RNA–Protein interactions for RNA: ENST00000437302.5

ITGB1-206, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-206ENST00000437302 MGAM2Q2M2H8 2515 aa1.04□□□□□ -2.24
ITGB1-206ENST00000437302 COX6B2Q6YFQ2 88 aa1.03□□□□□ -2.24
ITGB1-206ENST00000437302 C10orf95Q9H7T3 257 aa1.03□□□□□ -2.24
ITGB1-206ENST00000437302 FCGBPQ9Y6R7 5405 aaPredicted RBP1.02□□□□□ -2.25
ITGB1-206ENST00000437302 LRP2P98164 4655 aa1.01□□□□□ -2.25
ITGB1-206ENST00000437302 C9orf92A6NGG3 77 aa1.01□□□□□ -2.25
ITGB1-206ENST00000437302 BIRC6Q9NR09 4857 aa0.99□□□□□ -2.25
ITGB1-206ENST00000437302 RPS29P62273 56 aaKnown RBP0.99□□□□□ -2.25
ITGB1-206ENST00000437302 EPPK1P58107 5090 aaKnown RBP0.99□□□□□ -2.25
ITGB1-206ENST00000437302 KIAA1109Q2LD37 5005 aa0.99□□□□□ -2.25
ITGB1-206ENST00000437302 ABCA13Q86UQ4 5058 aa0.98□□□□□ -2.25
ITGB1-206ENST00000437302 S4R3F8 94 aa0.97□□□□□ -2.25
ITGB1-206ENST00000437302 SMR3BP02814 79 aaPredicted RBP0.96□□□□□ -2.26
ITGB1-206ENST00000437302 HERC2O95714 4834 aa0.94□□□□□ -2.26
ITGB1-206ENST00000437302 KRTAP19-2Q3LHN2 52 aa0.94□□□□□ -2.26
ITGB1-206ENST00000437302 MT1HL1P0DM35 61 aa0.93□□□□□ -2.26
ITGB1-206ENST00000437302 PCLOQ9Y6V0 5065 aa0.93□□□□□ -2.26
ITGB1-206ENST00000437302 HMCN2Q8NDA2 5059 aa0.92□□□□□ -2.26
ITGB1-206ENST00000437302 Q5VSD8 79 aa0.89□□□□□ -2.27
ITGB1-206ENST00000437302 UBR4Q5T4S7 5183 aa0.88□□□□□ -2.27
ITGB1-206ENST00000437302 M0QZ58 72 aa0.88□□□□□ -2.27
ITGB1-206ENST00000437302 RNF213Q63HN8 5207 aa0.86□□□□□ -2.27
ITGB1-206ENST00000437302 FAT4Q6V0I7 4981 aa0.85□□□□□ -2.27
ITGB1-206ENST00000437302 DMBT1Q9UGM3 2413 aaPredicted RBP0.85□□□□□ -2.27
ITGB1-206ENST00000437302 MUC2Q02817 5179 aa0.84□□□□□ -2.28
ITGB1-206ENST00000437302 KRTAP19-3Q7Z4W3 81 aa0.83□□□□□ -2.28
ITGB1-206ENST00000437302 AHNAKQ09666 5890 aaKnown RBP0.81□□□□□ -2.28
ITGB1-206ENST00000437302 SPRR2GQ9BYE4 73 aa0.8□□□□□ -2.28
ITGB1-206ENST00000437302 MT1FP04733 61 aa0.79□□□□□ -2.28
ITGB1-206ENST00000437302 MT1BP07438 61 aa0.79□□□□□ -2.28
ITGB1-206ENST00000437302 MT1XP80297 61 aa0.79□□□□□ -2.28
ITGB1-206ENST00000437302 KRTAP8-1Q8IUC2 63 aa0.79□□□□□ -2.28
ITGB1-206ENST00000437302 MUC5BQ9HC84 5762 aaPredicted RBP0.79□□□□□ -2.28
ITGB1-206ENST00000437302 MT2AP02795 61 aa0.78□□□□□ -2.28
ITGB1-206ENST00000437302 TNP1P09430 55 aa0.78□□□□□ -2.28
ITGB1-206ENST00000437302 KRTAP19-8Q3LI54 63 aa0.78□□□□□ -2.28
ITGB1-206ENST00000437302 MT1HP80294 61 aa0.77□□□□□ -2.29
ITGB1-206ENST00000437302 AHNAK2Q8IVF2 5795 aa0.75□□□□□ -2.29
ITGB1-206ENST00000437302 USH2AO75445 5202 aa0.74□□□□□ -2.29
ITGB1-206ENST00000437302 KRTAP2-3P0C7H8 128 aa0.74□□□□□ -2.29
ITGB1-206ENST00000437302 KRTAP2-4Q9BYR9 128 aa0.74□□□□□ -2.29
ITGB1-206ENST00000437302 KRTAP2-1Q9BYU5 128 aa0.74□□□□□ -2.29
ITGB1-206ENST00000437302 SSPOA2VEC9 5147 aa0.74□□□□□ -2.29
ITGB1-206ENST00000437302 KRTAP19-5Q3LI72 72 aa0.73□□□□□ -2.29
ITGB1-206ENST00000437302 KMT2DO14686 5537 aa0.72□□□□□ -2.29
ITGB1-206ENST00000437302 KRTAP19-7Q3SYF9 63 aa0.71□□□□□ -2.3
ITGB1-206ENST00000437302 KRTAP5-10Q6L8G5 202 aa0.7□□□□□ -2.3
ITGB1-206ENST00000437302 MT1LQ93083 61 aa0.67□□□□□ -2.3
ITGB1-206ENST00000437302 MT1EP04732 61 aa0.66□□□□□ -2.3
ITGB1-206ENST00000437302 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
ITGB1-206ENST00000437302 M0R2T5 61 aa0.65□□□□□ -2.31
ITGB1-206ENST00000437302 MUC12Q9UKN1 5478 aa0.63□□□□□ -2.31
ITGB1-206ENST00000437302 MT1GP13640 62 aa0.62□□□□□ -2.31
ITGB1-206ENST00000437302 MT1MQ8N339 61 aa0.62□□□□□ -2.31
ITGB1-206ENST00000437302 KRTAP6-1Q3LI64 71 aa0.59□□□□□ -2.31
ITGB1-206ENST00000437302 KRTAP19-6Q3LI70 58 aa0.59□□□□□ -2.31
ITGB1-206ENST00000437302 SYNE1Q8NF91 8797 aaKnown RBP0.58□□□□□ -2.32
ITGB1-206ENST00000437302 MT1AP04731 61 aa0.57□□□□□ -2.32
ITGB1-206ENST00000437302 PRM1P04553 51 aa0.56□□□□□ -2.32
ITGB1-206ENST00000437302 MDN1Q9NU22 5596 aa0.55□□□□□ -2.32
ITGB1-206ENST00000437302 KRTAP6-2Q3LI66 62 aa0.54□□□□□ -2.32
ITGB1-206ENST00000437302 KRTAP21-1Q3LI58 79 aa0.53□□□□□ -2.32
ITGB1-206ENST00000437302 MUC5ACP98088 5654 aa0.52□□□□□ -2.33
ITGB1-206ENST00000437302 SPRR2FQ96RM1 72 aa0.52□□□□□ -2.33
ITGB1-206ENST00000437302 SPRR2EP22531 72 aa0.47□□□□□ -2.33
ITGB1-206ENST00000437302 SPRR2AP35326 72 aa0.46□□□□□ -2.34
ITGB1-206ENST00000437302 GPR98Q8WXG9 6306 aa0.46□□□□□ -2.34
ITGB1-206ENST00000437302 SYNE2Q8WXH0 6885 aaKnown RBP0.45□□□□□ -2.34
ITGB1-206ENST00000437302 SPRR2BP35325 72 aa0.45□□□□□ -2.34
ITGB1-206ENST00000437302 SPRR2DP22532 72 aa0.44□□□□□ -2.34
ITGB1-206ENST00000437302 FSIP2Q5CZC0 6907 aa0.43□□□□□ -2.34
ITGB1-206ENST00000437302 KRTAP20-2Q3LI61 65 aa0.42□□□□□ -2.34
ITGB1-206ENST00000437302 DSTQ03001 7570 aaKnown RBP0.41□□□□□ -2.34
ITGB1-206ENST00000437302 MACF1Q9UPN3 7388 aaKnown RBP0.39□□□□□ -2.35
ITGB1-206ENST00000437302 PHGR1C9JFL3 82 aa0.38□□□□□ -2.35
ITGB1-206ENST00000437302 MT4P47944 62 aa0.38□□□□□ -2.35
ITGB1-206ENST00000437302 KRTAP20-1Q3LI63 56 aa0.35□□□□□ -2.35
ITGB1-206ENST00000437302 NEBP20929 6669 aa0.35□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 133.1 ms