RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 HTN3P15516 51 aa0.61□□□□□ -2.31
LSM1P1-201ENST00000438629 SPRR2DP22532 72 aa0.61□□□□□ -2.31
LSM1P1-201ENST00000438629 HYDINQ4G0P3 5121 aa0.61□□□□□ -2.31
LSM1P1-201ENST00000438629 MAP1AP78559 2803 aaPredicted RBP0.6□□□□□ -2.31
LSM1P1-201ENST00000438629 HIVEP1P15822 2718 aa0.6□□□□□ -2.31
LSM1P1-201ENST00000438629 LRBAP50851 2863 aa0.6□□□□□ -2.31
LSM1P1-201ENST00000438629 NBEAL2Q6ZNJ1 2754 aa0.6□□□□□ -2.31
LSM1P1-201ENST00000438629 TLN2Q9Y4G6 2542 aa0.6□□□□□ -2.31
LSM1P1-201ENST00000438629 SPRR2BP35325 72 aa0.6□□□□□ -2.31
LSM1P1-201ENST00000438629 SVEP1Q4LDE5 3571 aa0.6□□□□□ -2.31
LSM1P1-201ENST00000438629 RYR1P21817 5038 aa0.6□□□□□ -2.31
LSM1P1-201ENST00000438629 ZANQ9Y493 2812 aa0.6□□□□□ -2.31
LSM1P1-201ENST00000438629 HERC2O95714 4834 aa0.59□□□□□ -2.31
LSM1P1-201ENST00000438629 MGAM2Q2M2H8 2515 aa0.59□□□□□ -2.31
LSM1P1-201ENST00000438629 MT1AP04731 61 aa0.59□□□□□ -2.31
LSM1P1-201ENST00000438629 KRTAP6-2Q3LI66 62 aa0.59□□□□□ -2.31
LSM1P1-201ENST00000438629 LRP1BQ9NZR2 4599 aa0.59□□□□□ -2.32
LSM1P1-201ENST00000438629 PKD1L1Q8TDX9 2849 aa0.59□□□□□ -2.32
LSM1P1-201ENST00000438629 HRNRQ86YZ3 2850 aaPredicted RBP0.58□□□□□ -2.32
LSM1P1-201ENST00000438629 PCLOQ9Y6V0 5065 aa0.58□□□□□ -2.32
LSM1P1-201ENST00000438629 CENPEQ02224 2701 aa0.58□□□□□ -2.32
LSM1P1-201ENST00000438629 CD52P31358 61 aa0.58□□□□□ -2.32
LSM1P1-201ENST00000438629 FLNAP21333 2647 aaKnown RBP0.58□□□□□ -2.32
LSM1P1-201ENST00000438629 ABCA13Q86UQ4 5058 aa0.58□□□□□ -2.32
LSM1P1-201ENST00000438629 TGP01266 2768 aa0.57□□□□□ -2.32
LSM1P1-201ENST00000438629 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
LSM1P1-201ENST00000438629 MUC17Q685J3 4493 aa0.57□□□□□ -2.32
LSM1P1-201ENST00000438629 VPS13CQ709C8 3753 aa0.57□□□□□ -2.32
LSM1P1-201ENST00000438629 NBEAL1Q6ZS30 2694 aa0.56□□□□□ -2.32
LSM1P1-201ENST00000438629 SPRR2AP35326 72 aa0.56□□□□□ -2.32
LSM1P1-201ENST00000438629 KIAA1109Q2LD37 5005 aa0.56□□□□□ -2.32
LSM1P1-201ENST00000438629 STARD9Q9P2P6 4700 aa0.56□□□□□ -2.32
LSM1P1-201ENST00000438629 MUC5BQ9HC84 5762 aaPredicted RBP0.55□□□□□ -2.32
LSM1P1-201ENST00000438629 MXRA5Q9NR99 2828 aa0.55□□□□□ -2.32
LSM1P1-201ENST00000438629 DEFB4AO15263 64 aa0.55□□□□□ -2.32
LSM1P1-201ENST00000438629 HERC1Q15751 4861 aa0.55□□□□□ -2.32
LSM1P1-201ENST00000438629 SPRR2FQ96RM1 72 aa0.54□□□□□ -2.32
LSM1P1-201ENST00000438629 UBR4Q5T4S7 5183 aa0.53□□□□□ -2.32
LSM1P1-201ENST00000438629 SPRR2EP22531 72 aa0.51□□□□□ -2.33
LSM1P1-201ENST00000438629 STAB2Q8WWQ8 2551 aa0.51□□□□□ -2.33
LSM1P1-201ENST00000438629 HMCN2Q8NDA2 5059 aa0.49□□□□□ -2.33
LSM1P1-201ENST00000438629 LRP2P98164 4655 aa0.48□□□□□ -2.33
LSM1P1-201ENST00000438629 FAT4Q6V0I7 4981 aa0.48□□□□□ -2.33
LSM1P1-201ENST00000438629 MT1EP04732 61 aa0.45□□□□□ -2.34
LSM1P1-201ENST00000438629 MUC5ACP98088 5654 aa0.44□□□□□ -2.34
LSM1P1-201ENST00000438629 MUC2Q02817 5179 aa0.44□□□□□ -2.34
LSM1P1-201ENST00000438629 RNF213Q63HN8 5207 aa0.42□□□□□ -2.34
LSM1P1-201ENST00000438629 MT1LQ93083 61 aa0.42□□□□□ -2.34
LSM1P1-201ENST00000438629 USH2AO75445 5202 aa0.42□□□□□ -2.34
LSM1P1-201ENST00000438629 MT1HP80294 61 aa0.41□□□□□ -2.34
LSM1P1-201ENST00000438629 SPRR2GQ9BYE4 73 aa0.41□□□□□ -2.34
LSM1P1-201ENST00000438629 SSPOA2VEC9 5147 aa0.4□□□□□ -2.34
LSM1P1-201ENST00000438629 FSIP2Q5CZC0 6907 aa0.4□□□□□ -2.35
LSM1P1-201ENST00000438629 MDN1Q9NU22 5596 aa0.39□□□□□ -2.35
LSM1P1-201ENST00000438629 PHGR1C9JFL3 82 aa0.38□□□□□ -2.35
LSM1P1-201ENST00000438629 MT1XP80297 61 aa0.37□□□□□ -2.35
LSM1P1-201ENST00000438629 MT1HL1P0DM35 61 aa0.35□□□□□ -2.35
LSM1P1-201ENST00000438629 KRTAP19-8Q3LI54 63 aa0.34□□□□□ -2.36
LSM1P1-201ENST00000438629 KMT2DO14686 5537 aa0.34□□□□□ -2.36
LSM1P1-201ENST00000438629 MACF1Q9UPN3 7388 aaKnown RBP0.34□□□□□ -2.36
LSM1P1-201ENST00000438629 MUC12Q9UKN1 5478 aa0.34□□□□□ -2.36
LSM1P1-201ENST00000438629 SYNE2Q8WXH0 6885 aaKnown RBP0.33□□□□□ -2.36
LSM1P1-201ENST00000438629 MT1GP13640 62 aa0.33□□□□□ -2.36
LSM1P1-201ENST00000438629 NEBP20929 6669 aa0.33□□□□□ -2.36
LSM1P1-201ENST00000438629 KRTAP19-2Q3LHN2 52 aa0.32□□□□□ -2.36
LSM1P1-201ENST00000438629 KRTAP20-1Q3LI63 56 aa0.32□□□□□ -2.36
LSM1P1-201ENST00000438629 KRTAP19-7Q3SYF9 63 aa0.32□□□□□ -2.36
LSM1P1-201ENST00000438629 GPR98Q8WXG9 6306 aa0.32□□□□□ -2.36
LSM1P1-201ENST00000438629 KRTAP6-1Q3LI64 71 aa0.29□□□□□ -2.36
LSM1P1-201ENST00000438629 MT1FP04733 61 aa0.28□□□□□ -2.36
LSM1P1-201ENST00000438629 MT2AP02795 61 aa0.27□□□□□ -2.37
LSM1P1-201ENST00000438629 MT1BP07438 61 aa0.27□□□□□ -2.37
LSM1P1-201ENST00000438629 KRTAP19-6Q3LI70 58 aa0.27□□□□□ -2.37
LSM1P1-201ENST00000438629 MT1MQ8N339 61 aa0.25□□□□□ -2.37
LSM1P1-201ENST00000438629 MT4P47944 62 aa0.23□□□□□ -2.37
LSM1P1-201ENST00000438629 DSTQ03001 7570 aaKnown RBP0.21□□□□□ -2.38
LSM1P1-201ENST00000438629 KRTAP20-2Q3LI61 65 aa0.2□□□□□ -2.38
Retrieved 77 of 20,778 RNA–protein pairs in 96.6 ms