RNA–Protein interactions for RNA: ENST00000439049.5

SORBS2-223, Transcript of sorbin and SH3 domain containing 2, human

TSL 4

Gene SORBS2, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS2-223	ENST00000439049	DYNC1H1	Q14204	4646 aa	Known RBP	0.85	□□□□□ -2.27
SORBS2-223	ENST00000439049	TNXB	P22105	4242 aa		0.85	□□□□□ -2.27
SORBS2-223	ENST00000439049		Q5VV11	94 aa		0.85	□□□□□ -2.27
SORBS2-223	ENST00000439049	HSPG2	P98160	4391 aa		0.84	□□□□□ -2.27
SORBS2-223	ENST00000439049	RYR1	P21817	5038 aa		0.83	□□□□□ -2.28
SORBS2-223	ENST00000439049	RYR3	Q15413	4870 aa		0.83	□□□□□ -2.28
SORBS2-223	ENST00000439049	FAT3	Q8TDW7	4589 aa		0.82	□□□□□ -2.28
SORBS2-223	ENST00000439049	FAT1	Q14517	4588 aa		0.82	□□□□□ -2.28
SORBS2-223	ENST00000439049	MYCBP2	O75592	4640 aa		0.81	□□□□□ -2.28
SORBS2-223	ENST00000439049	KRTAP21-1	Q3LI58	79 aa		0.8	□□□□□ -2.28
SORBS2-223	ENST00000439049	LRP1	Q07954	4544 aa	Known RBP	0.79	□□□□□ -2.28
SORBS2-223	ENST00000439049	EPPK1	P58107	5090 aa	Known RBP	0.79	□□□□□ -2.28
SORBS2-223	ENST00000439049		M0R2T5	61 aa		0.79	□□□□□ -2.28
SORBS2-223	ENST00000439049	KRTAP2-3	P0C7H8	128 aa		0.79	□□□□□ -2.28
SORBS2-223	ENST00000439049	KRTAP2-4	Q9BYR9	128 aa		0.79	□□□□□ -2.28
SORBS2-223	ENST00000439049	KRTAP2-1	Q9BYU5	128 aa		0.79	□□□□□ -2.28
SORBS2-223	ENST00000439049	ABCA13	Q86UQ4	5058 aa		0.78	□□□□□ -2.28
SORBS2-223	ENST00000439049	KIAA1109	Q2LD37	5005 aa		0.78	□□□□□ -2.29
SORBS2-223	ENST00000439049	BIRC6	Q9NR09	4857 aa		0.77	□□□□□ -2.29
SORBS2-223	ENST00000439049	DMBT1	Q9UGM3	2413 aa	Predicted RBP	0.77	□□□□□ -2.29
SORBS2-223	ENST00000439049	HERC2	O95714	4834 aa		0.77	□□□□□ -2.29
SORBS2-223	ENST00000439049	MUC17	Q685J3	4493 aa		0.77	□□□□□ -2.29
SORBS2-223	ENST00000439049	FLG	P20930	4061 aa	Predicted RBP	0.76	□□□□□ -2.29
SORBS2-223	ENST00000439049	TNP1	P09430	55 aa		0.76	□□□□□ -2.29
SORBS2-223	ENST00000439049	LPA	P08519	4548 aa		0.75	□□□□□ -2.29
SORBS2-223	ENST00000439049	LRP2	P98164	4655 aa		0.75	□□□□□ -2.29
SORBS2-223	ENST00000439049	SPRR2G	Q9BYE4	73 aa		0.75	□□□□□ -2.29
SORBS2-223	ENST00000439049	MUC2	Q02817	5179 aa		0.75	□□□□□ -2.29
SORBS2-223	ENST00000439049	PCLO	Q9Y6V0	5065 aa		0.75	□□□□□ -2.29
SORBS2-223	ENST00000439049	KRTAP19-2	Q3LHN2	52 aa		0.74	□□□□□ -2.29
SORBS2-223	ENST00000439049	MT1H	P80294	61 aa		0.73	□□□□□ -2.29
SORBS2-223	ENST00000439049	HMCN2	Q8NDA2	5059 aa		0.73	□□□□□ -2.29
SORBS2-223	ENST00000439049	HERC1	Q15751	4861 aa		0.72	□□□□□ -2.29
SORBS2-223	ENST00000439049	KRTAP19-8	Q3LI54	63 aa		0.72	□□□□□ -2.29
SORBS2-223	ENST00000439049	MT2A	P02795	61 aa		0.7	□□□□□ -2.3
SORBS2-223	ENST00000439049	RNF213	Q63HN8	5207 aa		0.69	□□□□□ -2.3
SORBS2-223	ENST00000439049	MT1F	P04733	61 aa		0.68	□□□□□ -2.3
SORBS2-223	ENST00000439049	UBR4	Q5T4S7	5183 aa		0.68	□□□□□ -2.3
SORBS2-223	ENST00000439049	AHNAK2	Q8IVF2	5795 aa		0.68	□□□□□ -2.3
SORBS2-223	ENST00000439049	KRTAP8-1	Q8IUC2	63 aa		0.67	□□□□□ -2.3
SORBS2-223	ENST00000439049	FAT4	Q6V0I7	4981 aa		0.66	□□□□□ -2.3
SORBS2-223	ENST00000439049	PHGR1	C9JFL3	82 aa		0.65	□□□□□ -2.31
SORBS2-223	ENST00000439049	MT1B	P07438	61 aa		0.65	□□□□□ -2.31
SORBS2-223	ENST00000439049	KRTAP19-6	Q3LI70	58 aa		0.65	□□□□□ -2.31
SORBS2-223	ENST00000439049	MT1X	P80297	61 aa		0.64	□□□□□ -2.31
SORBS2-223	ENST00000439049	MT1E	P04732	61 aa		0.6	□□□□□ -2.31
SORBS2-223	ENST00000439049	MT1G	P13640	62 aa		0.6	□□□□□ -2.31
SORBS2-223	ENST00000439049	MT1L	Q93083	61 aa		0.6	□□□□□ -2.31
SORBS2-223	ENST00000439049	KRTAP19-5	Q3LI72	72 aa		0.59	□□□□□ -2.31
SORBS2-223	ENST00000439049	USH2A	O75445	5202 aa		0.58	□□□□□ -2.32
SORBS2-223	ENST00000439049	SSPO	A2VEC9	5147 aa		0.57	□□□□□ -2.32
SORBS2-223	ENST00000439049	KRTAP19-7	Q3SYF9	63 aa		0.57	□□□□□ -2.32
SORBS2-223	ENST00000439049	MT1M	Q8N339	61 aa		0.57	□□□□□ -2.32
SORBS2-223	ENST00000439049	SPRR2F	Q96RM1	72 aa		0.56	□□□□□ -2.32
SORBS2-223	ENST00000439049	FSIP2	Q5CZC0	6907 aa		0.54	□□□□□ -2.32
SORBS2-223	ENST00000439049	KMT2D	O14686	5537 aa		0.53	□□□□□ -2.32
SORBS2-223	ENST00000439049	MT1A	P04731	61 aa		0.53	□□□□□ -2.32
SORBS2-223	ENST00000439049	SPRR2E	P22531	72 aa		0.53	□□□□□ -2.32
SORBS2-223	ENST00000439049	SPRR2B	P35325	72 aa		0.53	□□□□□ -2.32
SORBS2-223	ENST00000439049	SPRR2A	P35326	72 aa		0.53	□□□□□ -2.32
SORBS2-223	ENST00000439049	SPRR2D	P22532	72 aa		0.52	□□□□□ -2.33
SORBS2-223	ENST00000439049	MACF1	Q9UPN3	7388 aa	Known RBP	0.52	□□□□□ -2.33
SORBS2-223	ENST00000439049	MDN1	Q9NU22	5596 aa		0.52	□□□□□ -2.33
SORBS2-223	ENST00000439049	AHNAK	Q09666	5890 aa	Known RBP	0.51	□□□□□ -2.33
SORBS2-223	ENST00000439049	MUC12	Q9UKN1	5478 aa		0.48	□□□□□ -2.33
SORBS2-223	ENST00000439049	SYNE2	Q8WXH0	6885 aa	Known RBP	0.48	□□□□□ -2.33
SORBS2-223	ENST00000439049	DST	Q03001	7570 aa	Known RBP	0.47	□□□□□ -2.33
SORBS2-223	ENST00000439049	KRTAP20-1	Q3LI63	56 aa		0.46	□□□□□ -2.34
SORBS2-223	ENST00000439049	KRTAP6-1	Q3LI64	71 aa		0.45	□□□□□ -2.34
SORBS2-223	ENST00000439049	KRTAP20-2	Q3LI61	65 aa		0.43	□□□□□ -2.34
SORBS2-223	ENST00000439049	KRTAP6-2	Q3LI66	62 aa		0.43	□□□□□ -2.34
SORBS2-223	ENST00000439049	NEB	P20929	6669 aa		0.42	□□□□□ -2.34
SORBS2-223	ENST00000439049	MT4	P47944	62 aa		0.41	□□□□□ -2.34
SORBS2-223	ENST00000439049	MUC5B	Q9HC84	5762 aa	Predicted RBP	0.4	□□□□□ -2.35
SORBS2-223	ENST00000439049	SYNE1	Q8NF91	8797 aa	Known RBP	0.4	□□□□□ -2.35
SORBS2-223	ENST00000439049	PRM1	P04553	51 aa		0.37	□□□□□ -2.35
SORBS2-223	ENST00000439049	MUC5AC	P98088	5654 aa		0.35	□□□□□ -2.35
SORBS2-223	ENST00000439049	GPR98	Q8WXG9	6306 aa		0.28	□□□□□ -2.37

Retrieved 78 of 20,778 RNA–protein pairs in 6.7 ms