RNA–Protein interactions for RNA: ENST00000436216.1

EXT1-202, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 3

Gene EXT1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-202ENST00000436216 MT1GP13640 62 aa4.48□□□□□ -1.69
EXT1-202ENST00000436216 UQCR11O14957 56 aa4.47□□□□□ -1.69
EXT1-202ENST00000436216 LCE3AQ5TA76 89 aa4.45□□□□□ -1.7
EXT1-202ENST00000436216 MT1LQ93083 61 aa4.42□□□□□ -1.7
EXT1-202ENST00000436216 PP632Q6XCG6 107 aa4.41□□□□□ -1.7
EXT1-202ENST00000436216 PSPHP1O15172 72 aa4.39□□□□□ -1.71
EXT1-202ENST00000436216 MT1MQ8N339 61 aa4.39□□□□□ -1.71
EXT1-202ENST00000436216 MIR22HGQ0VDD5 57 aa4.36□□□□□ -1.71
EXT1-202ENST00000436216 CDC42SE1Q9NRR8 79 aa4.33□□□□□ -1.72
EXT1-202ENST00000436216 H3BS24 57 aa4.32□□□□□ -1.72
EXT1-202ENST00000436216 PMAIP1Q13794 54 aa4.32□□□□□ -1.72
EXT1-202ENST00000436216 KRTAP12-3P60328 96 aa4.29□□□□□ -1.72
EXT1-202ENST00000436216 A6NED7 52 aa4.28□□□□□ -1.72
EXT1-202ENST00000436216 KRTAP4-9Q9BYQ8 210 aa4.28□□□□□ -1.72
EXT1-202ENST00000436216 KRTAP25-1Q3LHN0 102 aa4.27□□□□□ -1.73
EXT1-202ENST00000436216 KTN1-AS1Q86SY8 53 aa4.26□□□□□ -1.73
EXT1-202ENST00000436216 KRTAP4-3Q9BYR4 195 aa4.26□□□□□ -1.73
EXT1-202ENST00000436216 K7ERS5 55 aa4.25□□□□□ -1.73
EXT1-202ENST00000436216 LCE4AQ5TA78 99 aa4.23□□□□□ -1.73
EXT1-202ENST00000436216 LCE1DQ5T752 114 aa4.2□□□□□ -1.74
EXT1-202ENST00000436216 KRTAP5-4Q6L8H1 288 aa4.19□□□□□ -1.74
EXT1-202ENST00000436216 KRTAP4-7Q9BYR0 210 aa4.19□□□□□ -1.74
EXT1-202ENST00000436216 HMCN1Q96RW7 5635 aa4.18□□□□□ -1.74
EXT1-202ENST00000436216 GPR98Q8WXG9 6306 aa4.17□□□□□ -1.74
EXT1-202ENST00000436216 KRTAP23-1A1A580 65 aa4.15□□□□□ -1.75
EXT1-202ENST00000436216 MT4P47944 62 aa4.13□□□□□ -1.75
EXT1-202ENST00000436216 KRTAP19-4Q3LI73 84 aa4.11□□□□□ -1.75
EXT1-202ENST00000436216 LOC100996750A0A140TA64 210 aa4.06□□□□□ -1.76
EXT1-202ENST00000436216 KRTAP4-6Q9BYQ5 205 aa4.06□□□□□ -1.76
EXT1-202ENST00000436216 KRTAP5-5Q701N2 237 aaPredicted RBP4.05□□□□□ -1.76
EXT1-202ENST00000436216 KRTAP15-1Q3LI76 137 aa4.03□□□□□ -1.76
EXT1-202ENST00000436216 AHNAK2Q8IVF2 5795 aa4.01□□□□□ -1.77
EXT1-202ENST00000436216 ROMO1P60602 79 aa3.99□□□□□ -1.77
EXT1-202ENST00000436216 LCE3CQ5T5A8 94 aa3.97□□□□□ -1.77
EXT1-202ENST00000436216 SPRR5A0A1B0GTR4 108 aa3.93□□□□□ -1.78
EXT1-202ENST00000436216 PRAC1Q96KF2 57 aa3.93□□□□□ -1.78
EXT1-202ENST00000436216 KRTAP20-2Q3LI61 65 aa3.92□□□□□ -1.78
EXT1-202ENST00000436216 KRTAP5-10Q6L8G5 202 aa3.9□□□□□ -1.79
EXT1-202ENST00000436216 SYNE1Q8NF91 8797 aaKnown RBP3.89□□□□□ -1.79
EXT1-202ENST00000436216 KRTAP12-4P60329 112 aa3.89□□□□□ -1.79
EXT1-202ENST00000436216 KRTAP5-3Q6L8H2 238 aa3.83□□□□□ -1.8
EXT1-202ENST00000436216 A0A0A0MQY5 61 aa3.76□□□□□ -1.81
EXT1-202ENST00000436216 KRTAP9-6A8MVA2 160 aa3.76□□□□□ -1.81
EXT1-202ENST00000436216 MT1AP04731 61 aa3.76□□□□□ -1.81
EXT1-202ENST00000436216 KRTAP5-7Q6L8G8 165 aa3.74□□□□□ -1.81
EXT1-202ENST00000436216 KRTAP6-1Q3LI64 71 aa3.73□□□□□ -1.81
EXT1-202ENST00000436216 KRTAP5-2Q701N4 177 aa3.68□□□□□ -1.82
EXT1-202ENST00000436216 KRTAP9-4Q9BYQ2 154 aa3.64□□□□□ -1.83
EXT1-202ENST00000436216 KRTAP4-11Q9BYQ6 195 aa3.57□□□□□ -1.84
EXT1-202ENST00000436216 KRTAP6-2Q3LI66 62 aa3.55□□□□□ -1.84
EXT1-202ENST00000436216 KRTAP5-8O75690 187 aa3.46□□□□□ -1.86
EXT1-202ENST00000436216 MT3P25713 68 aa3.43□□□□□ -1.86
EXT1-202ENST00000436216 OBSCNQ5VST9 7968 aa3.43□□□□□ -1.86
EXT1-202ENST00000436216 KRTAP9-9Q9BYP9 154 aa3.37□□□□□ -1.87
EXT1-202ENST00000436216 NDUFAF8A1L188 74 aa3.32□□□□□ -1.88
EXT1-202ENST00000436216 KRTAP4-12Q9BQ66 201 aa3.3□□□□□ -1.88
EXT1-202ENST00000436216 KRTAP5-1Q6L8H4 278 aa3.29□□□□□ -1.88
EXT1-202ENST00000436216 MUC5ACP98088 5654 aa3.28□□□□□ -1.88
EXT1-202ENST00000436216 MUC5BQ9HC84 5762 aaPredicted RBP3.28□□□□□ -1.88
EXT1-202ENST00000436216 AHNAKQ09666 5890 aaKnown RBP3.27□□□□□ -1.89
EXT1-202ENST00000436216 LCE1EQ5T753 118 aa3.18□□□□□ -1.9
EXT1-202ENST00000436216 LUZP6Q538Z0 58 aa3.15□□□□□ -1.91
EXT1-202ENST00000436216 KRTAP4-2Q9BYR5 136 aa3.15□□□□□ -1.91
EXT1-202ENST00000436216 LCE1CQ5T751 118 aa2.94□□□□□ -1.94
EXT1-202ENST00000436216 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
EXT1-202ENST00000436216 LCE3DQ9BYE3 92 aa2.86□□□□□ -1.95
EXT1-202ENST00000436216 INE1O15225 51 aa2.84□□□□□ -1.95
EXT1-202ENST00000436216 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.7□□□□□ -1.98
EXT1-202ENST00000436216 LCE3EQ5T5B0 92 aa2.69□□□□□ -1.98
EXT1-202ENST00000436216 KRTAP5-11Q6L8G4 156 aa2.66□□□□□ -1.98
EXT1-202ENST00000436216 LCE1FQ5T754 118 aa2.58□□□□□ -2
EXT1-202ENST00000436216 KRTAP21-2Q3LI59 83 aa2.47□□□□□ -2.01
EXT1-202ENST00000436216 PHGR1C9JFL3 82 aa2.29□□□□□ -2.04
EXT1-202ENST00000436216 KRTAP4-4Q9BYR3 166 aa2.21□□□□□ -2.06
EXT1-202ENST00000436216 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
EXT1-202ENST00000436216 PRM1P04553 51 aa2.03□□□□□ -2.08
EXT1-202ENST00000436216 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
EXT1-202ENST00000436216 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 153.7 ms