RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 KRTAP4-8A0A0G2JLE6 195 aa4.37□□□□□ -1.71
LTBR-203ENST00000441074 KRTAP4-8Q9BYQ9 185 aa4.37□□□□□ -1.71
LTBR-203ENST00000441074 MACF1Q9UPN3 7388 aaKnown RBP4.33□□□□□ -1.72
LTBR-203ENST00000441074 KRTAP19-5Q3LI72 72 aa4.32□□□□□ -1.72
LTBR-203ENST00000441074 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.3□□□□□ -1.72
LTBR-203ENST00000441074 SYNE2Q8WXH0 6885 aaKnown RBP4.26□□□□□ -1.73
LTBR-203ENST00000441074 KRTAP2-3P0C7H8 128 aa4.24□□□□□ -1.73
LTBR-203ENST00000441074 KRTAP2-4Q9BYR9 128 aa4.24□□□□□ -1.73
LTBR-203ENST00000441074 KRTAP2-1Q9BYU5 128 aa4.24□□□□□ -1.73
LTBR-203ENST00000441074 KRTAP9-6A8MVA2 160 aa4.24□□□□□ -1.73
LTBR-203ENST00000441074 KRTAP4-12Q9BQ66 201 aa4.17□□□□□ -1.74
LTBR-203ENST00000441074 MUC12Q9UKN1 5478 aa4.15□□□□□ -1.75
LTBR-203ENST00000441074 KRTAP19-7Q3SYF9 63 aa4.12□□□□□ -1.75
LTBR-203ENST00000441074 KRTAP6-3Q3LI67 103 aa4.09□□□□□ -1.75
LTBR-203ENST00000441074 KRTAP4-7Q9BYR0 210 aa4.05□□□□□ -1.76
LTBR-203ENST00000441074 LOC100996750A0A140TA64 210 aa4.03□□□□□ -1.77
LTBR-203ENST00000441074 KRTAP4-6Q9BYQ5 205 aa4.03□□□□□ -1.77
LTBR-203ENST00000441074 KRTAP5-9P26371 169 aa4.02□□□□□ -1.77
LTBR-203ENST00000441074 SPRR2FQ96RM1 72 aa4.01□□□□□ -1.77
LTBR-203ENST00000441074 MT1EP04732 61 aa4□□□□□ -1.77
LTBR-203ENST00000441074 MT1LQ93083 61 aa4□□□□□ -1.77
LTBR-203ENST00000441074 MDN1Q9NU22 5596 aa3.99□□□□□ -1.77
LTBR-203ENST00000441074 DSTQ03001 7570 aaKnown RBP3.98□□□□□ -1.77
LTBR-203ENST00000441074 LCE1AQ5T7P2 110 aa3.93□□□□□ -1.78
LTBR-203ENST00000441074 LCE3BQ5TA77 95 aa3.9□□□□□ -1.79
LTBR-203ENST00000441074 GPR98Q8WXG9 6306 aa3.89□□□□□ -1.79
LTBR-203ENST00000441074 KRTAP4-3Q9BYR4 195 aa3.88□□□□□ -1.79
LTBR-203ENST00000441074 NEBP20929 6669 aa3.88□□□□□ -1.79
LTBR-203ENST00000441074 SPRR2EP22531 72 aa3.87□□□□□ -1.79
LTBR-203ENST00000441074 SPRR2BP35325 72 aa3.87□□□□□ -1.79
LTBR-203ENST00000441074 SPRR2AP35326 72 aa3.87□□□□□ -1.79
LTBR-203ENST00000441074 KRTAP12-4P60329 112 aa3.81□□□□□ -1.8
LTBR-203ENST00000441074 KRTAP19-3Q7Z4W3 81 aa3.81□□□□□ -1.8
LTBR-203ENST00000441074 MT3P25713 68 aa3.79□□□□□ -1.8
LTBR-203ENST00000441074 KRTAP20-1Q3LI63 56 aa3.77□□□□□ -1.81
LTBR-203ENST00000441074 MT1MQ8N339 61 aa3.76□□□□□ -1.81
LTBR-203ENST00000441074 MT1GP13640 62 aa3.74□□□□□ -1.81
LTBR-203ENST00000441074 LCE1FQ5T754 118 aa3.74□□□□□ -1.81
LTBR-203ENST00000441074 SPRR2DP22532 72 aa3.73□□□□□ -1.81
LTBR-203ENST00000441074 LCE1DQ5T752 114 aa3.64□□□□□ -1.83
LTBR-203ENST00000441074 KRTAP2-2Q9BYT5 123 aa3.55□□□□□ -1.84
LTBR-203ENST00000441074 SYNE1Q8NF91 8797 aaKnown RBP3.53□□□□□ -1.84
LTBR-203ENST00000441074 MT1AP04731 61 aa3.53□□□□□ -1.84
LTBR-203ENST00000441074 KRTAP4-9Q9BYQ8 210 aa3.48□□□□□ -1.85
LTBR-203ENST00000441074 KRTAP4-11Q9BYQ6 195 aa3.44□□□□□ -1.86
LTBR-203ENST00000441074 LCE3DQ9BYE3 92 aa3.43□□□□□ -1.86
LTBR-203ENST00000441074 LCE3EQ5T5B0 92 aa3.42□□□□□ -1.86
LTBR-203ENST00000441074 KRTAP5-5Q701N2 237 aaPredicted RBP3.41□□□□□ -1.86
LTBR-203ENST00000441074 PRM1P04553 51 aa3.4□□□□□ -1.87
LTBR-203ENST00000441074 KRTAP6-1Q3LI64 71 aa3.38□□□□□ -1.87
LTBR-203ENST00000441074 OBSCNQ5VST9 7968 aa3.34□□□□□ -1.87
LTBR-203ENST00000441074 KRTAP5-4Q6L8H1 288 aa3.28□□□□□ -1.88
LTBR-203ENST00000441074 MT4P47944 62 aa3.28□□□□□ -1.88
LTBR-203ENST00000441074 HMCN1Q96RW7 5635 aa3.21□□□□□ -1.89
LTBR-203ENST00000441074 KRTAP6-2Q3LI66 62 aa3.21□□□□□ -1.9
LTBR-203ENST00000441074 KRTAP4-2Q9BYR5 136 aa3.2□□□□□ -1.9
LTBR-203ENST00000441074 MUC5BQ9HC84 5762 aaPredicted RBP3.14□□□□□ -1.91
LTBR-203ENST00000441074 AHNAK2Q8IVF2 5795 aa3.11□□□□□ -1.91
LTBR-203ENST00000441074 KRTAP20-2Q3LI61 65 aa3.1□□□□□ -1.91
LTBR-203ENST00000441074 AHNAKQ09666 5890 aaKnown RBP3.08□□□□□ -1.92
LTBR-203ENST00000441074 KRTAP5-7Q6L8G8 165 aa3.03□□□□□ -1.92
LTBR-203ENST00000441074 KRTAP5-3Q6L8H2 238 aa2.99□□□□□ -1.93
LTBR-203ENST00000441074 KRTAP5-10Q6L8G5 202 aa2.95□□□□□ -1.94
LTBR-203ENST00000441074 KRTAP5-2Q701N4 177 aa2.92□□□□□ -1.94
LTBR-203ENST00000441074 LCE1EQ5T753 118 aa2.91□□□□□ -1.94
LTBR-203ENST00000441074 KRTAP5-8O75690 187 aa2.66□□□□□ -1.98
LTBR-203ENST00000441074 MUC5ACP98088 5654 aa2.63□□□□□ -1.99
LTBR-203ENST00000441074 KRTAP5-1Q6L8H4 278 aa2.59□□□□□ -1.99
LTBR-203ENST00000441074 LCE1BQ5T7P3 118 aa2.54□□□□□ -2
LTBR-203ENST00000441074 LCE1CQ5T751 118 aa2.39□□□□□ -2.03
LTBR-203ENST00000441074 KRTAP5-11Q6L8G4 156 aa2.36□□□□□ -2.03
LTBR-203ENST00000441074 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.25□□□□□ -2.05
LTBR-203ENST00000441074 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
LTBR-203ENST00000441074 KRTAP21-2Q3LI59 83 aa2.18□□□□□ -2.06
LTBR-203ENST00000441074 KRTAP4-4Q9BYR3 166 aa2.09□□□□□ -2.07
LTBR-203ENST00000441074 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
LTBR-203ENST00000441074 PHGR1C9JFL3 82 aa1.84□□□□□ -2.12
LTBR-203ENST00000441074 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 26.9 ms