RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 LINC01558Q9Y6Z2 57 aa6.58□□□□□ -1.36
CCDC78-204ENST00000439619 MT4P47944 62 aa6.53□□□□□ -1.36
CCDC78-204ENST00000439619 UQCR11O14957 56 aa6.51□□□□□ -1.37
CCDC78-204ENST00000439619 TMEM258P61165 79 aa6.48□□□□□ -1.37
CCDC78-204ENST00000439619 KRTAP4-3Q9BYR4 195 aa6.46□□□□□ -1.38
CCDC78-204ENST00000439619 KRTAP12-3P60328 96 aa6.45□□□□□ -1.38
CCDC78-204ENST00000439619 HMCN1Q96RW7 5635 aa6.41□□□□□ -1.38
CCDC78-204ENST00000439619 KRTAP5-4Q6L8H1 288 aa6.4□□□□□ -1.38
CCDC78-204ENST00000439619 K7ERS5 55 aa6.34□□□□□ -1.39
CCDC78-204ENST00000439619 MIR22HGQ0VDD5 57 aa6.33□□□□□ -1.4
CCDC78-204ENST00000439619 KRTAP25-1Q3LHN0 102 aa6.32□□□□□ -1.4
CCDC78-204ENST00000439619 KRTAP4-7Q9BYR0 210 aa6.29□□□□□ -1.4
CCDC78-204ENST00000439619 KRTAP4-6Q9BYQ5 205 aa6.28□□□□□ -1.4
CCDC78-204ENST00000439619 V9GYY9 64 aa6.2□□□□□ -1.42
CCDC78-204ENST00000439619 KRTAP19-4Q3LI73 84 aa6.16□□□□□ -1.42
CCDC78-204ENST00000439619 KRTAP5-10Q6L8G5 202 aa6.15□□□□□ -1.42
CCDC78-204ENST00000439619 AHNAK2Q8IVF2 5795 aa6.13□□□□□ -1.43
CCDC78-204ENST00000439619 PSPHP1O15172 72 aa6.12□□□□□ -1.43
CCDC78-204ENST00000439619 KRTAP12-4P60329 112 aa6.09□□□□□ -1.43
CCDC78-204ENST00000439619 Q1T7F1 81 aa6.09□□□□□ -1.43
CCDC78-204ENST00000439619 KRTAP5-5Q701N2 237 aaPredicted RBP6.09□□□□□ -1.43
CCDC78-204ENST00000439619 SPRR5A0A1B0GTR4 108 aa6.07□□□□□ -1.44
CCDC78-204ENST00000439619 KRTAP23-1A1A580 65 aa6.07□□□□□ -1.44
CCDC78-204ENST00000439619 KRTAP20-2Q3LI61 65 aa6.07□□□□□ -1.44
CCDC78-204ENST00000439619 KRTAP5-3Q6L8H2 238 aa6.01□□□□□ -1.45
CCDC78-204ENST00000439619 KRTAP15-1Q3LI76 137 aa6□□□□□ -1.45
CCDC78-204ENST00000439619 LOC100996750A0A140TA64 210 aa5.97□□□□□ -1.45
CCDC78-204ENST00000439619 A6NED7 52 aa5.96□□□□□ -1.46
CCDC78-204ENST00000439619 KRTAP5-7Q6L8G8 165 aa5.94□□□□□ -1.46
CCDC78-204ENST00000439619 CDC42SE1Q9NRR8 79 aa5.93□□□□□ -1.46
CCDC78-204ENST00000439619 LCE3CQ5T5A8 94 aa5.92□□□□□ -1.46
CCDC78-204ENST00000439619 SYNE1Q8NF91 8797 aaKnown RBP5.83□□□□□ -1.48
CCDC78-204ENST00000439619 RPS28P62857 69 aaKnown RBP5.81□□□□□ -1.48
CCDC78-204ENST00000439619 ROMO1P60602 79 aa5.79□□□□□ -1.48
CCDC78-204ENST00000439619 PCP4P48539 62 aa5.76□□□□□ -1.49
CCDC78-204ENST00000439619 MT1AP04731 61 aa5.69□□□□□ -1.5
CCDC78-204ENST00000439619 KRTAP6-1Q3LI64 71 aa5.63□□□□□ -1.51
CCDC78-204ENST00000439619 KRTAP5-2Q701N4 177 aa5.58□□□□□ -1.52
CCDC78-204ENST00000439619 KRTAP4-11Q9BYQ6 195 aa5.58□□□□□ -1.52
CCDC78-204ENST00000439619 KRTAP9-4Q9BYQ2 154 aa5.52□□□□□ -1.53
CCDC78-204ENST00000439619 KRTAP9-6A8MVA2 160 aa5.49□□□□□ -1.53
CCDC78-204ENST00000439619 KRTAP6-2Q3LI66 62 aa5.43□□□□□ -1.54
CCDC78-204ENST00000439619 KRTAP5-8O75690 187 aa5.36□□□□□ -1.55
CCDC78-204ENST00000439619 MT3P25713 68 aa5.26□□□□□ -1.57
CCDC78-204ENST00000439619 OBSCNQ5VST9 7968 aa5.25□□□□□ -1.57
CCDC78-204ENST00000439619 KRTAP9-9Q9BYP9 154 aa5.19□□□□□ -1.58
CCDC78-204ENST00000439619 MUC5ACP98088 5654 aa5.14□□□□□ -1.59
CCDC78-204ENST00000439619 AHNAKQ09666 5890 aaKnown RBP5.08□□□□□ -1.6
CCDC78-204ENST00000439619 MUC5BQ9HC84 5762 aaPredicted RBP5.08□□□□□ -1.6
CCDC78-204ENST00000439619 BRK1Q8WUW1 75 aa5.07□□□□□ -1.6
CCDC78-204ENST00000439619 KRTAP5-1Q6L8H4 278 aa5.02□□□□□ -1.61
CCDC78-204ENST00000439619 LCE1EQ5T753 118 aa4.84□□□□□ -1.63
CCDC78-204ENST00000439619 PMAIP1Q13794 54 aa4.76□□□□□ -1.65
CCDC78-204ENST00000439619 PRAC1Q96KF2 57 aa4.61□□□□□ -1.67
CCDC78-204ENST00000439619 LCE1BQ5T7P3 118 aa4.57□□□□□ -1.68
CCDC78-204ENST00000439619 KRTAP4-2Q9BYR5 136 aa4.51□□□□□ -1.69
CCDC78-204ENST00000439619 LCE1CQ5T751 118 aa4.48□□□□□ -1.69
CCDC78-204ENST00000439619 PRO0628Q9UI54 55 aa4.45□□□□□ -1.7
CCDC78-204ENST00000439619 LCE3DQ9BYE3 92 aa4.27□□□□□ -1.73
CCDC78-204ENST00000439619 KTN1-AS1Q86SY8 53 aa4.26□□□□□ -1.73
CCDC78-204ENST00000439619 KRTAP4-12Q9BQ66 201 aa4.13□□□□□ -1.75
CCDC78-204ENST00000439619 KRTAP5-11Q6L8G4 156 aa4.05□□□□□ -1.76
CCDC78-204ENST00000439619 SVIPQ8NHG7 77 aa4.05□□□□□ -1.76
CCDC78-204ENST00000439619 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.04□□□□□ -1.76
CCDC78-204ENST00000439619 LCE1FQ5T754 118 aa4.01□□□□□ -1.77
CCDC78-204ENST00000439619 LCE3EQ5T5B0 92 aa4□□□□□ -1.77
CCDC78-204ENST00000439619 LUZP6Q538Z0 58 aa3.95□□□□□ -1.78
CCDC78-204ENST00000439619 KRTAP21-2Q3LI59 83 aa3.7□□□□□ -1.82
CCDC78-204ENST00000439619 PHGR1C9JFL3 82 aa3.63□□□□□ -1.83
CCDC78-204ENST00000439619 KRTAP4-4Q9BYR3 166 aa3.4□□□□□ -1.87
CCDC78-204ENST00000439619 MUC19Q7Z5P9 8384 aa3.23□□□□□ -1.89
CCDC78-204ENST00000439619 NDUFAF8A1L188 74 aa3.1□□□□□ -1.91
CCDC78-204ENST00000439619 PRM1P04553 51 aa2.92□□□□□ -1.94
CCDC78-204ENST00000439619 KRTAP21-1Q3LI58 79 aa2.78□□□□□ -1.96
CCDC78-204ENST00000439619 INE1O15225 51 aa2.5□□□□□ -2.01
CCDC78-204ENST00000439619 A0A0A0MQY5 61 aa2.41□□□□□ -2.02
CCDC78-204ENST00000439619 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
CCDC78-204ENST00000439619 H3BS24 57 aa1.95□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 64.4 ms