RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 TMEM258P61165 79 aa5.85□□□□□ -1.47
COL16A1-204ENST00000440437 KRTAP4-3Q9BYR4 195 aa5.85□□□□□ -1.47
COL16A1-204ENST00000440437 HMCN1Q96RW7 5635 aa5.84□□□□□ -1.47
COL16A1-204ENST00000440437 PRR15LQ9BU68 103 aa5.82□□□□□ -1.48
COL16A1-204ENST00000440437 KRTAP5-4Q6L8H1 288 aa5.81□□□□□ -1.48
COL16A1-204ENST00000440437 LINC01558Q9Y6Z2 57 aa5.8□□□□□ -1.48
COL16A1-204ENST00000440437 KRTAP4-6Q9BYQ5 205 aa5.69□□□□□ -1.5
COL16A1-204ENST00000440437 KRTAP12-3P60328 96 aa5.68□□□□□ -1.5
COL16A1-204ENST00000440437 KRTAP4-7Q9BYR0 210 aa5.68□□□□□ -1.5
COL16A1-204ENST00000440437 AHNAK2Q8IVF2 5795 aa5.66□□□□□ -1.5
COL16A1-204ENST00000440437 UQCR11O14957 56 aa5.63□□□□□ -1.51
COL16A1-204ENST00000440437 KRTAP5-10Q6L8G5 202 aa5.61□□□□□ -1.51
COL16A1-204ENST00000440437 KRTAP5-5Q701N2 237 aaPredicted RBP5.54□□□□□ -1.52
COL16A1-204ENST00000440437 V9GYY9 64 aa5.54□□□□□ -1.52
COL16A1-204ENST00000440437 MIR22HGQ0VDD5 57 aa5.49□□□□□ -1.53
COL16A1-204ENST00000440437 Q1T7F1 81 aa5.49□□□□□ -1.53
COL16A1-204ENST00000440437 KRTAP25-1Q3LHN0 102 aa5.48□□□□□ -1.53
COL16A1-204ENST00000440437 KRTAP20-2Q3LI61 65 aa5.48□□□□□ -1.53
COL16A1-204ENST00000440437 KRTAP5-3Q6L8H2 238 aa5.45□□□□□ -1.54
COL16A1-204ENST00000440437 SPRR5A0A1B0GTR4 108 aa5.43□□□□□ -1.54
COL16A1-204ENST00000440437 PSPHP1O15172 72 aa5.42□□□□□ -1.54
COL16A1-204ENST00000440437 K7ERS5 55 aa5.4□□□□□ -1.54
COL16A1-204ENST00000440437 KRTAP5-7Q6L8G8 165 aa5.4□□□□□ -1.54
COL16A1-204ENST00000440437 LOC100996750A0A140TA64 210 aa5.39□□□□□ -1.55
COL16A1-204ENST00000440437 KRTAP12-4P60329 112 aa5.36□□□□□ -1.55
COL16A1-204ENST00000440437 KRTAP19-4Q3LI73 84 aa5.36□□□□□ -1.55
COL16A1-204ENST00000440437 RPS28P62857 69 aaKnown RBP5.31□□□□□ -1.56
COL16A1-204ENST00000440437 SYNE1Q8NF91 8797 aaKnown RBP5.31□□□□□ -1.56
COL16A1-204ENST00000440437 KRTAP23-1A1A580 65 aa5.29□□□□□ -1.56
COL16A1-204ENST00000440437 A6NED7 52 aa5.26□□□□□ -1.57
COL16A1-204ENST00000440437 PCP4P48539 62 aa5.26□□□□□ -1.57
COL16A1-204ENST00000440437 KRTAP15-1Q3LI76 137 aa5.26□□□□□ -1.57
COL16A1-204ENST00000440437 LCE3CQ5T5A8 94 aa5.22□□□□□ -1.57
COL16A1-204ENST00000440437 CDC42SE1Q9NRR8 79 aa5.11□□□□□ -1.59
COL16A1-204ENST00000440437 MT1AP04731 61 aa5.09□□□□□ -1.59
COL16A1-204ENST00000440437 KRTAP6-1Q3LI64 71 aa5.07□□□□□ -1.6
COL16A1-204ENST00000440437 KRTAP5-2Q701N4 177 aa5.07□□□□□ -1.6
COL16A1-204ENST00000440437 ROMO1P60602 79 aa5.03□□□□□ -1.6
COL16A1-204ENST00000440437 KRTAP4-11Q9BYQ6 195 aa5.02□□□□□ -1.61
COL16A1-204ENST00000440437 KRTAP9-6A8MVA2 160 aa4.96□□□□□ -1.62
COL16A1-204ENST00000440437 KRTAP9-4Q9BYQ2 154 aa4.92□□□□□ -1.62
COL16A1-204ENST00000440437 KRTAP5-8O75690 187 aa4.87□□□□□ -1.63
COL16A1-204ENST00000440437 KRTAP6-2Q3LI66 62 aa4.85□□□□□ -1.63
COL16A1-204ENST00000440437 OBSCNQ5VST9 7968 aa4.71□□□□□ -1.65
COL16A1-204ENST00000440437 MUC5ACP98088 5654 aa4.66□□□□□ -1.66
COL16A1-204ENST00000440437 MUC5BQ9HC84 5762 aaPredicted RBP4.66□□□□□ -1.66
COL16A1-204ENST00000440437 MT3P25713 68 aa4.64□□□□□ -1.67
COL16A1-204ENST00000440437 AHNAKQ09666 5890 aaKnown RBP4.62□□□□□ -1.67
COL16A1-204ENST00000440437 BRK1Q8WUW1 75 aa4.61□□□□□ -1.67
COL16A1-204ENST00000440437 KRTAP9-9Q9BYP9 154 aa4.6□□□□□ -1.67
COL16A1-204ENST00000440437 KRTAP5-1Q6L8H4 278 aa4.57□□□□□ -1.68
COL16A1-204ENST00000440437 PMAIP1Q13794 54 aa4.35□□□□□ -1.71
COL16A1-204ENST00000440437 LCE1EQ5T753 118 aa4.31□□□□□ -1.72
COL16A1-204ENST00000440437 PRAC1Q96KF2 57 aa4.13□□□□□ -1.75
COL16A1-204ENST00000440437 KRTAP4-2Q9BYR5 136 aa4.11□□□□□ -1.75
COL16A1-204ENST00000440437 PRO0628Q9UI54 55 aa4.11□□□□□ -1.75
COL16A1-204ENST00000440437 LCE1BQ5T7P3 118 aa4.04□□□□□ -1.76
COL16A1-204ENST00000440437 LCE1CQ5T751 118 aa4□□□□□ -1.77
COL16A1-204ENST00000440437 KTN1-AS1Q86SY8 53 aa3.92□□□□□ -1.78
COL16A1-204ENST00000440437 KRTAP4-12Q9BQ66 201 aa3.73□□□□□ -1.81
COL16A1-204ENST00000440437 LCE3DQ9BYE3 92 aa3.72□□□□□ -1.81
COL16A1-204ENST00000440437 SVIPQ8NHG7 77 aa3.71□□□□□ -1.82
COL16A1-204ENST00000440437 KRTAP5-11Q6L8G4 156 aa3.66□□□□□ -1.82
COL16A1-204ENST00000440437 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.64□□□□□ -1.83
COL16A1-204ENST00000440437 LCE1FQ5T754 118 aa3.57□□□□□ -1.84
COL16A1-204ENST00000440437 LUZP6Q538Z0 58 aa3.54□□□□□ -1.84
COL16A1-204ENST00000440437 LCE3EQ5T5B0 92 aa3.48□□□□□ -1.85
COL16A1-204ENST00000440437 KRTAP21-2Q3LI59 83 aa3.35□□□□□ -1.87
COL16A1-204ENST00000440437 PHGR1C9JFL3 82 aa3.25□□□□□ -1.89
COL16A1-204ENST00000440437 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
COL16A1-204ENST00000440437 MUC19Q7Z5P9 8384 aa2.89□□□□□ -1.95
COL16A1-204ENST00000440437 NDUFAF8A1L188 74 aa2.86□□□□□ -1.95
COL16A1-204ENST00000440437 PRM1P04553 51 aa2.56□□□□□ -2
COL16A1-204ENST00000440437 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
COL16A1-204ENST00000440437 H3BS24 57 aa2.39□□□□□ -2.03
COL16A1-204ENST00000440437 INE1O15225 51 aa2.36□□□□□ -2.03
COL16A1-204ENST00000440437 A0A0A0MQY5 61 aa2.31□□□□□ -2.04
COL16A1-204ENST00000440437 MUC16Q8WXI7 14507 aa2.1□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 66.4 ms