RNA–Protein interactions for RNA: ENST00000437845.6

RBM17-204, Transcript of RNA binding motif protein 17, human

TSL 3

Gene RBM17, Length 833 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM17-204	ENST00000437845	KRTAP4-9	Q9BYQ8	210 aa		6.55	□□□□□ -1.36
RBM17-204	ENST00000437845		H3BS24	57 aa		6.45	□□□□□ -1.38
RBM17-204	ENST00000437845	KRTAP4-3	Q9BYR4	195 aa		6.45	□□□□□ -1.38
RBM17-204	ENST00000437845	GPR98	Q8WXG9	6306 aa		6.44	□□□□□ -1.38
RBM17-204	ENST00000437845	SVIP	Q8NHG7	77 aa		6.43	□□□□□ -1.38
RBM17-204	ENST00000437845	KRTAP12-3	P60328	96 aa		6.42	□□□□□ -1.38
RBM17-204	ENST00000437845	MIR22HG	Q0VDD5	57 aa		6.42	□□□□□ -1.38
RBM17-204	ENST00000437845	LCE1D	Q5T752	114 aa		6.41	□□□□□ -1.38
RBM17-204	ENST00000437845	LCE4A	Q5TA78	99 aa		6.41	□□□□□ -1.38
RBM17-204	ENST00000437845	HMCN1	Q96RW7	5635 aa		6.34	□□□□□ -1.4
RBM17-204	ENST00000437845	MT4	P47944	62 aa		6.33	□□□□□ -1.4
RBM17-204	ENST00000437845	KRTAP25-1	Q3LHN0	102 aa		6.33	□□□□□ -1.4
RBM17-204	ENST00000437845		V9GYY9	64 aa		6.32	□□□□□ -1.4
RBM17-204	ENST00000437845		K7ERS5	55 aa		6.31	□□□□□ -1.4
RBM17-204	ENST00000437845	PSPHP1	O15172	72 aa		6.3	□□□□□ -1.4
RBM17-204	ENST00000437845	KRTAP4-7	Q9BYR0	210 aa		6.3	□□□□□ -1.4
RBM17-204	ENST00000437845	KRTAP5-4	Q6L8H1	288 aa		6.29	□□□□□ -1.4
RBM17-204	ENST00000437845		Q1T7F1	81 aa		6.27	□□□□□ -1.41
RBM17-204	ENST00000437845	KRTAP4-6	Q9BYQ5	205 aa		6.16	□□□□□ -1.42
RBM17-204	ENST00000437845	LOC100996750	A0A140TA64	210 aa		6.11	□□□□□ -1.43
RBM17-204	ENST00000437845	AHNAK2	Q8IVF2	5795 aa		6.09	□□□□□ -1.44
RBM17-204	ENST00000437845	KRTAP23-1	A1A580	65 aa		6.08	□□□□□ -1.44
RBM17-204	ENST00000437845		A6NED7	52 aa		6.08	□□□□□ -1.44
RBM17-204	ENST00000437845	KRTAP19-4	Q3LI73	84 aa		6.06	□□□□□ -1.44
RBM17-204	ENST00000437845	KRTAP5-5	Q701N2	237 aa	Predicted RBP	6.05	□□□□□ -1.44
RBM17-204	ENST00000437845	KRTAP15-1	Q3LI76	137 aa		6	□□□□□ -1.45
RBM17-204	ENST00000437845	CDC42SE1	Q9NRR8	79 aa		5.97	□□□□□ -1.45
RBM17-204	ENST00000437845	KRTAP5-10	Q6L8G5	202 aa		5.95	□□□□□ -1.46
RBM17-204	ENST00000437845	KRTAP20-2	Q3LI61	65 aa		5.94	□□□□□ -1.46
RBM17-204	ENST00000437845	SPRR5	A0A1B0GTR4	108 aa		5.92	□□□□□ -1.46
RBM17-204	ENST00000437845	RPS28	P62857	69 aa	Known RBP	5.92	□□□□□ -1.46
RBM17-204	ENST00000437845	LCE3C	Q5T5A8	94 aa		5.91	□□□□□ -1.46
RBM17-204	ENST00000437845	KRTAP12-4	P60329	112 aa		5.9	□□□□□ -1.46
RBM17-204	ENST00000437845	ROMO1	P60602	79 aa		5.88	□□□□□ -1.47
RBM17-204	ENST00000437845	KRTAP5-3	Q6L8H2	238 aa		5.82	□□□□□ -1.48
RBM17-204	ENST00000437845	SYNE1	Q8NF91	8797 aa	Known RBP	5.8	□□□□□ -1.48
RBM17-204	ENST00000437845	KRTAP5-7	Q6L8G8	165 aa		5.72	□□□□□ -1.49
RBM17-204	ENST00000437845	KRTAP4-12	Q9BQ66	201 aa		5.66	□□□□□ -1.5
RBM17-204	ENST00000437845	MT1A	P04731	61 aa		5.64	□□□□□ -1.51
RBM17-204	ENST00000437845	KRTAP6-1	Q3LI64	71 aa		5.6	□□□□□ -1.51
RBM17-204	ENST00000437845	KRTAP9-6	A8MVA2	160 aa		5.58	□□□□□ -1.52
RBM17-204	ENST00000437845	KRTAP5-2	Q701N4	177 aa		5.51	□□□□□ -1.53
RBM17-204	ENST00000437845	PRO0628	Q9UI54	55 aa		5.49	□□□□□ -1.53
RBM17-204	ENST00000437845	KRTAP9-4	Q9BYQ2	154 aa		5.44	□□□□□ -1.54
RBM17-204	ENST00000437845	KRTAP4-11	Q9BYQ6	195 aa		5.43	□□□□□ -1.54
RBM17-204	ENST00000437845	KRTAP6-2	Q3LI66	62 aa		5.36	□□□□□ -1.55
RBM17-204	ENST00000437845	KRTAP9-9	Q9BYP9	154 aa		5.34	□□□□□ -1.55
RBM17-204	ENST00000437845	BRK1	Q8WUW1	75 aa		5.27	□□□□□ -1.57
RBM17-204	ENST00000437845	KRTAP5-8	O75690	187 aa		5.24	□□□□□ -1.57
RBM17-204	ENST00000437845	OBSCN	Q5VST9	7968 aa		5.21	□□□□□ -1.58
RBM17-204	ENST00000437845	PMAIP1	Q13794	54 aa		5.18	□□□□□ -1.58
RBM17-204	ENST00000437845	MT3	P25713	68 aa		5.16	□□□□□ -1.58
RBM17-204	ENST00000437845	AHNAK	Q09666	5890 aa	Known RBP	5.04	□□□□□ -1.6
RBM17-204	ENST00000437845	MUC5AC	P98088	5654 aa		5.03	□□□□□ -1.6
RBM17-204	ENST00000437845	MUC5B	Q9HC84	5762 aa	Predicted RBP	5.03	□□□□□ -1.6
RBM17-204	ENST00000437845	KTN1-AS1	Q86SY8	53 aa		5	□□□□□ -1.61
RBM17-204	ENST00000437845	KRTAP5-1	Q6L8H4	278 aa		4.94	□□□□□ -1.62
RBM17-204	ENST00000437845	KRTAP4-2	Q9BYR5	136 aa		4.76	□□□□□ -1.65
RBM17-204	ENST00000437845	LCE1E	Q5T753	118 aa		4.75	□□□□□ -1.65
RBM17-204	ENST00000437845	PRAC1	Q96KF2	57 aa		4.71	□□□□□ -1.66
RBM17-204	ENST00000437845	LCE1B	Q5T7P3	118 aa		4.46	□□□□□ -1.7
RBM17-204	ENST00000437845		A0A0A0MQY5	61 aa		4.43	□□□□□ -1.7
RBM17-204	ENST00000437845	LCE1C	Q5T751	118 aa		4.4	□□□□□ -1.71
RBM17-204	ENST00000437845	LCE3D	Q9BYE3	92 aa		4.26	□□□□□ -1.73
RBM17-204	ENST00000437845	LCE3E	Q5T5B0	92 aa		4	□□□□□ -1.77
RBM17-204	ENST00000437845	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4	□□□□□ -1.77
RBM17-204	ENST00000437845	KRTAP5-11	Q6L8G4	156 aa		3.99	□□□□□ -1.77
RBM17-204	ENST00000437845	NDUFAF8	A1L188	74 aa		3.98	□□□□□ -1.77
RBM17-204	ENST00000437845	LUZP6	Q538Z0	58 aa		3.98	□□□□□ -1.77
RBM17-204	ENST00000437845	LCE1F	Q5T754	118 aa		3.87	□□□□□ -1.79
RBM17-204	ENST00000437845	KRTAP21-2	Q3LI59	83 aa		3.69	□□□□□ -1.82
RBM17-204	ENST00000437845	PHGR1	C9JFL3	82 aa		3.46	□□□□□ -1.86
RBM17-204	ENST00000437845	INE1	O15225	51 aa		3.45	□□□□□ -1.86
RBM17-204	ENST00000437845	KRTAP4-4	Q9BYR3	166 aa		3.38	□□□□□ -1.87
RBM17-204	ENST00000437845	MUC19	Q7Z5P9	8384 aa		3.19	□□□□□ -1.9
RBM17-204	ENST00000437845	PRM1	P04553	51 aa		2.99	□□□□□ -1.93
RBM17-204	ENST00000437845	KRTAP21-1	Q3LI58	79 aa		2.64	□□□□□ -1.99
RBM17-204	ENST00000437845	MUC16	Q8WXI7	14507 aa		2.27	□□□□□ -2.05

Retrieved 78 of 20,778 RNA–protein pairs in 85.5 ms