RNA–Protein interactions for RNA: ENST00000438180.1

GSE1-206, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 1 (best)

Gene GSE1, Length 1,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-206ENST00000438180 A0A0A0MQY5 61 aa5.83□□□□□ -1.48
GSE1-206ENST00000438180 MACF1Q9UPN3 7388 aaKnown RBP5.81□□□□□ -1.48
GSE1-206ENST00000438180 KRTAP19-3Q7Z4W3 81 aa5.8□□□□□ -1.48
GSE1-206ENST00000438180 MT1GP13640 62 aa5.78□□□□□ -1.48
GSE1-206ENST00000438180 KRTAP5-9P26371 169 aa5.73□□□□□ -1.49
GSE1-206ENST00000438180 KRTAP4-7Q9BYR0 210 aa5.71□□□□□ -1.49
GSE1-206ENST00000438180 MUC12Q9UKN1 5478 aa5.69□□□□□ -1.5
GSE1-206ENST00000438180 MT1MQ8N339 61 aa5.68□□□□□ -1.5
GSE1-206ENST00000438180 LCE5AQ5TCM9 118 aa5.67□□□□□ -1.5
GSE1-206ENST00000438180 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.62□□□□□ -1.51
GSE1-206ENST00000438180 KRTAP9-7A8MTY7 169 aa5.59□□□□□ -1.51
GSE1-206ENST00000438180 KRTAP9-6A8MVA2 160 aa5.59□□□□□ -1.51
GSE1-206ENST00000438180 KRTAP6-3Q3LI67 103 aa5.57□□□□□ -1.52
GSE1-206ENST00000438180 SYNE2Q8WXH0 6885 aaKnown RBP5.57□□□□□ -1.52
GSE1-206ENST00000438180 LCE1AQ5T7P2 110 aa5.55□□□□□ -1.52
GSE1-206ENST00000438180 LOC100996750A0A140TA64 210 aa5.54□□□□□ -1.52
GSE1-206ENST00000438180 KRTAP4-6Q9BYQ5 205 aa5.54□□□□□ -1.52
GSE1-206ENST00000438180 KRTAP4-3Q9BYR4 195 aa5.52□□□□□ -1.53
GSE1-206ENST00000438180 SPRR2EP22531 72 aa5.51□□□□□ -1.53
GSE1-206ENST00000438180 SPRR2BP35325 72 aa5.51□□□□□ -1.53
GSE1-206ENST00000438180 SPRR2AP35326 72 aa5.51□□□□□ -1.53
GSE1-206ENST00000438180 MDN1Q9NU22 5596 aa5.44□□□□□ -1.54
GSE1-206ENST00000438180 INE1O15225 51 aa5.34□□□□□ -1.56
GSE1-206ENST00000438180 SPRR2DP22532 72 aa5.31□□□□□ -1.56
GSE1-206ENST00000438180 KRTAP2-3P0C7H8 128 aa5.28□□□□□ -1.56
GSE1-206ENST00000438180 KRTAP2-4Q9BYR9 128 aa5.28□□□□□ -1.56
GSE1-206ENST00000438180 KRTAP2-1Q9BYU5 128 aa5.28□□□□□ -1.56
GSE1-206ENST00000438180 DSTQ03001 7570 aaKnown RBP5.2□□□□□ -1.58
GSE1-206ENST00000438180 KRTAP5-5Q701N2 237 aaPredicted RBP5.1□□□□□ -1.59
GSE1-206ENST00000438180 LCE3BQ5TA77 95 aa5.09□□□□□ -1.6
GSE1-206ENST00000438180 NEBP20929 6669 aa5.07□□□□□ -1.6
GSE1-206ENST00000438180 MT1AP04731 61 aa5.07□□□□□ -1.6
GSE1-206ENST00000438180 KRTAP6-1Q3LI64 71 aa4.99□□□□□ -1.61
GSE1-206ENST00000438180 KRTAP20-1Q3LI63 56 aa4.89□□□□□ -1.63
GSE1-206ENST00000438180 KRTAP4-12Q9BQ66 201 aa4.86□□□□□ -1.63
GSE1-206ENST00000438180 KRTAP5-4Q6L8H1 288 aa4.81□□□□□ -1.64
GSE1-206ENST00000438180 KRTAP9-4Q9BYQ2 154 aa4.8□□□□□ -1.64
GSE1-206ENST00000438180 KRTAP12-4P60329 112 aa4.77□□□□□ -1.65
GSE1-206ENST00000438180 KRTAP2-2Q9BYT5 123 aa4.76□□□□□ -1.65
GSE1-206ENST00000438180 KRTAP9-9Q9BYP9 154 aa4.75□□□□□ -1.65
GSE1-206ENST00000438180 LCE4AQ5TA78 99 aa4.74□□□□□ -1.65
GSE1-206ENST00000438180 SYNE1Q8NF91 8797 aaKnown RBP4.7□□□□□ -1.66
GSE1-206ENST00000438180 MT3P25713 68 aa4.61□□□□□ -1.67
GSE1-206ENST00000438180 KRTAP6-2Q3LI66 62 aa4.58□□□□□ -1.68
GSE1-206ENST00000438180 KRTAP4-9Q9BYQ8 210 aa4.58□□□□□ -1.68
GSE1-206ENST00000438180 MT4P47944 62 aa4.58□□□□□ -1.68
GSE1-206ENST00000438180 LCE3DQ9BYE3 92 aa4.53□□□□□ -1.68
GSE1-206ENST00000438180 LCE1DQ5T752 114 aa4.52□□□□□ -1.69
GSE1-206ENST00000438180 KRTAP20-2Q3LI61 65 aa4.49□□□□□ -1.69
GSE1-206ENST00000438180 LCE3EQ5T5B0 92 aa4.42□□□□□ -1.7
GSE1-206ENST00000438180 HMCN1Q96RW7 5635 aa4.39□□□□□ -1.71
GSE1-206ENST00000438180 KRTAP5-2Q701N4 177 aa4.39□□□□□ -1.71
GSE1-206ENST00000438180 KRTAP4-2Q9BYR5 136 aa4.32□□□□□ -1.72
GSE1-206ENST00000438180 GPR98Q8WXG9 6306 aa4.31□□□□□ -1.72
GSE1-206ENST00000438180 KRTAP5-3Q6L8H2 238 aa4.31□□□□□ -1.72
GSE1-206ENST00000438180 KRTAP4-11Q9BYQ6 195 aa4.24□□□□□ -1.73
GSE1-206ENST00000438180 OBSCNQ5VST9 7968 aa4.07□□□□□ -1.76
GSE1-206ENST00000438180 LCE1EQ5T753 118 aa3.98□□□□□ -1.77
GSE1-206ENST00000438180 PRM1P04553 51 aa3.9□□□□□ -1.79
GSE1-206ENST00000438180 AHNAK2Q8IVF2 5795 aa3.87□□□□□ -1.79
GSE1-206ENST00000438180 KRTAP5-10Q6L8G5 202 aa3.83□□□□□ -1.8
GSE1-206ENST00000438180 KRTAP5-1Q6L8H4 278 aa3.76□□□□□ -1.81
GSE1-206ENST00000438180 KRTAP5-7Q6L8G8 165 aa3.75□□□□□ -1.81
GSE1-206ENST00000438180 KRTAP5-8O75690 187 aa3.7□□□□□ -1.82
GSE1-206ENST00000438180 LCE1CQ5T751 118 aa3.7□□□□□ -1.82
GSE1-206ENST00000438180 LCE1BQ5T7P3 118 aa3.7□□□□□ -1.82
GSE1-206ENST00000438180 MUC5ACP98088 5654 aa3.67□□□□□ -1.82
GSE1-206ENST00000438180 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.47□□□□□ -1.85
GSE1-206ENST00000438180 AHNAKQ09666 5890 aaKnown RBP3.33□□□□□ -1.88
GSE1-206ENST00000438180 KRTAP21-2Q3LI59 83 aa3.26□□□□□ -1.89
GSE1-206ENST00000438180 MUC5BQ9HC84 5762 aaPredicted RBP3.26□□□□□ -1.89
GSE1-206ENST00000438180 KRTAP5-11Q6L8G4 156 aa3.25□□□□□ -1.89
GSE1-206ENST00000438180 LCE1FQ5T754 118 aa2.93□□□□□ -1.94
GSE1-206ENST00000438180 KRTAP4-4Q9BYR3 166 aa2.86□□□□□ -1.95
GSE1-206ENST00000438180 PHGR1C9JFL3 82 aa2.78□□□□□ -1.96
GSE1-206ENST00000438180 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
GSE1-206ENST00000438180 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
GSE1-206ENST00000438180 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 328.8 ms