RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 TMEM258P61165 79 aa5.85□□□□□ -1.47
COL16A1-204ENST00000440437 KRTAP4-3Q9BYR4 195 aa5.85□□□□□ -1.47
COL16A1-204ENST00000440437 HMCN1Q96RW7 5635 aa5.84□□□□□ -1.47
COL16A1-204ENST00000440437 PRR15LQ9BU68 103 aa5.82□□□□□ -1.48
COL16A1-204ENST00000440437 KRTAP5-4Q6L8H1 288 aa5.81□□□□□ -1.48
COL16A1-204ENST00000440437 LINC01558Q9Y6Z2 57 aa5.8□□□□□ -1.48
COL16A1-204ENST00000440437 KRTAP4-6Q9BYQ5 205 aa5.69□□□□□ -1.5
COL16A1-204ENST00000440437 KRTAP12-3P60328 96 aa5.68□□□□□ -1.5
COL16A1-204ENST00000440437 KRTAP4-7Q9BYR0 210 aa5.68□□□□□ -1.5
COL16A1-204ENST00000440437 AHNAK2Q8IVF2 5795 aa5.66□□□□□ -1.5
COL16A1-204ENST00000440437 UQCR11O14957 56 aa5.63□□□□□ -1.51
COL16A1-204ENST00000440437 KRTAP5-10Q6L8G5 202 aa5.61□□□□□ -1.51
COL16A1-204ENST00000440437 KRTAP5-5Q701N2 237 aaPredicted RBP5.54□□□□□ -1.52
COL16A1-204ENST00000440437 V9GYY9 64 aa5.54□□□□□ -1.52
COL16A1-204ENST00000440437 MIR22HGQ0VDD5 57 aa5.49□□□□□ -1.53
COL16A1-204ENST00000440437 Q1T7F1 81 aa5.49□□□□□ -1.53
COL16A1-204ENST00000440437 KRTAP25-1Q3LHN0 102 aa5.48□□□□□ -1.53
COL16A1-204ENST00000440437 KRTAP20-2Q3LI61 65 aa5.48□□□□□ -1.53
COL16A1-204ENST00000440437 KRTAP5-3Q6L8H2 238 aa5.45□□□□□ -1.54
COL16A1-204ENST00000440437 SPRR5A0A1B0GTR4 108 aa5.43□□□□□ -1.54
COL16A1-204ENST00000440437 PSPHP1O15172 72 aa5.42□□□□□ -1.54
COL16A1-204ENST00000440437 K7ERS5 55 aa5.4□□□□□ -1.54
COL16A1-204ENST00000440437 KRTAP5-7Q6L8G8 165 aa5.4□□□□□ -1.54
COL16A1-204ENST00000440437 LOC100996750A0A140TA64 210 aa5.39□□□□□ -1.55
COL16A1-204ENST00000440437 KRTAP12-4P60329 112 aa5.36□□□□□ -1.55
COL16A1-204ENST00000440437 KRTAP19-4Q3LI73 84 aa5.36□□□□□ -1.55
COL16A1-204ENST00000440437 RPS28P62857 69 aaKnown RBP5.31□□□□□ -1.56
COL16A1-204ENST00000440437 SYNE1Q8NF91 8797 aaKnown RBP5.31□□□□□ -1.56
COL16A1-204ENST00000440437 KRTAP23-1A1A580 65 aa5.29□□□□□ -1.56
COL16A1-204ENST00000440437 A6NED7 52 aa5.26□□□□□ -1.57
COL16A1-204ENST00000440437 PCP4P48539 62 aa5.26□□□□□ -1.57
COL16A1-204ENST00000440437 KRTAP15-1Q3LI76 137 aa5.26□□□□□ -1.57
COL16A1-204ENST00000440437 LCE3CQ5T5A8 94 aa5.22□□□□□ -1.57
COL16A1-204ENST00000440437 CDC42SE1Q9NRR8 79 aa5.11□□□□□ -1.59
COL16A1-204ENST00000440437 MT1AP04731 61 aa5.09□□□□□ -1.59
COL16A1-204ENST00000440437 KRTAP6-1Q3LI64 71 aa5.07□□□□□ -1.6
COL16A1-204ENST00000440437 KRTAP5-2Q701N4 177 aa5.07□□□□□ -1.6
COL16A1-204ENST00000440437 ROMO1P60602 79 aa5.03□□□□□ -1.6
COL16A1-204ENST00000440437 KRTAP4-11Q9BYQ6 195 aa5.02□□□□□ -1.61
COL16A1-204ENST00000440437 KRTAP9-6A8MVA2 160 aa4.96□□□□□ -1.62
COL16A1-204ENST00000440437 KRTAP9-4Q9BYQ2 154 aa4.92□□□□□ -1.62
COL16A1-204ENST00000440437 KRTAP5-8O75690 187 aa4.87□□□□□ -1.63
COL16A1-204ENST00000440437 KRTAP6-2Q3LI66 62 aa4.85□□□□□ -1.63
COL16A1-204ENST00000440437 OBSCNQ5VST9 7968 aa4.71□□□□□ -1.65
COL16A1-204ENST00000440437 MUC5ACP98088 5654 aa4.66□□□□□ -1.66
COL16A1-204ENST00000440437 MUC5BQ9HC84 5762 aaPredicted RBP4.66□□□□□ -1.66
COL16A1-204ENST00000440437 MT3P25713 68 aa4.64□□□□□ -1.67
COL16A1-204ENST00000440437 AHNAKQ09666 5890 aaKnown RBP4.62□□□□□ -1.67
COL16A1-204ENST00000440437 BRK1Q8WUW1 75 aa4.61□□□□□ -1.67
COL16A1-204ENST00000440437 KRTAP9-9Q9BYP9 154 aa4.6□□□□□ -1.67
COL16A1-204ENST00000440437 KRTAP5-1Q6L8H4 278 aa4.57□□□□□ -1.68
COL16A1-204ENST00000440437 PMAIP1Q13794 54 aa4.35□□□□□ -1.71
COL16A1-204ENST00000440437 LCE1EQ5T753 118 aa4.31□□□□□ -1.72
COL16A1-204ENST00000440437 PRAC1Q96KF2 57 aa4.13□□□□□ -1.75
COL16A1-204ENST00000440437 KRTAP4-2Q9BYR5 136 aa4.11□□□□□ -1.75
COL16A1-204ENST00000440437 PRO0628Q9UI54 55 aa4.11□□□□□ -1.75
COL16A1-204ENST00000440437 LCE1BQ5T7P3 118 aa4.04□□□□□ -1.76
COL16A1-204ENST00000440437 LCE1CQ5T751 118 aa4□□□□□ -1.77
COL16A1-204ENST00000440437 KTN1-AS1Q86SY8 53 aa3.92□□□□□ -1.78
COL16A1-204ENST00000440437 KRTAP4-12Q9BQ66 201 aa3.73□□□□□ -1.81
COL16A1-204ENST00000440437 LCE3DQ9BYE3 92 aa3.72□□□□□ -1.81
COL16A1-204ENST00000440437 SVIPQ8NHG7 77 aa3.71□□□□□ -1.82
COL16A1-204ENST00000440437 KRTAP5-11Q6L8G4 156 aa3.66□□□□□ -1.82
COL16A1-204ENST00000440437 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.64□□□□□ -1.83
COL16A1-204ENST00000440437 LCE1FQ5T754 118 aa3.57□□□□□ -1.84
COL16A1-204ENST00000440437 LUZP6Q538Z0 58 aa3.54□□□□□ -1.84
COL16A1-204ENST00000440437 LCE3EQ5T5B0 92 aa3.48□□□□□ -1.85
COL16A1-204ENST00000440437 KRTAP21-2Q3LI59 83 aa3.35□□□□□ -1.87
COL16A1-204ENST00000440437 PHGR1C9JFL3 82 aa3.25□□□□□ -1.89
COL16A1-204ENST00000440437 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
COL16A1-204ENST00000440437 MUC19Q7Z5P9 8384 aa2.89□□□□□ -1.95
COL16A1-204ENST00000440437 NDUFAF8A1L188 74 aa2.86□□□□□ -1.95
COL16A1-204ENST00000440437 PRM1P04553 51 aa2.56□□□□□ -2
COL16A1-204ENST00000440437 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
COL16A1-204ENST00000440437 H3BS24 57 aa2.39□□□□□ -2.03
COL16A1-204ENST00000440437 INE1O15225 51 aa2.36□□□□□ -2.03
COL16A1-204ENST00000440437 A0A0A0MQY5 61 aa2.31□□□□□ -2.04
COL16A1-204ENST00000440437 MUC16Q8WXI7 14507 aa2.1□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 117.3 ms