.6 ms