RNA–Protein interactions for RNA: ENST00000440787.5

ARPC4-204, Transcript of actin related protein 2/3 complex subunit 4, humanhuman

TSL 3

Gene ARPC4, Length 910 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC4-204ENST00000440787 Q1T7F1 81 aa7.02□□□□□ -1.29
ARPC4-204ENST00000440787 MT1LQ93083 61 aa7.02□□□□□ -1.29
ARPC4-204ENST00000440787 MT1MQ8N339 61 aa6.97□□□□□ -1.29
ARPC4-204ENST00000440787 K7ERS5 55 aa6.95□□□□□ -1.3
ARPC4-204ENST00000440787 KRTAP25-1Q3LHN0 102 aa6.88□□□□□ -1.31
ARPC4-204ENST00000440787 KRTAP12-3P60328 96 aa6.86□□□□□ -1.31
ARPC4-204ENST00000440787 A6NED7 52 aa6.8□□□□□ -1.32
ARPC4-204ENST00000440787 KRTAP4-3Q9BYR4 195 aa6.78□□□□□ -1.32
ARPC4-204ENST00000440787 PCP4P48539 62 aa6.75□□□□□ -1.33
ARPC4-204ENST00000440787 KRTAP4-9Q9BYQ8 210 aa6.75□□□□□ -1.33
ARPC4-204ENST00000440787 RPS28P62857 69 aaKnown RBP6.74□□□□□ -1.33
ARPC4-204ENST00000440787 LCE4AQ5TA78 99 aa6.66□□□□□ -1.34
ARPC4-204ENST00000440787 KRTAP4-7Q9BYR0 210 aa6.66□□□□□ -1.34
ARPC4-204ENST00000440787 LCE1DQ5T752 114 aa6.63□□□□□ -1.35
ARPC4-204ENST00000440787 KRTAP23-1A1A580 65 aa6.61□□□□□ -1.35
ARPC4-204ENST00000440787 CDC42SE1Q9NRR8 79 aa6.6□□□□□ -1.35
ARPC4-204ENST00000440787 MT4P47944 62 aa6.57□□□□□ -1.36
ARPC4-204ENST00000440787 KRTAP5-4Q6L8H1 288 aa6.56□□□□□ -1.36
ARPC4-204ENST00000440787 ROMO1P60602 79 aa6.49□□□□□ -1.37
ARPC4-204ENST00000440787 HMCN1Q96RW7 5635 aa6.49□□□□□ -1.37
ARPC4-204ENST00000440787 GPR98Q8WXG9 6306 aa6.48□□□□□ -1.37
ARPC4-204ENST00000440787 KRTAP19-4Q3LI73 84 aa6.48□□□□□ -1.37
ARPC4-204ENST00000440787 KRTAP15-1Q3LI76 137 aa6.45□□□□□ -1.38
ARPC4-204ENST00000440787 KRTAP4-6Q9BYQ5 205 aa6.39□□□□□ -1.39
ARPC4-204ENST00000440787 KRTAP5-5Q701N2 237 aaPredicted RBP6.37□□□□□ -1.39
ARPC4-204ENST00000440787 LCE3CQ5T5A8 94 aa6.33□□□□□ -1.4
ARPC4-204ENST00000440787 LOC100996750A0A140TA64 210 aa6.31□□□□□ -1.4
ARPC4-204ENST00000440787 AHNAK2Q8IVF2 5795 aa6.21□□□□□ -1.42
ARPC4-204ENST00000440787 KRTAP20-2Q3LI61 65 aa6.18□□□□□ -1.42
ARPC4-204ENST00000440787 SPRR5A0A1B0GTR4 108 aa6.17□□□□□ -1.42
ARPC4-204ENST00000440787 KRTAP12-4P60329 112 aa6.17□□□□□ -1.42
ARPC4-204ENST00000440787 KRTAP5-10Q6L8G5 202 aa6.09□□□□□ -1.43
ARPC4-204ENST00000440787 SYNE1Q8NF91 8797 aaKnown RBP6.09□□□□□ -1.43
ARPC4-204ENST00000440787 KRTAP5-3Q6L8H2 238 aa5.99□□□□□ -1.45
ARPC4-204ENST00000440787 MT1AP04731 61 aa5.98□□□□□ -1.45
ARPC4-204ENST00000440787 KRTAP9-6A8MVA2 160 aa5.97□□□□□ -1.45
ARPC4-204ENST00000440787 BRK1Q8WUW1 75 aa5.95□□□□□ -1.46
ARPC4-204ENST00000440787 KRTAP6-1Q3LI64 71 aa5.93□□□□□ -1.46
ARPC4-204ENST00000440787 KRTAP5-7Q6L8G8 165 aa5.84□□□□□ -1.47
ARPC4-204ENST00000440787 KRTAP5-2Q701N4 177 aa5.77□□□□□ -1.49
ARPC4-204ENST00000440787 KRTAP9-4Q9BYQ2 154 aa5.75□□□□□ -1.49
ARPC4-204ENST00000440787 KRTAP6-2Q3LI66 62 aa5.64□□□□□ -1.51
ARPC4-204ENST00000440787 KRTAP4-11Q9BYQ6 195 aa5.61□□□□□ -1.51
ARPC4-204ENST00000440787 PMAIP1Q13794 54 aa5.58□□□□□ -1.52
ARPC4-204ENST00000440787 MT3P25713 68 aa5.46□□□□□ -1.54
ARPC4-204ENST00000440787 KRTAP5-8O75690 187 aa5.42□□□□□ -1.54
ARPC4-204ENST00000440787 PRAC1Q96KF2 57 aa5.37□□□□□ -1.55
ARPC4-204ENST00000440787 OBSCNQ5VST9 7968 aa5.35□□□□□ -1.55
ARPC4-204ENST00000440787 PRO0628Q9UI54 55 aa5.23□□□□□ -1.57
ARPC4-204ENST00000440787 KRTAP5-1Q6L8H4 278 aa5.15□□□□□ -1.59
ARPC4-204ENST00000440787 KRTAP9-9Q9BYP9 154 aa5.12□□□□□ -1.59
ARPC4-204ENST00000440787 AHNAKQ09666 5890 aaKnown RBP5.07□□□□□ -1.6
ARPC4-204ENST00000440787 MUC5ACP98088 5654 aa5.07□□□□□ -1.6
ARPC4-204ENST00000440787 MUC5BQ9HC84 5762 aaPredicted RBP5.07□□□□□ -1.6
ARPC4-204ENST00000440787 KTN1-AS1Q86SY8 53 aa5.01□□□□□ -1.61
ARPC4-204ENST00000440787 LCE1EQ5T753 118 aa4.97□□□□□ -1.61
ARPC4-204ENST00000440787 SVIPQ8NHG7 77 aa4.81□□□□□ -1.64
ARPC4-204ENST00000440787 KRTAP4-2Q9BYR5 136 aa4.7□□□□□ -1.66
ARPC4-204ENST00000440787 LCE1BQ5T7P3 118 aa4.68□□□□□ -1.66
ARPC4-204ENST00000440787 LCE1CQ5T751 118 aa4.62□□□□□ -1.67
ARPC4-204ENST00000440787 LCE3DQ9BYE3 92 aa4.59□□□□□ -1.67
ARPC4-204ENST00000440787 LUZP6Q538Z0 58 aa4.53□□□□□ -1.68
ARPC4-204ENST00000440787 LCE3EQ5T5B0 92 aa4.34□□□□□ -1.71
ARPC4-204ENST00000440787 H3BS24 57 aa4.32□□□□□ -1.72
ARPC4-204ENST00000440787 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.22□□□□□ -1.73
ARPC4-204ENST00000440787 KRTAP4-12Q9BQ66 201 aa4.19□□□□□ -1.74
ARPC4-204ENST00000440787 KRTAP5-11Q6L8G4 156 aa4.18□□□□□ -1.74
ARPC4-204ENST00000440787 LCE1FQ5T754 118 aa4.03□□□□□ -1.76
ARPC4-204ENST00000440787 KRTAP21-2Q3LI59 83 aa3.9□□□□□ -1.79
ARPC4-204ENST00000440787 NDUFAF8A1L188 74 aa3.68□□□□□ -1.82
ARPC4-204ENST00000440787 PHGR1C9JFL3 82 aa3.61□□□□□ -1.83
ARPC4-204ENST00000440787 KRTAP4-4Q9BYR3 166 aa3.55□□□□□ -1.84
ARPC4-204ENST00000440787 A0A0A0MQY5 61 aa3.51□□□□□ -1.85
ARPC4-204ENST00000440787 PRM1P04553 51 aa3.33□□□□□ -1.88
ARPC4-204ENST00000440787 MUC19Q7Z5P9 8384 aa3.31□□□□□ -1.88
ARPC4-204ENST00000440787 INE1O15225 51 aa3.01□□□□□ -1.93
ARPC4-204ENST00000440787 KRTAP21-1Q3LI58 79 aa2.69□□□□□ -1.98
ARPC4-204ENST00000440787 MUC16Q8WXI7 14507 aa2.28□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 214.7 ms